Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-306 |
| Cow position: | chr23:1647692-1647391 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 3-319 |
| Cow position: | chr23:18322355-18322669 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 56, 33 |
| Conread position: | 3-319 |
| Cow position: | chr23:29626488-29626164 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 29, 140 |
| Conread position: | 4-261 |
| Cow position: | chr23:19371004-19371265 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 4-317 |
| Cow position: | chr23:10014600-10014297 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 59 |
| Conread position: | 4-319 |
| Cow position: | chr23:1923766-1924083 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 4-319 |
| Cow position: | chr23:4726864-4726550 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 16, 53 |
| Conread position: | 4-319 |
| Cow position: | chr23:4968453-4968769 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 5-320 |
| Cow position: | chr23:4528807-4529143 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 27, 287 |
| Conread position: | 6-214 |
| Cow position: | chr23:10829513-10829724 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 6-275 |
| Cow position: | chr23:40648663-40648937 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 6-306 |
| Cow position: | chr23:27544896-27544595 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 6-314 |
| Cow position: | chr23:1885104-1885421 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-319 |
| Cow position: | chr23:187247-186921 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 6-319 |
| Cow position: | chr23:3247657-3247338 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 27, 65 |
| Conread position: | 6-319 |
| Cow position: | chr23:36309489-36309177 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 133 |
| Conread position: | 10-373 |
| Cow position: | chr23:38208791-38208413 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 11-299 |
| Cow position: | chr23:41472685-41472379 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 21, 277 |
| Conread position: | 12-188 |
| Cow position: | chr23:3244851-3245032 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 129 |
| Conread position: | 12-319 |
| Cow position: | chr23:11045547-11045234 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 49, 19 |
| Conread position: | 31-266 |
| Cow position: | chr23:1742399-1742158 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 26, 72 |
| Conread position: | 31-365 |
| Cow position: | chr23:15287096-15287429 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 66 |
| Conread position: | 33-319 |
| Cow position: | chr23:1803826-1803544 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 61 |
| Conread position: | 39-319 |
| Cow position: | chr23:1670936-1670667 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 65 |
| Conread position: | 58-276 |
| Cow position: | chr23:39028793-39028574 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 116, 32 |
| Conread position: | 58-316 |
| Cow position: | chr23:29242962-29242698 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 58-319 |
| Cow position: | chr23:18367713-18367446 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 37 |
| Conread position: | 62-300 |
| Cow position: | chr23:15710064-15710309 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 71-301 |
| Cow position: | chr23:3208619-3208851 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 71-319 |
| Cow position: | chr23:38854735-38854984 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 78-303 |
| Cow position: | chr23:5603292-5603505 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 138, 17 |
| Conread position: | 79-303 |
| Cow position: | chr23:11081069-11080847 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 58 |
| Conread position: | 79-303 |
| Cow position: | chr23:35254245-35254472 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 90-303 |
| Cow position: | chr23:25189327-25189105 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 69 |
| Conread position: | 92-319 |
| Cow position: | chr23:13511715-13511483 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 73, 45 |
| Conread position: | 95-308 |
| Cow position: | chr23:33601550-33601763 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 95-318 |
| Cow position: | chr23:4608404-4608631 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 101-319 |
| Cow position: | chr23:36199262-36199043 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 51, 38 |
Show alignments to all cow chromosomes.