Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-306 |
| Cow position: | chr28:21380959-21380644 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 1-313 |
| Cow position: | chr28:4307819-4308138 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 8, 146 |
| Conread position: | 1-335 |
| Cow position: | chr28:7697906-7698248 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 69, 32 |
| Conread position: | 3-330 |
| Cow position: | chr28:13865916-13865587 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 28 |
| Conread position: | 4-150 |
| Cow position: | chr28:3160880-3161025 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 28, 79 |
| Conread position: | 4-265 |
| Cow position: | chr28:4881167-4881440 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-296 |
| Cow position: | chr28:7865402-7865100 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 159 |
| Conread position: | 4-313 |
| Cow position: | chr28:24966459-24966148 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 4-319 |
| Cow position: | chr28:3023840-3024158 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 60 |
| Conread position: | 4-319 |
| Cow position: | chr28:15263645-15263971 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 4-319 |
| Cow position: | chr28:20313350-20313029 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-319 |
| Cow position: | chr28:23410250-23410570 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 32, 104 |
| Conread position: | 4-320 |
| Cow position: | chr28:23007657-23007975 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 28, 140 |
| Conread position: | 4-331 |
| Cow position: | chr28:4841317-4841654 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 5-299 |
| Cow position: | chr28:25727444-25727151 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 6-262 |
| Cow position: | chr28:21363811-21363559 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 6-304 |
| Cow position: | chr28:9100004-9099703 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 6-304 |
| Cow position: | chr28:10606563-10606851 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 6-317 |
| Cow position: | chr28:16085396-16085080 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-331 |
| Cow position: | chr28:8022032-8022368 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 8-262 |
| Cow position: | chr28:26982669-26982938 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 82 |
| Conread position: | 8-319 |
| Cow position: | chr28:5771435-5771120 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 12-319 |
| Cow position: | chr28:28765838-28766156 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 21-337 |
| Cow position: | chr28:25700809-25701125 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 31-319 |
| Cow position: | chr28:616430-616157 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 30, 106 |
| Conread position: | 37-249 |
| Cow position: | chr28:28903625-28903845 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 104 |
| Conread position: | 39-302 |
| Cow position: | chr28:16204298-16204563 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 43-319 |
| Cow position: | chr28:26269361-26269083 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 48-302 |
| Cow position: | chr28:5552913-5553160 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 58-319 |
| Cow position: | chr28:9390348-9390611 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 44 |
| Conread position: | 58-326 |
| Cow position: | chr28:4022403-4022131 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 93, 79 |
| Conread position: | 59-319 |
| Cow position: | chr28:22170695-22170964 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 45, 76 |
| Conread position: | 62-258 |
| Cow position: | chr28:118039-118243 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 62-319 |
| Cow position: | chr28:4880253-4880510 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 63-303 |
| Cow position: | chr28:19394629-19394400 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 74 |
| Conread position: | 64-317 |
| Cow position: | chr28:23840213-23839965 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 69-256 |
| Cow position: | chr28:19024149-19023947 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 31, 68 |
| Conread position: | 80-319 |
| Cow position: | chr28:23621541-23621302 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 102-319 |
| Cow position: | chr28:16214930-16215137 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 102-319 |
| Cow position: | chr28:24996615-24996834 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 106-320 |
| Cow position: | chr28:11451494-11451714 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 45, 18 |
Show alignments to all cow chromosomes.