Cow genome map
| Conread name: | rpgl10_d10.y1 |
| Conread position: | 1-256 |
| Cow position: | chr29:4120775-4121054 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 225 |
| Conread position: | 1-262 |
| Cow position: | chr29:23825595-23825866 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 211 |
| Conread position: | 2-115 |
| Cow position: | chr29:12004833-12004720 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 2-138 |
| Cow position: | chr29:2071645-2071505 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 2-161 |
| Cow position: | chr29:26319103-26319254 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 2-162 |
| Cow position: | chr29:41365040-41365199 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 44, 104 |
| Conread position: | 2-169 |
| Cow position: | chr29:694073-693912 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 2-169 |
| Cow position: | chr29:6015050-6015224 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 2-169 |
| Cow position: | chr29:11647017-11647192 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 74 |
| Conread position: | 2-169 |
| Cow position: | chr29:13373227-13373398 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 2-169 |
| Cow position: | chr29:22936198-22936368 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 2-169 |
| Cow position: | chr29:28868564-28868740 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 2-171 |
| Cow position: | chr29:11705051-11705211 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 17 |
| Conread position: | 2-173 |
| Cow position: | chr29:5210414-5210594 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 37, 120 |
| Conread position: | 2-173 |
| Cow position: | chr29:8004995-8004824 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 2-173 |
| Cow position: | chr29:11397996-11397823 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 2-173 |
| Cow position: | chr29:22175615-22175784 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 118, 42 |
| Conread position: | 2-174 |
| Cow position: | chr29:463730-463548 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 166 |
| Conread position: | 2-174 |
| Cow position: | chr29:22519202-22519026 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 2-174 |
| Cow position: | chr29:28166287-28166118 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 2-175 |
| Cow position: | chr29:31813876-31814041 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-192 |
| Cow position: | chr29:749982-749781 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 132 |
| Conread position: | 2-192 |
| Cow position: | chr29:2263069-2262869 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 2-192 |
| Cow position: | chr29:6286230-6286041 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 2-198 |
| Cow position: | chr29:19821215-19821410 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 2-201 |
| Cow position: | chr29:6293546-6293350 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 164, 39 |
| Conread position: | 2-202 |
| Cow position: | chr29:11053931-11053730 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 40, 101 |
| Conread position: | 2-207 |
| Cow position: | chr29:24578786-24578998 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 2-253 |
| Cow position: | chr29:24952616-24952882 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 131 |
| Conread position: | 2-257 |
| Cow position: | chr29:1325368-1325645 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 100 |
| Conread position: | 2-257 |
| Cow position: | chr29:11915748-11916020 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 107 |
| Conread position: | 2-257 |
| Cow position: | chr29:16309670-16309920 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 2-259 |
| Cow position: | chr29:19428587-19428851 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 44, 159 |
| Conread position: | 2-259 |
| Cow position: | chr29:40583721-40583986 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 96 |
| Conread position: | 2-260 |
| Cow position: | chr29:9912100-9912354 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 37, 165 |
| Conread position: | 2-260 |
| Cow position: | chr29:13486877-13487124 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 139 |
| Conread position: | 2-260 |
| Cow position: | chr29:22162325-22162062 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 208 |
| Conread position: | 2-260 |
| Cow position: | chr29:29769423-29769152 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 2-261 |
| Cow position: | chr29:12025542-12025276 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 39, 99 |
| Conread position: | 2-262 |
| Cow position: | chr29:6337589-6337854 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 184 |
| Conread position: | 2-262 |
| Cow position: | chr29:11434050-11434316 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 164, 41 |
| Conread position: | 2-262 |
| Cow position: | chr29:26017574-26017296 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 2-263 |
| Cow position: | chr29:6207992-6208246 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 2-263 |
| Cow position: | chr29:40891768-40891502 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 2-264 |
| Cow position: | chr29:25092040-25092310 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 2-264 |
| Cow position: | chr29:41530775-41531059 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 220 |
| Conread position: | 2-265 |
| Cow position: | chr29:32799780-32799496 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 2-268 |
| Cow position: | chr29:22778249-22777972 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 44, 114 |
| Conread position: | 2-269 |
| Cow position: | chr29:36952372-36952104 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 2-271 |
| Cow position: | chr29:29057107-29057392 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 2-299 |
| Cow position: | chr29:19250276-19250585 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 2-302 |
| Cow position: | chr29:35292016-35292332 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 214 |
| Conread position: | 3-192 |
| Cow position: | chr29:24252166-24252357 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 3-256 |
| Cow position: | chr29:28195584-28195335 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 174, 90 |
| Conread position: | 3-268 |
| Cow position: | chr29:4085248-4085507 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 194, 36 |
| Conread position: | 3-271 |
| Cow position: | chr29:10018505-10018782 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 3-271 |
| Cow position: | chr29:35458844-35458555 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 4-161 |
| Cow position: | chr29:868705-868864 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 4-164 |
| Cow position: | chr29:40633576-40633734 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 4-171 |
| Cow position: | chr29:26654110-26653945 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 4-173 |
| Cow position: | chr29:32926026-32926207 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 4-192 |
| Cow position: | chr29:40852859-40853050 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 4-271 |
| Cow position: | chr29:4520265-4520545 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 5-261 |
| Cow position: | chr29:19762201-19762466 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 5-262 |
| Cow position: | chr29:109628-109874 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 158, 83 |
| Conread position: | 6-160 |
| Cow position: | chr29:36830291-36830446 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 6-192 |
| Cow position: | chr29:40299082-40298894 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 162, 27 |
| Conread position: | 6-259 |
| Cow position: | chr29:43183378-43183116 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 160, 29 |
| Conread position: | 8-173 |
| Cow position: | chr29:7103489-7103661 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 8-173 |
| Cow position: | chr29:13372599-13372766 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 8-192 |
| Cow position: | chr29:17409269-17409459 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 8-192 |
| Cow position: | chr29:38580911-38581106 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 107 |
| Conread position: | 8-256 |
| Cow position: | chr29:5409206-5408944 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 8-256 |
| Cow position: | chr29:31489255-31489522 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 157, 213 |
| Conread position: | 8-257 |
| Cow position: | chr29:21196718-21196453 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 8-257 |
| Cow position: | chr29:22068812-22068542 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 215 |
| Conread position: | 8-257 |
| Cow position: | chr29:24292804-24293069 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 211 |
| Conread position: | 8-262 |
| Cow position: | chr29:356253-356509 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 8-271 |
| Cow position: | chr29:17222347-17222625 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 214 |
| Conread position: | 8-271 |
| Cow position: | chr29:18450201-18449926 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 32, 51 |
| Conread position: | 8-271 |
| Cow position: | chr29:30227339-30227068 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 160, 84 |
| Conread position: | 9-172 |
| Cow position: | chr29:32290543-32290710 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 10-170 |
| Cow position: | chr29:40994954-40994793 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 10-173 |
| Cow position: | chr29:13867276-13867107 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 10-192 |
| Cow position: | chr29:27926710-27926893 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 8, 90 |
| Conread position: | 10-254 |
| Cow position: | chr29:30713773-30713525 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 10-257 |
| Cow position: | chr29:31928921-31929185 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 124 |
| Conread position: | 10-262 |
| Cow position: | chr29:31092384-31092653 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 91 |
| Conread position: | 10-269 |
| Cow position: | chr29:37618237-37618520 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 33, 208 |
| Conread position: | 10-271 |
| Cow position: | chr29:23813102-23812837 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 206 |
| Conread position: | 11-250 |
| Cow position: | chr29:1011637-1011401 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 153, 30 |
| Conread position: | 11-264 |
| Cow position: | chr29:42630058-42630325 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 30, 203 |
| Conread position: | 11-266 |
| Cow position: | chr29:23697916-23698177 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 12-173 |
| Cow position: | chr29:25474858-25475026 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 15-171 |
| Cow position: | chr29:25088691-25088842 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 15-254 |
| Cow position: | chr29:5769735-5769990 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 200 |
| Conread position: | 15-272 |
| Cow position: | chr29:17236376-17236636 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 118 |
| Conread position: | 23-257 |
| Cow position: | chr29:19756383-19756636 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 201 |
| Conread position: | 25-271 |
| Cow position: | chr29:35258933-35259191 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 21, 196 |
| Conread position: | 30-256 |
| Cow position: | chr29:3685560-3685323 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 30-262 |
| Cow position: | chr29:38754979-38754733 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 30-271 |
| Cow position: | chr29:22028996-22028749 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 31-267 |
| Cow position: | chr29:7310635-7310872 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 32-262 |
| Cow position: | chr29:5616908-5616683 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 203, 141 |
| Conread position: | 33-225 |
| Cow position: | chr29:17154741-17154926 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 34-255 |
| Cow position: | chr29:24604174-24603956 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 144, 123 |
| Conread position: | 35-255 |
| Cow position: | chr29:28066454-28066677 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 131, 74 |
| Conread position: | 37-276 |
| Cow position: | chr29:32656127-32655876 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 180 |
| Conread position: | 39-246 |
| Cow position: | chr29:4423472-4423262 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 138 |
| Conread position: | 40-170 |
| Cow position: | chr29:19559051-19558920 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 40-256 |
| Cow position: | chr29:5520517-5520286 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 125, 177 |
| Conread position: | 40-262 |
| Cow position: | chr29:25737446-25737216 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 126, 178 |
| Conread position: | 40-271 |
| Cow position: | chr29:16609716-16609964 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 122, 177 |
| Conread position: | 41-268 |
| Cow position: | chr29:28979530-28979307 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 42-192 |
| Cow position: | chr29:30918519-30918669 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-256 |
| Cow position: | chr29:396383-396600 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 124, 54 |
| Conread position: | 42-271 |
| Cow position: | chr29:5788998-5789228 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 45-192 |
| Cow position: | chr29:16365915-16365761 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 45-256 |
| Cow position: | chr29:36357102-36357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 45-260 |
| Cow position: | chr29:22167105-22166885 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 119, 162 |
| Conread position: | 45-260 |
| Cow position: | chr29:31934352-31934578 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 123, 166 |
| Conread position: | 45-261 |
| Cow position: | chr29:22613403-22613624 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 109, 164 |
| Conread position: | 45-262 |
| Cow position: | chr29:7624152-7624369 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 149, 81 |
| Conread position: | 45-262 |
| Cow position: | chr29:16278961-16279181 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 45-264 |
| Cow position: | chr29:4070601-4070827 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 45-265 |
| Cow position: | chr29:22720678-22720441 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 45-270 |
| Cow position: | chr29:23389580-23389357 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 45-271 |
| Cow position: | chr29:17109933-17110164 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 126, 52 |
| Conread position: | 45-271 |
| Cow position: | chr29:24188092-24187851 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 120, 173 |
| Conread position: | 45-271 |
| Cow position: | chr29:31981804-31982035 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 123, 148 |
| Conread position: | 45-271 |
| Cow position: | chr29:35501681-35501454 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 121, 162 |
| Conread position: | 46-245 |
| Cow position: | chr29:40791284-40791484 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 50 |
| Conread position: | 46-258 |
| Cow position: | chr29:27816328-27816536 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 134, 50 |
| Conread position: | 46-259 |
| Cow position: | chr29:8686304-8686511 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 182, 125 |
| Conread position: | 46-263 |
| Cow position: | chr29:18203411-18203203 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 46-271 |
| Cow position: | chr29:9310574-9310817 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 120, 170 |
| Conread position: | 47-262 |
| Cow position: | chr29:6636060-6636282 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 47-271 |
| Cow position: | chr29:32307576-32307352 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 48-262 |
| Cow position: | chr29:31651387-31651606 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 70, 120 |
| Conread position: | 48-271 |
| Cow position: | chr29:32733275-32733518 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 120, 164 |
| Conread position: | 51-252 |
| Cow position: | chr29:34832406-34832199 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 107, 55 |
| Conread position: | 54-271 |
| Cow position: | chr29:9378619-9378846 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 112, 163 |
| Conread position: | 55-173 |
| Cow position: | chr29:24051398-24051279 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 113, 83 |
| Conread position: | 55-258 |
| Cow position: | chr29:19176930-19176715 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 71, 162 |
| Conread position: | 57-245 |
| Cow position: | chr29:39111326-39111137 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 119, 79 |
| Conread position: | 59-227 |
| Cow position: | chr29:23825223-23825046 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 155 |
| Conread position: | 59-246 |
| Cow position: | chr29:4053353-4053156 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 112, 153 |
| Conread position: | 61-268 |
| Cow position: | chr29:19363700-19363919 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 51 |
| Conread position: | 66-264 |
| Cow position: | chr29:10318592-10318792 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 128, 107 |
| Conread position: | 72-261 |
| Cow position: | chr29:19420613-19420417 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 139 |
| Conread position: | 73-169 |
| Cow position: | chr29:39285496-39285592 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 76-260 |
| Cow position: | chr29:21012338-21012163 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 93-261 |
| Cow position: | chr29:10203793-10203972 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 120 |
| Conread position: | 95-271 |
| Cow position: | chr29:22652346-22652532 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 115 |
| Conread position: | 102-263 |
| Cow position: | chr29:5064805-5064969 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 109 |
| Conread position: | 103-259 |
| Cow position: | chr29:37293067-37293228 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 104 |
| Conread position: | 126-282 |
| Cow position: | chr29:27881896-27882066 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 131-256 |
| Cow position: | chr29:9149479-9149352 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 35, 74 |
Show alignments to all cow chromosomes.