Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-313 |
| Cow position: | chr22:34712796-34712465 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 164 |
| Conread position: | 1-317 |
| Cow position: | chr22:23857116-23856795 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 1-319 |
| Cow position: | chr22:25205903-25206224 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 2-355 |
| Cow position: | chr22:10421099-10420733 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 154 |
| Conread position: | 4-258 |
| Cow position: | chr22:12315875-12315615 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 4-263 |
| Cow position: | chr22:27047348-27047601 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 211, 29 |
| Conread position: | 4-268 |
| Cow position: | chr22:17125647-17125376 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 4-290 |
| Cow position: | chr22:43119664-43119955 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 105 |
| Conread position: | 4-303 |
| Cow position: | chr22:7153946-7153651 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 4-313 |
| Cow position: | chr22:590404-590094 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 139 |
| Conread position: | 4-313 |
| Cow position: | chr22:31592791-31593110 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 4-319 |
| Cow position: | chr22:1975674-1975357 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 4-319 |
| Cow position: | chr22:5337533-5337853 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 4-319 |
| Cow position: | chr22:6721016-6721320 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 29 |
| Conread position: | 4-319 |
| Cow position: | chr22:7838655-7838350 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 4-319 |
| Cow position: | chr22:16251508-16251818 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 4-319 |
| Cow position: | chr22:17852571-17852877 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 4-319 |
| Cow position: | chr22:25742884-25743208 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 28, 152 |
| Conread position: | 4-319 |
| Cow position: | chr22:26184096-26184415 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 237 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 4-319 |
| Cow position: | chr22:30049501-30049828 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 28, 158 |
| Conread position: | 4-322 |
| Cow position: | chr22:3965251-3964927 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 27, 95 |
| Conread position: | 4-331 |
| Cow position: | chr22:845968-845635 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 4-331 |
| Cow position: | chr22:40048619-40048295 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 58, 25 |
| Conread position: | 5-287 |
| Cow position: | chr22:10632978-10632692 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 27, 56 |
| Conread position: | 5-319 |
| Cow position: | chr22:877579-877268 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 27, 103 |
| Conread position: | 5-319 |
| Cow position: | chr22:27581504-27581194 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 30, 58 |
| Conread position: | 5-335 |
| Cow position: | chr22:16621240-16620903 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 6-230 |
| Cow position: | chr22:12389162-12388925 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 6-312 |
| Cow position: | chr22:7852027-7851711 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 6-318 |
| Cow position: | chr22:14143051-14143360 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 6-319 |
| Cow position: | chr22:4583625-4583315 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 6-319 |
| Cow position: | chr22:16044353-16044684 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 136 |
| Conread position: | 6-319 |
| Cow position: | chr22:17294873-17295183 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 6-319 |
| Cow position: | chr22:22860849-22861166 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 6-319 |
| Cow position: | chr22:23804913-23805239 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 137 |
| Conread position: | 6-319 |
| Cow position: | chr22:34398393-34398710 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-320 |
| Cow position: | chr22:8733274-8733578 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 6-322 |
| Cow position: | chr22:4990104-4990429 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 8-319 |
| Cow position: | chr22:19047755-19048058 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 136 |
| Conread position: | 8-353 |
| Cow position: | chr22:41829180-41829518 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 241 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 11-317 |
| Cow position: | chr22:44180651-44180340 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 12-319 |
| Cow position: | chr22:30515314-30515000 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 30-301 |
| Cow position: | chr22:25629727-25630008 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 31-302 |
| Cow position: | chr22:13841175-13840899 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 39-306 |
| Cow position: | chr22:5467333-5467611 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 43-315 |
| Cow position: | chr22:13688074-13688363 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 43-319 |
| Cow position: | chr22:23865494-23865207 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 20, 54 |
| Conread position: | 48-297 |
| Cow position: | chr22:36539646-36539906 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 11 |
| Conread position: | 58-291 |
| Cow position: | chr22:13769478-13769252 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 154, 31 |
| Conread position: | 58-306 |
| Cow position: | chr22:853028-852787 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 58-319 |
| Cow position: | chr22:5042321-5042064 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 94, 24 |
| Conread position: | 59-258 |
| Cow position: | chr22:10677984-10678181 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 169, 78 |
| Conread position: | 59-319 |
| Cow position: | chr22:9521149-9520895 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 29, 68 |
| Conread position: | 59-322 |
| Cow position: | chr22:6360480-6360746 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 62-303 |
| Cow position: | chr22:23403643-23403880 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 92, 77 |
| Conread position: | 62-304 |
| Cow position: | chr22:22146236-22145986 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 62-319 |
| Cow position: | chr22:23833295-23833041 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 63-303 |
| Cow position: | chr22:32952479-32952239 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 63-314 |
| Cow position: | chr22:42684911-42684649 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 32 |
| Conread position: | 63-319 |
| Cow position: | chr22:41044907-41045169 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 89, 74 |
| Conread position: | 70-299 |
| Cow position: | chr22:26316465-26316238 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 71-319 |
| Cow position: | chr22:42612453-42612203 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 78-313 |
| Cow position: | chr22:3252966-3253185 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 78-331 |
| Cow position: | chr22:19787690-19787947 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 79-245 |
| Cow position: | chr22:32895206-32895041 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 93-319 |
| Cow position: | chr22:35533375-35533610 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 5, 174 |
| Conread position: | 94-307 |
| Cow position: | chr22:2141782-2141571 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 97-319 |
| Cow position: | chr22:26659024-26658800 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 98-275 |
| Cow position: | chr22:3945145-3944960 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 39 |
| Conread position: | 98-301 |
| Cow position: | chr22:20687272-20687056 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 102-319 |
| Cow position: | chr22:14601469-14601259 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 106-307 |
| Cow position: | chr22:26749084-26749293 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 42, 154 |
Show alignments to all cow chromosomes.