Cow genome map
| Conread name: | rpgl10_d10.y1 |
| Conread position: | 1-173 |
| Cow position: | chr28:4138733-4138561 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 1-261 |
| Cow position: | chr28:20759768-20759484 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 1-262 |
| Cow position: | chr28:10606694-10606428 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 2-169 |
| Cow position: | chr28:17398291-17398130 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-169 |
| Cow position: | chr28:17414532-17414371 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 2-172 |
| Cow position: | chr28:16109871-16110046 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 23 |
| Conread position: | 2-172 |
| Cow position: | chr28:21380813-21380988 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 39, 161 |
| Conread position: | 2-173 |
| Cow position: | chr28:2898933-2899099 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 164, 33 |
| Conread position: | 2-173 |
| Cow position: | chr28:7372187-7372012 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 2-173 |
| Cow position: | chr28:8147927-8147754 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 128 |
| Conread position: | 2-173 |
| Cow position: | chr28:29434498-29434318 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2-173 |
| Cow position: | chr28:32174564-32174739 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 2-179 |
| Cow position: | chr28:16204394-16204219 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 162, 36 |
| Conread position: | 2-190 |
| Cow position: | chr28:18354389-18354200 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 2-192 |
| Cow position: | chr28:2752560-2752363 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 2-192 |
| Cow position: | chr28:7388832-7388639 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 2-195 |
| Cow position: | chr28:3161019-3160825 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 153 |
| Conread position: | 2-195 |
| Cow position: | chr28:27161393-27161193 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 41, 133 |
| Conread position: | 2-218 |
| Cow position: | chr28:9812210-9812435 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 210 |
| Conread position: | 2-225 |
| Cow position: | chr28:26103643-26103868 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 169, 43 |
| Conread position: | 2-227 |
| Cow position: | chr28:21598319-21598098 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 170 |
| Conread position: | 2-244 |
| Cow position: | chr28:13865777-13866015 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 2-246 |
| Cow position: | chr28:14997999-14998258 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-251 |
| Cow position: | chr28:7268009-7267750 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 2-255 |
| Cow position: | chr28:7156775-7157015 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-256 |
| Cow position: | chr28:25727305-25727572 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 93 |
| Conread position: | 2-258 |
| Cow position: | chr28:17012357-17012099 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 2-259 |
| Cow position: | chr28:30746793-30746531 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 20 |
| Conread position: | 2-260 |
| Cow position: | chr28:4823541-4823809 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 44, 53 |
| Conread position: | 2-261 |
| Cow position: | chr28:5931287-5931553 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 2-261 |
| Cow position: | chr28:11307573-11307308 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 166, 30 |
| Conread position: | 2-261 |
| Cow position: | chr28:19564297-19564026 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 212 |
| Conread position: | 2-261 |
| Cow position: | chr28:23007799-23007533 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 32, 175 |
| Conread position: | 2-261 |
| Cow position: | chr28:23410390-23410125 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 41, 210 |
| Conread position: | 2-262 |
| Cow position: | chr28:4013021-4013293 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 164, 212 |
| Conread position: | 2-262 |
| Cow position: | chr28:4070904-4071168 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 98, 137 |
| Conread position: | 2-262 |
| Cow position: | chr28:4643833-4643560 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 2-262 |
| Cow position: | chr28:4881302-4881039 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 47 |
| Conread position: | 2-262 |
| Cow position: | chr28:5826886-5827141 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 44, 144 |
| Conread position: | 2-262 |
| Cow position: | chr28:23724520-23724259 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 2-263 |
| Cow position: | chr28:10053398-10053121 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 39, 222 |
| Conread position: | 2-263 |
| Cow position: | chr28:26719285-26719541 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 226, 36 |
| Conread position: | 2-264 |
| Cow position: | chr28:3449236-3449523 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 35, 223 |
| Conread position: | 2-268 |
| Cow position: | chr28:3011338-3011052 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 28, 119 |
| Conread position: | 2-268 |
| Cow position: | chr28:13474235-13474515 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 40, 216 |
| Conread position: | 2-269 |
| Cow position: | chr28:9426417-9426134 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 215 |
| Conread position: | 2-270 |
| Cow position: | chr28:8787474-8787757 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 134 |
| Conread position: | 2-271 |
| Cow position: | chr28:3492850-3492568 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 92 |
| Conread position: | 2-271 |
| Cow position: | chr28:4016467-4016742 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 44, 106 |
| Conread position: | 2-271 |
| Cow position: | chr28:8291359-8291631 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 2-271 |
| Cow position: | chr28:9099869-9100150 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 109 |
| Conread position: | 2-271 |
| Cow position: | chr28:11426607-11426331 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 44, 209 |
| Conread position: | 2-272 |
| Cow position: | chr28:26982802-26982519 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 44, 216 |
| Conread position: | 2-274 |
| Cow position: | chr28:21844890-21845175 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 41 |
| Conread position: | 3-175 |
| Cow position: | chr28:24706839-24707006 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 3-190 |
| Cow position: | chr28:4765611-4765804 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 3-258 |
| Cow position: | chr28:32365778-32366024 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 3-262 |
| Cow position: | chr28:25249289-25249545 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 3-266 |
| Cow position: | chr28:7350593-7350862 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 162, 34 |
| Conread position: | 3-271 |
| Cow position: | chr28:25728135-25728396 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 4-155 |
| Cow position: | chr28:25283138-25283284 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 4-169 |
| Cow position: | chr28:26922430-26922263 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 4-171 |
| Cow position: | chr28:25677410-25677235 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 4-260 |
| Cow position: | chr28:5074573-5074313 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 4-271 |
| Cow position: | chr28:29416782-29416506 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 117 |
| Conread position: | 5-176 |
| Cow position: | chr28:30865355-30865527 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 108 |
| Conread position: | 5-276 |
| Cow position: | chr28:7619215-7618936 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 224 |
| Conread position: | 6-262 |
| Cow position: | chr28:5144581-5144304 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 37, 217 |
| Conread position: | 8-192 |
| Cow position: | chr28:20313215-20313410 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 8-228 |
| Cow position: | chr28:20397430-20397195 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 38, 212 |
| Conread position: | 8-252 |
| Cow position: | chr28:751171-751428 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 156, 29 |
| Conread position: | 8-255 |
| Cow position: | chr28:12672522-12672258 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 146, 215 |
| Conread position: | 8-256 |
| Cow position: | chr28:21502334-21502586 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 34, 170 |
| Conread position: | 8-257 |
| Cow position: | chr28:5236663-5236390 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 25, 218 |
| Conread position: | 8-257 |
| Cow position: | chr28:23530810-23531068 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 24, 205 |
| Conread position: | 8-263 |
| Cow position: | chr28:23296265-23296530 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 160, 233 |
| Conread position: | 8-264 |
| Cow position: | chr28:4307963-4307679 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 35, 220 |
| Conread position: | 9-169 |
| Cow position: | chr28:14933908-14934062 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 9-243 |
| Cow position: | chr28:26743566-26743822 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 32, 215 |
| Conread position: | 9-264 |
| Cow position: | chr28:11884578-11884319 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 202 |
| Conread position: | 9-266 |
| Cow position: | chr28:28765963-28765689 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 34, 213 |
| Conread position: | 10-172 |
| Cow position: | chr28:11818022-11817855 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 10-173 |
| Cow position: | chr28:5166709-5166877 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 10-244 |
| Cow position: | chr28:21363688-21363932 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 10-246 |
| Cow position: | chr28:12933788-12933542 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 10-257 |
| Cow position: | chr28:33322396-33322656 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 210 |
| Conread position: | 10-262 |
| Cow position: | chr28:16085266-16085529 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 174 |
| Conread position: | 10-264 |
| Cow position: | chr28:7698037-7697765 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 11-173 |
| Cow position: | chr28:8149682-8149522 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 155, 19 |
| Conread position: | 15-173 |
| Cow position: | chr28:17601605-17601444 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 19-253 |
| Cow position: | chr28:6059519-6059270 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 23-262 |
| Cow position: | chr28:3726258-3725998 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 199 |
| Conread position: | 23-271 |
| Cow position: | chr28:5235837-5236091 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 187 |
| Conread position: | 28-259 |
| Cow position: | chr28:23793350-23793113 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 28-264 |
| Cow position: | chr28:19015678-19015915 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 30-259 |
| Cow position: | chr28:8304212-8304449 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 33-261 |
| Cow position: | chr28:25056935-25057165 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 114, 12 |
| Conread position: | 33-264 |
| Cow position: | chr28:22500528-22500294 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 7 |
| Conread position: | 35-261 |
| Cow position: | chr28:31166012-31165791 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 200, 107 |
| Conread position: | 35-262 |
| Cow position: | chr28:15411669-15411891 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 37-261 |
| Cow position: | chr28:5193303-5193532 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 37-263 |
| Cow position: | chr28:8513508-8513297 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 82, 46 |
| Conread position: | 40-262 |
| Cow position: | chr28:10958768-10959009 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 42-260 |
| Cow position: | chr28:11743842-11743620 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 111, 48 |
| Conread position: | 42-262 |
| Cow position: | chr28:6283511-6283280 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 63 |
| Conread position: | 45-225 |
| Cow position: | chr28:555484-555666 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 120, 163 |
| Conread position: | 45-245 |
| Cow position: | chr28:4045829-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 22 |
| Conread position: | 45-251 |
| Cow position: | chr28:3408238-3408023 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 112, 89 |
| Conread position: | 45-252 |
| Cow position: | chr28:3023933-3023716 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 170 |
| Conread position: | 45-256 |
| Cow position: | chr28:2819755-2819969 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 116, 167 |
| Conread position: | 45-258 |
| Cow position: | chr28:12991116-12991341 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 168 |
| Conread position: | 45-260 |
| Cow position: | chr28:11987154-11987371 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 45-260 |
| Cow position: | chr28:12055392-12055609 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 45-260 |
| Cow position: | chr28:34248049-34247835 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 121, 158 |
| Conread position: | 45-262 |
| Cow position: | chr28:5437105-5436876 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 45-262 |
| Cow position: | chr28:21008685-21008461 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 45-264 |
| Cow position: | chr28:20124764-20124993 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 159 |
| Conread position: | 45-271 |
| Cow position: | chr28:5205251-5205468 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 73, 64 |
| Conread position: | 45-271 |
| Cow position: | chr28:11398817-11398574 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 120, 173 |
| Conread position: | 46-260 |
| Cow position: | chr28:4101501-4101720 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 152 |
| Conread position: | 46-260 |
| Cow position: | chr28:19216803-19217020 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 46-264 |
| Cow position: | chr28:5630079-5630313 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 119, 95 |
| Conread position: | 47-167 |
| Cow position: | chr28:19345232-19345352 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 65 |
| Conread position: | 47-255 |
| Cow position: | chr28:18770066-18770290 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 47-256 |
| Cow position: | chr28:17739807-17740029 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 47 |
| Conread position: | 47-257 |
| Cow position: | chr28:25763004-25763205 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 74, 122 |
| Conread position: | 47-259 |
| Cow position: | chr28:21046594-21046382 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 181, 119 |
| Conread position: | 48-256 |
| Cow position: | chr28:10615963-10615746 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 123, 169 |
| Conread position: | 48-260 |
| Cow position: | chr28:3143892-3143677 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 118, 53 |
| Conread position: | 49-163 |
| Cow position: | chr28:23834389-23834503 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-262 |
| Cow position: | chr28:30937677-30937473 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 56-262 |
| Cow position: | chr28:16214882-16214675 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 179, 118 |
| Conread position: | 57-271 |
| Cow position: | chr28:16919176-16918955 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 109, 61 |
| Conread position: | 59-256 |
| Cow position: | chr28:5805665-5805866 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 65-271 |
| Cow position: | chr28:21207368-21207157 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 86, 119 |
| Conread position: | 70-173 |
| Cow position: | chr28:16691928-16692033 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 70-262 |
| Cow position: | chr28:8681420-8681227 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 96, 11 |
| Conread position: | 78-262 |
| Cow position: | chr28:9109229-9109421 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 94, 137 |
| Conread position: | 81-225 |
| Cow position: | chr28:26530850-26530697 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 133 |
| Conread position: | 81-265 |
| Cow position: | chr28:11827704-11827903 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 84-272 |
| Cow position: | chr28:22085523-22085329 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 128 |
| Conread position: | 88-262 |
| Cow position: | chr28:3678385-3678569 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 127 |
| Conread position: | 97-262 |
| Cow position: | chr28:26960877-26960703 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 101-262 |
| Cow position: | chr28:9677705-9677873 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 67, 115 |
| Conread position: | 101-266 |
| Cow position: | chr28:8936186-8936362 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 115 |
| Conread position: | 103-262 |
| Cow position: | chr28:26574448-26574610 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 68, 107 |
| Conread position: | 106-264 |
| Cow position: | chr28:31996607-31996763 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 128, 88 |
| Conread position: | 109-261 |
| Cow position: | chr28:8616876-8617025 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 64 |
| Conread position: | 109-271 |
| Cow position: | chr28:32372289-32372456 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 115-271 |
| Cow position: | chr28:24238427-24238265 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 85 |
| Conread position: | 119-256 |
| Cow position: | chr28:12448283-12448423 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 93 |
Show alignments to all cow chromosomes.