Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 2-319 |
| Cow position: | chr27:23128346-23128663 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 4-312 |
| Cow position: | chr27:22603074-22603364 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 170, 29 |
| Conread position: | 4-313 |
| Cow position: | chr27:26999534-26999222 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 31, 115 |
| Conread position: | 4-319 |
| Cow position: | chr27:12596665-12596964 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 66, 29 |
| Conread position: | 4-319 |
| Cow position: | chr27:17397566-17397241 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 4-331 |
| Cow position: | chr27:19660820-19661162 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 29, 160 |
| Conread position: | 4-332 |
| Cow position: | chr27:18593161-18593489 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 5-318 |
| Cow position: | chr27:24999851-24999527 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 6-187 |
| Cow position: | chr27:15215120-15215307 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 148 |
| Conread position: | 6-215 |
| Cow position: | chr27:715391-715604 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 26, 120 |
| Conread position: | 6-268 |
| Cow position: | chr27:27270652-27270378 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 26, 77 |
| Conread position: | 6-302 |
| Cow position: | chr27:11296160-11296449 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 124 |
| Conread position: | 6-308 |
| Cow position: | chr27:13875624-13875929 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 6-317 |
| Cow position: | chr27:29831807-29831482 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 6-319 |
| Cow position: | chr27:536353-536665 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 27, 105 |
| Conread position: | 6-319 |
| Cow position: | chr27:2592432-2592749 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 6-319 |
| Cow position: | chr27:6550354-6550659 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 6-319 |
| Cow position: | chr27:25379878-25380199 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 138 |
| Conread position: | 6-319 |
| Cow position: | chr27:27064549-27064232 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 7-252 |
| Cow position: | chr27:8263446-8263197 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 7-317 |
| Cow position: | chr27:18558252-18558570 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 7-319 |
| Cow position: | chr27:28518187-28518493 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 68 |
| Conread position: | 8-352 |
| Cow position: | chr27:20037224-20036889 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 9-275 |
| Cow position: | chr27:9169748-9169477 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 12-319 |
| Cow position: | chr27:30582631-30582946 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 42-230 |
| Cow position: | chr27:7538149-7537957 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 65 |
| Conread position: | 43-319 |
| Cow position: | chr27:27040531-27040817 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 58-300 |
| Cow position: | chr27:30670686-30670927 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 28 |
| Conread position: | 58-317 |
| Cow position: | chr27:1183938-1183670 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 86 |
| Conread position: | 59-319 |
| Cow position: | chr27:24227846-24227585 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 115, 5 |
| Conread position: | 69-319 |
| Cow position: | chr27:23929932-23930172 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 91-319 |
| Cow position: | chr27:28190236-28190009 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 94-300 |
| Cow position: | chr27:6058481-6058692 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 61 |
| Conread position: | 97-274 |
| Cow position: | chr27:18434487-18434304 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 42 |
| Conread position: | 97-317 |
| Cow position: | chr27:18215035-18215262 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 97-319 |
| Cow position: | chr27:15925324-15925543 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 56 |
Show alignments to all cow chromosomes.