Cow genome map

Conread name: rpgl10_d10.y1

Conread position: 1-152
Cow position: chr3:74878684-74878531 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 126
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 1-173
Cow position: chr3:10103951-10104121 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 165, 34

Conread position: 1-173
Cow position: chr3:12712013-12711834 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 1-195
Cow position: chr3:19404210-19404401 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 127

Conread position: 1-198
Cow position: chr3:38347098-38347297 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 102

Conread position: 1-201
Cow position: chr3:43726981-43727196 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 1-255
Cow position: chr3:39996982-39996720 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 14

Conread position: 1-256
Cow position: chr3:37041319-37041591 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 223

Conread position: 1-260
Cow position: chr3:12978711-12978436 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 217

Conread position: 1-262
Cow position: chr3:25477718-25477973 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 177, 37

Conread position: 1-355
Cow position: chr3:7337879-7337513 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 247
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 129

Conread position: 2-135
Cow position: chr3:22820474-22820612 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 119

Conread position: 2-148
Cow position: chr3:67929355-67929206 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 56

Conread position: 2-155
Cow position: chr3:73759610-73759456 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 109

Conread position: 2-162
Cow position: chr3:20437746-20437588 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 2-168
Cow position: chr3:3638093-3638253 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 164, 85

Conread position: 2-169
Cow position: chr3:27727924-27727756 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 40, 16

Conread position: 2-169
Cow position: chr3:79292735-79292904 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 33

Conread position: 2-171
Cow position: chr3:70401807-70401973 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 2-171
Cow position: chr3:72675998-72676168 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 2-172
Cow position: chr3:59621741-59621569 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 44, 0

Conread position: 2-172
Cow position: chr3:61840182-61840354 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 100

Conread position: 2-173
Cow position: chr3:5100861-5100691 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 164, 42

Conread position: 2-173
Cow position: chr3:27940237-27940062 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 91

Conread position: 2-173
Cow position: chr3:38691501-38691325 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 2-173
Cow position: chr3:46901103-46901278 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 71, 39

Conread position: 2-173
Cow position: chr3:63269128-63269303 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-173
Cow position: chr3:67930277-67930106 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 38, 101

Conread position: 2-173
Cow position: chr3:74502414-74502244 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 21

Conread position: 2-174
Cow position: chr3:59588425-59588592 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 166, 30

Conread position: 2-186
Cow position: chr3:31771592-31771771 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 40

Conread position: 2-191
Cow position: chr3:5097112-5097307 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 2-192
Cow position: chr3:59884166-59883968 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 39, 0

Conread position: 2-192
Cow position: chr3:67704448-67704646 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 2-192
Cow position: chr3:80581570-80581759 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 49

Conread position: 2-198
Cow position: chr3:34669821-34669626 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 75

Conread position: 2-198
Cow position: chr3:58767165-58767369 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 0

Conread position: 2-204
Cow position: chr3:8733443-8733245 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 20

Conread position: 2-205
Cow position: chr3:63179768-63179982 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 20

Conread position: 2-225
Cow position: chr3:35621208-35621436 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 89

Conread position: 2-227
Cow position: chr3:70334789-70334549 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 44, 218

Conread position: 2-238
Cow position: chr3:16254926-16254700 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 40

Conread position: 2-243
Cow position: chr3:7566519-7566259 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 219

Conread position: 2-245
Cow position: chr3:59000846-59000599 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 44, 19

Conread position: 2-251
Cow position: chr3:55124378-55124115 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 44, 217

Conread position: 2-252
Cow position: chr3:75158265-75158526 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 70

Conread position: 2-255
Cow position: chr3:4319617-4319893 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 41, 0

Conread position: 2-256
Cow position: chr3:28908298-28908041 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 2-256
Cow position: chr3:73395027-73395290 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 166, 32

Conread position: 2-257
Cow position: chr3:51578415-51578147 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 198

Conread position: 2-257
Cow position: chr3:65019960-65019676 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 40, 220

Conread position: 2-258
Cow position: chr3:8393257-8393516 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 39, 17

Conread position: 2-258
Cow position: chr3:18067041-18067307 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 94

Conread position: 2-258
Cow position: chr3:29360240-29359987 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 42, 106

Conread position: 2-258
Cow position: chr3:50614543-50614800 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 41, 175

Conread position: 2-258
Cow position: chr3:52652176-52651903 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 217

Conread position: 2-259
Cow position: chr3:51234190-51233926 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 95

Conread position: 2-259
Cow position: chr3:57764133-57764391 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 164, 38

Conread position: 2-259
Cow position: chr3:73298992-73299244 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 164, 41

Conread position: 2-260
Cow position: chr3:8393842-8394092 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 174

Conread position: 2-260
Cow position: chr3:15052046-15051773 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 115

Conread position: 2-260
Cow position: chr3:22221225-22221505 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 213
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 112

Conread position: 2-260
Cow position: chr3:65413374-65413087 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 220

Conread position: 2-260
Cow position: chr3:76713418-76713133 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 90

Conread position: 2-261
Cow position: chr3:5374238-5374489 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 100

Conread position: 2-261
Cow position: chr3:21081470-21081200 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 133

Conread position: 2-261
Cow position: chr3:45881809-45882079 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 40

Conread position: 2-261
Cow position: chr3:58318048-58317763 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 226

Conread position: 2-261
Cow position: chr3:58540621-58540337 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 87, 127

Conread position: 2-261
Cow position: chr3:58765173-58764906 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 171

Conread position: 2-262
Cow position: chr3:3818700-3818945 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 76

Conread position: 2-262
Cow position: chr3:3985233-3985497 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 93

Conread position: 2-262
Cow position: chr3:4050100-4050357 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 44, 75

Conread position: 2-262
Cow position: chr3:8349650-8349390 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 102, 35

Conread position: 2-262
Cow position: chr3:17235304-17235023 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 92, 38

Conread position: 2-262
Cow position: chr3:34871470-34871749 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 39, 140

Conread position: 2-262
Cow position: chr3:59597089-59597354 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 60

Conread position: 2-262
Cow position: chr3:65969067-65969355 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 228

Conread position: 2-262
Cow position: chr3:67744721-67744460 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 60, 43

Conread position: 2-262
Cow position: chr3:71238062-71238330 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 166, 121

Conread position: 2-262
Cow position: chr3:73764290-73764034 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 206
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 82

Conread position: 2-262
Cow position: chr3:77082121-77081853 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 208

Conread position: 2-262
Cow position: chr3:80740469-80740734 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 83

Conread position: 2-263
Cow position: chr3:2393057-2392787 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 88

Conread position: 2-263
Cow position: chr3:23169161-23168885 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 79

Conread position: 2-263
Cow position: chr3:23471561-23471281 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 40, 219

Conread position: 2-263
Cow position: chr3:57273971-57274241 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 124, 22

Conread position: 2-263
Cow position: chr3:59333676-59333941 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 44, 110

Conread position: 2-263
Cow position: chr3:71497238-71496947 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 230

Conread position: 2-264
Cow position: chr3:3656419-3656701 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 39, 220

Conread position: 2-264
Cow position: chr3:5365583-5365848 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 2-264
Cow position: chr3:48241522-48241791 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 40, 67

Conread position: 2-264
Cow position: chr3:65058607-65058881 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 2-265
Cow position: chr3:2506570-2506292 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 80, 43

Conread position: 2-265
Cow position: chr3:15751815-15751539 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 81

Conread position: 2-268
Cow position: chr3:77582015-77582293 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 97

Conread position: 2-270
Cow position: chr3:48362982-48363258 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 86

Conread position: 2-270
Cow position: chr3:60389673-60389941 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 25

Conread position: 2-270
Cow position: chr3:71231304-71231587 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 108

Conread position: 2-271
Cow position: chr3:1517607-1517322 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 23

Conread position: 2-271
Cow position: chr3:15443824-15443538 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 88

Conread position: 2-271
Cow position: chr3:17134244-17134517 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 18

Conread position: 2-271
Cow position: chr3:18686813-18687091 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 209

Conread position: 2-271
Cow position: chr3:23920523-23920237 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 107

Conread position: 2-271
Cow position: chr3:74234096-74234370 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 40, 56

Conread position: 2-271
Cow position: chr3:83490992-83491270 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 134

Conread position: 2-273
Cow position: chr3:75080673-75080944 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 169, 33

Conread position: 2-275
Cow position: chr3:54506609-54506899 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 222

Conread position: 2-282
Cow position: chr3:3649312-3649037 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 227, 38

Conread position: 2-334
Cow position: chr3:54100815-54100463 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 40

Conread position: 3-166
Cow position: chr3:52863277-52863112 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 3-192
Cow position: chr3:57624371-57624566 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 31, 0

Conread position: 3-256
Cow position: chr3:17936934-17936672 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 39, 18

Conread position: 3-261
Cow position: chr3:59474026-59474300 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 219

Conread position: 3-262
Cow position: chr3:44625257-44624998 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 177
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 117

Conread position: 3-271
Cow position: chr3:9641472-9641745 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 173

Conread position: 4-164
Cow position: chr3:80468768-80468608 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 44, 131

Conread position: 4-171
Cow position: chr3:17895750-17895925 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 39, 149

Conread position: 4-172
Cow position: chr3:24935278-24935443 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 4-175
Cow position: chr3:35852567-35852391 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 173

Conread position: 4-194
Cow position: chr3:80053631-80053438 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 162, 106

Conread position: 4-255
Cow position: chr3:35153523-35153780 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 37, 46

Conread position: 4-262
Cow position: chr3:64281024-64280757 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 4-264
Cow position: chr3:14601804-14601528 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 40, 222

Conread position: 4-270
Cow position: chr3:58527301-58527568 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 162, 41

Conread position: 5-212
Cow position: chr3:53739277-53739066 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 204

Conread position: 5-244
Cow position: chr3:53046754-53046495 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 98

Conread position: 5-257
Cow position: chr3:58973202-58973452 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 168

Conread position: 5-259
Cow position: chr3:24872623-24872869 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 60

Conread position: 5-262
Cow position: chr3:26904019-26904280 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 106

Conread position: 5-266
Cow position: chr3:76268070-76267789 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 221

Conread position: 6-166
Cow position: chr3:78896557-78896719 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 6-253
Cow position: chr3:14546909-14547171 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 11, 140

Conread position: 6-253
Cow position: chr3:74846802-74846553 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 35, 170

Conread position: 6-257
Cow position: chr3:15228911-15228665 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 199

Conread position: 6-262
Cow position: chr3:31350196-31349928 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 44

Conread position: 6-262
Cow position: chr3:71246934-71247194 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 110

Conread position: 8-166
Cow position: chr3:27697065-27696907 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 137

Conread position: 8-169
Cow position: chr3:28898310-28898148 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 8-169
Cow position: chr3:81277559-81277392 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 35, 0

Conread position: 8-173
Cow position: chr3:37599515-37599347 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 8-173
Cow position: chr3:53704055-53703883 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 8-175
Cow position: chr3:5366682-5366848 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 98

Conread position: 8-218
Cow position: chr3:73708959-73709181 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 36, 209

Conread position: 8-227
Cow position: chr3:44101883-44102110 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 97, 37

Conread position: 8-227
Cow position: chr3:84250633-84250406 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 100

Conread position: 8-253
Cow position: chr3:17058629-17058375 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 158, 52

Conread position: 8-256
Cow position: chr3:53910024-53910281 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 14

Conread position: 8-257
Cow position: chr3:24468467-24468208 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 32, 38

Conread position: 8-257
Cow position: chr3:72342156-72342424 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 30, 213

Conread position: 8-260
Cow position: chr3:39873786-39873529 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 15, 85

Conread position: 8-262
Cow position: chr3:3032317-3032590 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 92

Conread position: 8-262
Cow position: chr3:48810727-48810457 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 12

Conread position: 8-262
Cow position: chr3:70334052-70333788 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 40, 207

Conread position: 8-262
Cow position: chr3:76024427-76024684 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 30

Conread position: 8-264
Cow position: chr3:210228-210507 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 215

Conread position: 8-265
Cow position: chr3:18059613-18059890 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 36, 17

Conread position: 8-265
Cow position: chr3:31225350-31225605 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 27

Conread position: 8-266
Cow position: chr3:55970418-55970699 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 218

Conread position: 8-268
Cow position: chr3:56476590-56476859 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 205

Conread position: 8-269
Cow position: chr3:23804428-23804691 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 8-271
Cow position: chr3:2850982-2850740 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 14

Conread position: 8-271
Cow position: chr3:18459609-18459351 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 163, 27

Conread position: 9-153
Cow position: chr3:74900726-74900581 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 9-173
Cow position: chr3:72503986-72503815 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 9-189
Cow position: chr3:57760412-57760597 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 41, 0

Conread position: 9-258
Cow position: chr3:53904377-53904612 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 9-262
Cow position: chr3:68586933-68587201 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 35, 106

Conread position: 10-252
Cow position: chr3:83988444-83988705 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 42, 126

Conread position: 10-262
Cow position: chr3:40100795-40100548 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 219, 28

Conread position: 10-262
Cow position: chr3:51609273-51609002 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 76

Conread position: 10-264
Cow position: chr3:55318989-55318713 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 212

Conread position: 10-265
Cow position: chr3:37186740-37186993 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 8

Conread position: 10-271
Cow position: chr3:48252798-48253069 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 14

Conread position: 11-190
Cow position: chr3:23667537-23667720 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 11-191
Cow position: chr3:17935025-17934836 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 11-255
Cow position: chr3:20802709-20802466 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 71

Conread position: 12-266
Cow position: chr3:59392201-59391939 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 115

Conread position: 15-205
Cow position: chr3:11606237-11606429 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 29

Conread position: 18-163
Cow position: chr3:52147729-52147582 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 19-153
Cow position: chr3:45222233-45222092 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 19-255
Cow position: chr3:51033290-51033546 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 204

Conread position: 19-264
Cow position: chr3:27976604-27976345 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 196

Conread position: 24-173
Cow position: chr3:55085246-55085088 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 25-227
Cow position: chr3:19793664-19793447 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 114

Conread position: 28-261
Cow position: chr3:39248091-39247852 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 185

Conread position: 29-277
Cow position: chr3:20841939-20841681 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 166

Conread position: 29-278
Cow position: chr3:15861930-15862191 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 189

Conread position: 30-174
Cow position: chr3:56704387-56704239 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 30-254
Cow position: chr3:83845851-83846064 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 82

Conread position: 30-256
Cow position: chr3:56949151-56948921 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 138, 5

Conread position: 30-262
Cow position: chr3:3036989-3036760 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 27, 10

Conread position: 30-262
Cow position: chr3:23203295-23203048 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 135, 112

Conread position: 31-175
Cow position: chr3:66900795-66900653 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 31-262
Cow position: chr3:41550438-41550213 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 15, 112

Conread position: 32-261
Cow position: chr3:48072943-48072706 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 13

Conread position: 33-262
Cow position: chr3:525287-525507 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 34-175
Cow position: chr3:61467251-61467110 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 138

Conread position: 34-181
Cow position: chr3:22871903-22871756 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 34-264
Cow position: chr3:46792325-46792568 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 174

Conread position: 35-173
Cow position: chr3:64373214-64373075 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 7

Conread position: 36-261
Cow position: chr3:37485854-37485639 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 217, 77

Conread position: 36-262
Cow position: chr3:40213090-40212854 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 126, 9

Conread position: 37-252
Cow position: chr3:49996780-49996546 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 184

Conread position: 38-263
Cow position: chr3:69650945-69650716 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 177

Conread position: 40-192
Cow position: chr3:28258041-28258195 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 114

Conread position: 40-257
Cow position: chr3:31309407-31309178 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 125, 5

Conread position: 40-271
Cow position: chr3:55712386-55712623 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 0

Conread position: 42-173
Cow position: chr3:11292300-11292167 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 112
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 42-262
Cow position: chr3:45211249-45211486 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 176

Conread position: 42-271
Cow position: chr3:2648562-2648318 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 175

Conread position: 42-271
Cow position: chr3:16107409-16107186 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 126, 63

Conread position: 42-275
Cow position: chr3:26792422-26792647 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 59

Conread position: 43-264
Cow position: chr3:2025145-2025387 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 179

Conread position: 45-169
Cow position: chr3:21997837-21997713 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 45-170
Cow position: chr3:21641939-21642064 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 56

Conread position: 45-176
Cow position: chr3:33329768-33329899 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 45-177
Cow position: chr3:80072080-80072212 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 45-192
Cow position: chr3:7427953-7428100 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 121, 55

Conread position: 45-227
Cow position: chr3:76932152-76931973 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 129, 57

Conread position: 45-252
Cow position: chr3:10958289-10958073 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 169

Conread position: 45-256
Cow position: chr3:11281717-11281944 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 120, 173

Conread position: 45-256
Cow position: chr3:73335235-73335454 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 118, 171

Conread position: 45-257
Cow position: chr3:75173629-75173424 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 45-257
Cow position: chr3:75853374-75853159 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 27

Conread position: 45-260
Cow position: chr3:71423600-71423390 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 0

Conread position: 45-266
Cow position: chr3:13329822-13329608 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 42

Conread position: 46-253
Cow position: chr3:64010857-64010636 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 21

Conread position: 46-259
Cow position: chr3:73467582-73467804 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 61

Conread position: 46-271
Cow position: chr3:53384328-53384088 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 121, 163

Conread position: 46-276
Cow position: chr3:5040355-5040107 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 59

Conread position: 47-169
Cow position: chr3:57877519-57877641 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 47-257
Cow position: chr3:18393441-18393224 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 63

Conread position: 47-262
Cow position: chr3:5703131-5703357 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 172

Conread position: 47-262
Cow position: chr3:81234342-81234569 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 119, 167

Conread position: 47-264
Cow position: chr3:15153644-15153872 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 165

Conread position: 48-190
Cow position: chr3:67959962-67959822 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 39

Conread position: 48-257
Cow position: chr3:14465752-14465539 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 120, 164

Conread position: 48-258
Cow position: chr3:19792859-19793074 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 93

Conread position: 48-260
Cow position: chr3:48900378-48900151 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 53

Conread position: 48-262
Cow position: chr3:11229411-11229190 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 167

Conread position: 48-268
Cow position: chr3:74644511-74644746 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 38

Conread position: 49-255
Cow position: chr3:23753455-23753658 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 116, 38

Conread position: 49-260
Cow position: chr3:52456873-52457088 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 103, 48

Conread position: 49-271
Cow position: chr3:59828438-59828209 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 0

Conread position: 50-261
Cow position: chr3:15973522-15973749 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 173
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 169

Conread position: 52-258
Cow position: chr3:54905576-54905784 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 45

Conread position: 52-264
Cow position: chr3:35624586-35624358 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 7

Conread position: 53-260
Cow position: chr3:31804807-31804591 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 158

Conread position: 53-261
Cow position: chr3:79094082-79093881 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 56-175
Cow position: chr3:8814150-8814032 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 56-260
Cow position: chr3:76155951-76156165 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 8

Conread position: 57-264
Cow position: chr3:54982116-54981908 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 64

Conread position: 57-271
Cow position: chr3:44961041-44960829 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 165, 19

Conread position: 58-257
Cow position: chr3:14518115-14517905 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 148

Conread position: 62-262
Cow position: chr3:76269860-76270069 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 104, 79

Conread position: 65-262
Cow position: chr3:78071821-78071611 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 153

Conread position: 67-252
Cow position: chr3:22734291-22734090 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 20

Conread position: 67-264
Cow position: chr3:22092122-22092308 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 70-272
Cow position: chr3:75966805-75966591 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 35

Conread position: 73-257
Cow position: chr3:985993-986191 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 143

Conread position: 73-264
Cow position: chr3:70402623-70402821 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 56

Conread position: 73-316
Cow position: chr3:43389149-43388892 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 144

Conread position: 74-247
Cow position: chr3:62312776-62312964 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 46

Conread position: 74-247
Cow position: chr3:62370035-62370223 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 46

Conread position: 76-259
Cow position: chr3:6900897-6901074 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 93

Conread position: 76-261
Cow position: chr3:26783525-26783327 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 56

Conread position: 76-261
Cow position: chr3:59681922-59681727 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 136

Conread position: 76-262
Cow position: chr3:8526382-8526198 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 36

Conread position: 76-262
Cow position: chr3:50350987-50350797 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 48, 130

Conread position: 77-263
Cow position: chr3:54557657-54557848 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 87, 119

Conread position: 78-271
Cow position: chr3:31115286-31115089 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 132

Conread position: 80-258
Cow position: chr3:23640329-23640516 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 134

Conread position: 84-250
Cow position: chr3:6579478-6579649 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 28

Conread position: 84-262
Cow position: chr3:55730480-55730285 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 5, 135

Conread position: 85-257
Cow position: chr3:37641316-37641502 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 131

Conread position: 88-257
Cow position: chr3:5900115-5900287 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 69, 125

Conread position: 88-262
Cow position: chr3:3164116-3163934 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 137

Conread position: 96-261
Cow position: chr3:12637511-12637684 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 70, 114

Conread position: 102-262
Cow position: chr3:53249501-53249666 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 64, 25

Conread position: 105-260
Cow position: chr3:2630785-2630939 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 107-248
Cow position: chr3:53552967-53552817 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 101

Conread position: 109-264
Cow position: chr3:31489734-31489891 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 78

Conread position: 115-262
Cow position: chr3:22903732-22903577 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 98

Conread position: 129-271
Cow position: chr3:24370436-24370578 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 37, 82

Conread position: 172-260
Cow position: chr3:39812151-39812238 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 78
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.