Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-227 |
| Cow position: | chr19:7404314-7404546 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 142 |
| Conread position: | 1-311 |
| Cow position: | chr19:41946245-41945935 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 3-319 |
| Cow position: | chr19:39622732-39623048 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 151 |
| Conread position: | 3-319 |
| Cow position: | chr19:42205984-42205675 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 4-261 |
| Cow position: | chr19:25526341-25526079 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-296 |
| Cow position: | chr19:6531942-6531651 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 4-317 |
| Cow position: | chr19:40051336-40051646 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 4-319 |
| Cow position: | chr19:10081132-10080806 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 154 |
| Conread position: | 4-319 |
| Cow position: | chr19:10213729-10213408 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 4-319 |
| Cow position: | chr19:12601862-12601549 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 38 |
| Conread position: | 4-319 |
| Cow position: | chr19:14593113-14592788 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 228 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-319 |
| Cow position: | chr19:15862993-15863301 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 4-319 |
| Cow position: | chr19:16693974-16694310 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 28, 146 |
| Conread position: | 4-319 |
| Cow position: | chr19:18786265-18786588 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-331 |
| Cow position: | chr19:43418463-43418145 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 5-319 |
| Cow position: | chr19:53657948-53657638 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 6-215 |
| Cow position: | chr19:21817018-21816806 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 6-273 |
| Cow position: | chr19:43292109-43291829 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 6-283 |
| Cow position: | chr19:33055861-33056135 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 35 |
| Conread position: | 6-316 |
| Cow position: | chr19:56063374-56063689 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 6-318 |
| Cow position: | chr19:41024279-41023967 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 29, 91 |
| Conread position: | 6-319 |
| Cow position: | chr19:8496242-8496564 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 24, 84 |
| Conread position: | 6-319 |
| Cow position: | chr19:31595356-31595036 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 100 |
| Conread position: | 6-319 |
| Cow position: | chr19:31824958-31825278 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 6-319 |
| Cow position: | chr19:51400959-51401271 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 232 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 8-272 |
| Cow position: | chr19:34166420-34166146 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 37 |
| Conread position: | 8-319 |
| Cow position: | chr19:33469074-33468761 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 24, 113 |
| Conread position: | 8-319 |
| Cow position: | chr19:40450071-40449769 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 10-317 |
| Cow position: | chr19:15438153-15437848 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 136 |
| Conread position: | 10-319 |
| Cow position: | chr19:729695-729993 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 38-318 |
| Cow position: | chr19:14928635-14928932 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 226 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 39-319 |
| Cow position: | chr19:46918870-46918578 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 48-303 |
| Cow position: | chr19:10172014-10171754 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 48-312 |
| Cow position: | chr19:13267177-13267442 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 48-319 |
| Cow position: | chr19:21092780-21092517 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 18, 90 |
| Conread position: | 52-319 |
| Cow position: | chr19:6417601-6417337 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 53-319 |
| Cow position: | chr19:10786364-10786622 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 106, 35 |
| Conread position: | 53-347 |
| Cow position: | chr19:33932142-33932427 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 58-319 |
| Cow position: | chr19:419890-419614 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 77-319 |
| Cow position: | chr19:29070739-29070970 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 84-319 |
| Cow position: | chr19:53953685-53953906 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 65 |
| Conread position: | 89-312 |
| Cow position: | chr19:37562035-37562248 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 92-303 |
| Cow position: | chr19:48409478-48409268 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 94-297 |
| Cow position: | chr19:25851519-25851729 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 94-308 |
| Cow position: | chr19:25864955-25865176 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 94-311 |
| Cow position: | chr19:25851863-25852087 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 102-340 |
| Cow position: | chr19:42647103-42647346 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 26 |
Show alignments to all cow chromosomes.