Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-272 |
| Cow position: | chr14:39037195-39037480 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 32 |
| Conread position: | 1-319 |
| Cow position: | chr14:48412913-48412582 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 1-322 |
| Cow position: | chr14:9019995-9020324 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 4-213 |
| Cow position: | chr14:4877254-4877046 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 4-230 |
| Cow position: | chr14:25002009-25002238 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 4-232 |
| Cow position: | chr14:33830276-33830504 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 86 |
| Conread position: | 4-263 |
| Cow position: | chr14:20110748-20110479 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 31, 126 |
| Conread position: | 4-302 |
| Cow position: | chr14:44848395-44848106 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 4-308 |
| Cow position: | chr14:47672907-47672599 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 4-309 |
| Cow position: | chr14:42784938-42785224 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 4-313 |
| Cow position: | chr14:37883942-37883630 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 137 |
| Conread position: | 4-318 |
| Cow position: | chr14:1868409-1868114 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 28, 89 |
| Conread position: | 4-319 |
| Cow position: | chr14:5630136-5630458 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 4-319 |
| Cow position: | chr14:16834296-16834625 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 228 |
| Conread position: | 4-319 |
| Cow position: | chr14:19594163-19593845 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 144 |
| Conread position: | 4-319 |
| Cow position: | chr14:19863459-19863146 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-319 |
| Cow position: | chr14:25779076-25779389 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 4-319 |
| Cow position: | chr14:35018779-35018461 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 5-319 |
| Cow position: | chr14:25385911-25385597 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 78 |
| Conread position: | 6-259 |
| Cow position: | chr14:14949237-14948973 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 110 |
| Conread position: | 6-293 |
| Cow position: | chr14:8786571-8786280 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 6-301 |
| Cow position: | chr14:36289822-36289539 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 6-303 |
| Cow position: | chr14:19129482-19129790 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 6-315 |
| Cow position: | chr14:20010335-20010020 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 6-319 |
| Cow position: | chr14:18485277-18484946 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 24, 134 |
| Conread position: | 6-319 |
| Cow position: | chr14:20600363-20600676 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 6-319 |
| Cow position: | chr14:38144131-38143819 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 27, 90 |
| Conread position: | 8-319 |
| Cow position: | chr14:20016729-20016412 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 24, 109 |
| Conread position: | 8-322 |
| Cow position: | chr14:3564262-3564571 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 21-317 |
| Cow position: | chr14:20712699-20712389 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 11, 114 |
| Conread position: | 25-319 |
| Cow position: | chr14:7558445-7558137 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 8, 261 |
| Conread position: | 29-317 |
| Cow position: | chr14:41756265-41756551 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 72, 32 |
| Conread position: | 30-308 |
| Cow position: | chr14:35498503-35498217 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 36, 176 |
| Conread position: | 43-266 |
| Cow position: | chr14:33643765-33643547 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 48-331 |
| Cow position: | chr14:41127917-41128202 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 51-319 |
| Cow position: | chr14:14280437-14280712 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 54-318 |
| Cow position: | chr14:10912935-10912679 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 120, 6 |
| Conread position: | 56-319 |
| Cow position: | chr14:11981667-11981948 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 233 |
| Conread position: | 57-319 |
| Cow position: | chr14:21284653-21284924 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 58-255 |
| Cow position: | chr14:37435271-37435063 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 28, 78 |
| Conread position: | 71-319 |
| Cow position: | chr14:45605133-45605384 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 79-319 |
| Cow position: | chr14:39821213-39821461 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 201 |
| Conread position: | 90-319 |
| Cow position: | chr14:4109411-4109178 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 35 |
| Conread position: | 100-335 |
| Cow position: | chr14:12614022-12613791 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 102-302 |
| Cow position: | chr14:24786015-24786211 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 102-303 |
| Cow position: | chr14:34355620-34355423 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 102-304 |
| Cow position: | chr14:6419230-6419032 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 103-318 |
| Cow position: | chr14:19624160-19624384 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 46, 37 |
Show alignments to all cow chromosomes.