Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-318 |
| Cow position: | chr10:12315195-12314894 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 85, 19 |
| Conread position: | 2-205 |
| Cow position: | chr10:16986378-16986171 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 4-216 |
| Cow position: | chr10:2202075-2202294 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 141 |
| Conread position: | 4-248 |
| Cow position: | chr10:39303802-39304059 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-268 |
| Cow position: | chr10:28152334-28152610 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 120 |
| Conread position: | 4-298 |
| Cow position: | chr10:29252208-29251907 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 4-300 |
| Cow position: | chr10:60960979-60960683 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 4-303 |
| Cow position: | chr10:48257233-48257539 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 4-306 |
| Cow position: | chr10:3998950-3998642 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-313 |
| Cow position: | chr10:51306385-51306057 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 28, 44 |
| Conread position: | 4-317 |
| Cow position: | chr10:19372292-19372602 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 4-317 |
| Cow position: | chr10:28105035-28105347 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 141 |
| Conread position: | 4-318 |
| Cow position: | chr10:17176076-17175758 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 53, 29 |
| Conread position: | 4-319 |
| Cow position: | chr10:15871828-15872138 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 51, 104 |
| Conread position: | 4-319 |
| Cow position: | chr10:20132484-20132803 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-319 |
| Cow position: | chr10:23912468-23912772 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 170, 29 |
| Conread position: | 4-319 |
| Cow position: | chr10:29279490-29279169 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 4-319 |
| Cow position: | chr10:40107145-40106841 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 4-319 |
| Cow position: | chr10:43438918-43438594 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 28, 7 |
| Conread position: | 4-319 |
| Cow position: | chr10:48462299-48462617 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 29 |
| Conread position: | 4-319 |
| Cow position: | chr10:54477146-54476836 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 4-319 |
| Cow position: | chr10:59588131-59588441 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 8, 87 |
| Conread position: | 4-320 |
| Cow position: | chr10:2613411-2613104 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 30, 16 |
| Conread position: | 4-322 |
| Cow position: | chr10:2449395-2449073 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 5-308 |
| Cow position: | chr10:57059238-57059546 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 6-300 |
| Cow position: | chr10:22341620-22341308 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 6-308 |
| Cow position: | chr10:52113631-52113930 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 22 |
| Conread position: | 6-318 |
| Cow position: | chr10:19895436-19895125 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 27 |
| Conread position: | 6-318 |
| Cow position: | chr10:37014676-37014364 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 6-319 |
| Cow position: | chr10:15868294-15867960 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 193 |
| Conread position: | 6-319 |
| Cow position: | chr10:17073322-17073628 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-319 |
| Cow position: | chr10:50332637-50332317 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 24, 138 |
| Conread position: | 6-319 |
| Cow position: | chr10:69934738-69935053 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 123, 27 |
| Conread position: | 6-322 |
| Cow position: | chr10:15318927-15318607 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-341 |
| Cow position: | chr10:25149936-25149590 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 7-372 |
| Cow position: | chr10:15293307-15292937 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 8-227 |
| Cow position: | chr10:4109629-4109409 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 91 |
| Conread position: | 12-289 |
| Cow position: | chr10:32029796-32030070 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 21, 85 |
| Conread position: | 30-301 |
| Cow position: | chr10:60388748-60389017 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 39-299 |
| Cow position: | chr10:43508998-43508739 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 39-319 |
| Cow position: | chr10:20372117-20372407 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 56 |
| Conread position: | 41-319 |
| Cow position: | chr10:37444212-37444492 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 42-319 |
| Cow position: | chr10:60032565-60032851 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 25, 114 |
| Conread position: | 43-319 |
| Cow position: | chr10:24548262-24547983 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 24, 99 |
| Conread position: | 43-319 |
| Cow position: | chr10:52046867-52046590 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 44-308 |
| Cow position: | chr10:42312903-42312643 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 184, 51 |
| Conread position: | 47-319 |
| Cow position: | chr10:37528607-37528881 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 57-319 |
| Cow position: | chr10:20505533-20505266 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 58-314 |
| Cow position: | chr10:48388284-48388542 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 93, 43 |
| Conread position: | 58-322 |
| Cow position: | chr10:20735688-20735428 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 175, 37 |
| Conread position: | 59-300 |
| Cow position: | chr10:50200697-50200456 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 81, 24 |
| Conread position: | 59-302 |
| Cow position: | chr10:31266347-31266587 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 61-319 |
| Cow position: | chr10:14975811-14976068 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 62-330 |
| Cow position: | chr10:6986430-6986165 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 78 |
| Conread position: | 62-331 |
| Cow position: | chr10:1976331-1976609 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 89, 75 |
| Conread position: | 65-303 |
| Cow position: | chr10:36896382-36896145 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 93, 75 |
| Conread position: | 81-347 |
| Cow position: | chr10:22472279-22472013 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 59 |
| Conread position: | 89-294 |
| Cow position: | chr10:37709078-37709289 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 49 |
| Conread position: | 89-319 |
| Cow position: | chr10:9798240-9798469 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 90-319 |
| Cow position: | chr10:28038979-28039207 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 82 |
| Conread position: | 91-319 |
| Cow position: | chr10:33867435-33867652 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 91-322 |
| Cow position: | chr10:30455894-30456134 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 60, 42 |
| Conread position: | 93-280 |
| Cow position: | chr10:25882373-25882189 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 94-318 |
| Cow position: | chr10:47543034-47542816 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 99-318 |
| Cow position: | chr10:48377693-48377921 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 53, 38 |
| Conread position: | 102-306 |
| Cow position: | chr10:9445069-9445276 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 50, 37 |
| Conread position: | 102-319 |
| Cow position: | chr10:61305218-61305006 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 35 |
Show alignments to all cow chromosomes.