Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-312 |
| Cow position: | chr25:11585589-11585271 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 1-319 |
| Cow position: | chr25:16064961-16064643 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 136 |
| Conread position: | 1-331 |
| Cow position: | chr25:33978149-33978468 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 3-306 |
| Cow position: | chr25:15377393-15377092 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 4-230 |
| Cow position: | chr25:18905951-18905720 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 4-240 |
| Cow position: | chr25:21893404-21893162 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 4-268 |
| Cow position: | chr25:16714203-16714479 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 4-319 |
| Cow position: | chr25:7216890-7216574 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 28, 36 |
| Conread position: | 4-319 |
| Cow position: | chr25:14196929-14196601 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 4-319 |
| Cow position: | chr25:28187879-28188202 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 4-332 |
| Cow position: | chr25:6682996-6683325 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 27, 140 |
| Conread position: | 4-337 |
| Cow position: | chr25:36081941-36081600 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 5-229 |
| Cow position: | chr25:19317330-19317098 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 5-313 |
| Cow position: | chr25:5756749-5756449 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 212 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 5-319 |
| Cow position: | chr25:22531346-22531033 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 27, 132 |
| Conread position: | 5-319 |
| Cow position: | chr25:36036714-36037034 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 6-302 |
| Cow position: | chr25:10504277-10504572 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 61, 27 |
| Conread position: | 6-319 |
| Cow position: | chr25:6463967-6464283 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 6-319 |
| Cow position: | chr25:26654971-26654653 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 6-331 |
| Cow position: | chr25:37594470-37594147 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 26, 131 |
| Conread position: | 7-319 |
| Cow position: | chr25:21951193-21950872 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 18-319 |
| Cow position: | chr25:22203637-22203944 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 31-331 |
| Cow position: | chr25:9957001-9957299 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 33-318 |
| Cow position: | chr25:14791792-14791499 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 107 |
| Conread position: | 33-319 |
| Cow position: | chr25:36535398-36535686 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 103 |
| Conread position: | 40-302 |
| Cow position: | chr25:36779529-36779258 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 23, 101 |
| Conread position: | 48-341 |
| Cow position: | chr25:25827489-25827186 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 52-318 |
| Cow position: | chr25:16001512-16001774 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 7 |
| Conread position: | 54-319 |
| Cow position: | chr25:35345043-35344784 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 58-320 |
| Cow position: | chr25:12824009-12824269 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 59-226 |
| Cow position: | chr25:32587871-32588036 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 36 |
| Conread position: | 59-299 |
| Cow position: | chr25:11054911-11054686 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 59-313 |
| Cow position: | chr25:8918269-8918526 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 43 |
| Conread position: | 72-292 |
| Cow position: | chr25:35333153-35332938 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 90-259 |
| Cow position: | chr25:21042358-21042191 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 14 |
| Conread position: | 94-319 |
| Cow position: | chr25:36026983-36026753 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 43, 62 |
| Conread position: | 95-318 |
| Cow position: | chr25:10365779-10366005 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 95-319 |
| Cow position: | chr25:12204444-12204216 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 96-319 |
| Cow position: | chr25:6424615-6424839 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 120, 37 |
| Conread position: | 97-319 |
| Cow position: | chr25:13642340-13642570 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 55, 40 |
| Conread position: | 102-299 |
| Cow position: | chr25:35625217-35625408 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 111, 40 |
| Conread position: | 102-318 |
| Cow position: | chr25:4002767-4002543 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 32 |
| Conread position: | 106-318 |
| Cow position: | chr25:16400300-16400503 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.