Cow genome map

Conread name: rpgl11_m7.y1

Conread position: 1-303
Cow position: chr2:15250255-15249948 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 142

Conread position: 2-312
Cow position: chr2:24393629-24393933 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 33, 53

Conread position: 4-302
Cow position: chr2:29269141-29268827 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 26, 148

Conread position: 4-302
Cow position: chr2:80963581-80963879 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 29

Conread position: 4-304
Cow position: chr2:192397-192697 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 28, 95

Conread position: 4-307
Cow position: chr2:17114661-17114975 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 230
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 130

Conread position: 4-308
Cow position: chr2:66480117-66480418 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 28, 93

Conread position: 4-317
Cow position: chr2:44550780-44551083 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 136, 29

Conread position: 4-319
Cow position: chr2:21668-21990 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 236
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 28, 16

Conread position: 4-319
Cow position: chr2:41954955-41954628 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 36, 153

Conread position: 4-319
Cow position: chr2:45439503-45439204 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 39

Conread position: 4-319
Cow position: chr2:53650093-53649775 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 28, 139

Conread position: 4-331
Cow position: chr2:23270864-23271194 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 28, 65

Conread position: 4-349
Cow position: chr2:19494283-19493932 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 29, 154

Conread position: 5-264
Cow position: chr2:3308959-3309227 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 27, 41

Conread position: 5-319
Cow position: chr2:21416365-21416062 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 81, 28

Conread position: 6-224
Cow position: chr2:41622548-41622327 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 54

Conread position: 6-299
Cow position: chr2:1304016-1303718 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 100

Conread position: 6-301
Cow position: chr2:46909369-46909671 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 25, 135

Conread position: 6-317
Cow position: chr2:53532745-53533056 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 26, 135

Conread position: 6-319
Cow position: chr2:26438658-26438976 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 27, 93

Conread position: 6-319
Cow position: chr2:49428448-49428135 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 147

Conread position: 6-322
Cow position: chr2:45784806-45784482 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 188

Conread position: 8-302
Cow position: chr2:36017349-36017648 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 40

Conread position: 8-318
Cow position: chr2:56350852-56351167 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 24, 133

Conread position: 12-259
Cow position: chr2:26851224-26850969 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 20, 14

Conread position: 12-281
Cow position: chr2:19294655-19294388 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 20, 70

Conread position: 12-308
Cow position: chr2:28710938-28711227 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 123

Conread position: 12-319
Cow position: chr2:51594826-51594514 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 94

Conread position: 21-303
Cow position: chr2:60922921-60923209 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 112

Conread position: 21-319
Cow position: chr2:45880724-45881018 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 167

Conread position: 22-319
Cow position: chr2:69238330-69238022 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 115

Conread position: 39-277
Cow position: chr2:67313657-67313889 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 22, 63

Conread position: 39-319
Cow position: chr2:13582616-13582333 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 22, 100

Conread position: 47-319
Cow position: chr2:13467720-13467448 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 212
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 52, 11

Conread position: 53-318
Cow position: chr2:45311101-45311377 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 91

Conread position: 61-331
Cow position: chr2:62685649-62685372 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 95

Conread position: 62-302
Cow position: chr2:51824932-51824693 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 62-306
Cow position: chr2:38272157-38272392 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 75, 39

Conread position: 63-303
Cow position: chr2:78116338-78116578 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 88, 74

Conread position: 70-339
Cow position: chr2:42394422-42394161 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 87

Conread position: 72-311
Cow position: chr2:50777768-50777532 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 102, 68

Conread position: 72-313
Cow position: chr2:14555750-14555996 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 68

Conread position: 72-313
Cow position: chr2:25964489-25964730 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 32, 23

Conread position: 72-330
Cow position: chr2:81927851-81927594 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 198
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 21

Conread position: 77-263
Cow position: chr2:37424104-37424304 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 78-319
Cow position: chr2:45259087-45259327 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 8, 77

Conread position: 90-311
Cow position: chr2:69250689-69250919 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 44, 69

Conread position: 91-290
Cow position: chr2:41525744-41525944 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 40

Conread position: 93-319
Cow position: chr2:21171360-21171147 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 141, 44

Conread position: 94-319
Cow position: chr2:27076690-27076465 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 122, 46

Conread position: 95-292
Cow position: chr2:60462844-60463040 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 44

Conread position: 95-292
Cow position: chr2:60468223-60468419 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 56, 44

Conread position: 102-300
Cow position: chr2:333124-333308 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 72, 35

Conread position: 103-319
Cow position: chr2:24271201-24270976 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 37, 50

Conread position: 108-316
Cow position: chr2:14396279-14396487 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 31

Show alignments to all cow chromosomes.