Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-319 |
| Cow position: | chr24:36404095-36404423 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 31, 116 |
| Conread position: | 1-319 |
| Cow position: | chr24:43364407-43364087 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 4-256 |
| Cow position: | chr24:15373449-15373194 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 4-259 |
| Cow position: | chr24:33465577-33465819 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 4-263 |
| Cow position: | chr24:6102871-6102600 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 51, 29 |
| Conread position: | 4-268 |
| Cow position: | chr24:24457206-24457474 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 4-292 |
| Cow position: | chr24:24755491-24755200 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 142 |
| Conread position: | 4-306 |
| Cow position: | chr24:32124594-32124905 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 4-308 |
| Cow position: | chr24:32204751-32205059 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 4-311 |
| Cow position: | chr24:17955401-17955716 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 94 |
| Conread position: | 4-318 |
| Cow position: | chr24:201593-201908 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 28, 125 |
| Conread position: | 4-318 |
| Cow position: | chr24:15861550-15861876 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 139 |
| Conread position: | 4-319 |
| Cow position: | chr24:15508500-15508810 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 4-319 |
| Cow position: | chr24:18970464-18970768 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 233 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 4-319 |
| Cow position: | chr24:33944445-33944131 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 4-320 |
| Cow position: | chr24:32054705-32054394 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 4-326 |
| Cow position: | chr24:19769533-19769216 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 102 |
| Conread position: | 4-350 |
| Cow position: | chr24:43432834-43432499 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 5-262 |
| Cow position: | chr24:16510020-16509751 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 6-267 |
| Cow position: | chr24:28327039-28327309 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 6-317 |
| Cow position: | chr24:28721929-28721614 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 6-340 |
| Cow position: | chr24:44987333-44987672 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 255 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 132 |
| Conread position: | 7-319 |
| Cow position: | chr24:30229514-30229190 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 7-319 |
| Cow position: | chr24:44040963-44041286 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 155 |
| Conread position: | 12-319 |
| Cow position: | chr24:27290907-27290601 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 131 |
| Conread position: | 15-319 |
| Cow position: | chr24:18484961-18485276 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 15-331 |
| Cow position: | chr24:27608065-27608387 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 15, 130 |
| Conread position: | 31-319 |
| Cow position: | chr24:7917346-7917643 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 31-319 |
| Cow position: | chr24:30483933-30484219 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 34-339 |
| Cow position: | chr24:36554822-36555125 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 16 |
| Conread position: | 39-319 |
| Cow position: | chr24:27052487-27052768 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 39-319 |
| Cow position: | chr24:28553547-28553820 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 45-301 |
| Cow position: | chr24:42007741-42007487 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 58-299 |
| Cow position: | chr24:27149385-27149141 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 58-319 |
| Cow position: | chr24:35074079-35073816 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 77-314 |
| Cow position: | chr24:5152204-5151964 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 20, 62 |
| Conread position: | 90-319 |
| Cow position: | chr24:18405364-18405580 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 94-319 |
| Cow position: | chr24:27719804-27720028 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 95-319 |
| Cow position: | chr24:40850114-40849888 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 95-335 |
| Cow position: | chr24:40055778-40056015 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 102-314 |
| Cow position: | chr24:32158331-32158541 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 111, 37 |
| Conread position: | 102-351 |
| Cow position: | chr24:29389185-29388944 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 49, 29 |
Show alignments to all cow chromosomes.