Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-317 |
| Cow position: | chr7:60547550-60547872 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 100 |
| Conread position: | 1-357 |
| Cow position: | chr7:38060311-38060686 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 8, 142 |
| Conread position: | 2-298 |
| Cow position: | chr7:67873307-67872993 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 4-236 |
| Cow position: | chr7:5853459-5853234 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 51 |
| Conread position: | 4-244 |
| Cow position: | chr7:34412168-34412411 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 4-252 |
| Cow position: | chr7:2579127-2579389 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 4-256 |
| Cow position: | chr7:14536171-14536432 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 52, 29 |
| Conread position: | 4-261 |
| Cow position: | chr7:23251456-23251706 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 4-265 |
| Cow position: | chr7:2897272-2897003 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 26 |
| Conread position: | 4-300 |
| Cow position: | chr7:3336440-3336742 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 93 |
| Conread position: | 4-300 |
| Cow position: | chr7:63946476-63946765 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 26, 95 |
| Conread position: | 4-302 |
| Cow position: | chr7:255709-256001 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 149, 29 |
| Conread position: | 4-303 |
| Cow position: | chr7:32079561-32079265 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 4-308 |
| Cow position: | chr7:27283784-27283480 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 136, 29 |
| Conread position: | 4-316 |
| Cow position: | chr7:44986763-44986451 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 4-317 |
| Cow position: | chr7:63749366-63749687 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 91 |
| Conread position: | 4-319 |
| Cow position: | chr7:11066589-11066266 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 4-319 |
| Cow position: | chr7:14450435-14450145 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 4-319 |
| Cow position: | chr7:26911330-26911647 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 4-319 |
| Cow position: | chr7:37142263-37142574 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 4-319 |
| Cow position: | chr7:48406383-48406710 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 4-322 |
| Cow position: | chr7:24220778-24220459 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 4-331 |
| Cow position: | chr7:20519-20174 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 237 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 28, 185 |
| Conread position: | 5-258 |
| Cow position: | chr7:5212367-5212624 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 5-319 |
| Cow position: | chr7:2896869-2896551 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 5-319 |
| Cow position: | chr7:9146752-9146436 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 232 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 5-319 |
| Cow position: | chr7:33386031-33385724 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 6-230 |
| Cow position: | chr7:58923506-58923275 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 6-292 |
| Cow position: | chr7:51019886-51019604 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 6-302 |
| Cow position: | chr7:13963319-13963010 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 26, 156 |
| Conread position: | 6-317 |
| Cow position: | chr7:22623994-22624313 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 6-318 |
| Cow position: | chr7:25393407-25393081 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 240 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 126, 29 |
| Conread position: | 6-318 |
| Cow position: | chr7:40321596-40321280 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 27, 87 |
| Conread position: | 6-319 |
| Cow position: | chr7:11869732-11870039 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 6-319 |
| Cow position: | chr7:12408133-12408450 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 6-319 |
| Cow position: | chr7:19267262-19267579 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 6-319 |
| Cow position: | chr7:40008937-40008608 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 6-319 |
| Cow position: | chr7:44589750-44590056 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 6-319 |
| Cow position: | chr7:64268886-64269195 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 6-320 |
| Cow position: | chr7:47931688-47932006 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 6-326 |
| Cow position: | chr7:39093818-39094132 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 6-330 |
| Cow position: | chr7:16022403-16022081 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 92 |
| Conread position: | 6-331 |
| Cow position: | chr7:20176600-20176928 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 7-313 |
| Cow position: | chr7:4892966-4892664 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 7-319 |
| Cow position: | chr7:53053296-53053616 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 8-303 |
| Cow position: | chr7:14029415-14029142 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 8-319 |
| Cow position: | chr7:46823776-46823458 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 8-319 |
| Cow position: | chr7:64572950-64573270 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 25, 269 |
| Conread position: | 9-319 |
| Cow position: | chr7:25722560-25722874 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 6, 116 |
| Conread position: | 12-369 |
| Cow position: | chr7:19230413-19230764 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 23, 87 |
| Conread position: | 13-267 |
| Cow position: | chr7:40051658-40051919 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 19, 68 |
| Conread position: | 22-319 |
| Cow position: | chr7:39518385-39518091 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 31-301 |
| Cow position: | chr7:37697882-37697612 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 39, 112 |
| Conread position: | 39-299 |
| Cow position: | chr7:41327965-41328228 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 40-299 |
| Cow position: | chr7:51319871-51319606 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 43-288 |
| Cow position: | chr7:68909256-68909014 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 54 |
| Conread position: | 48-308 |
| Cow position: | chr7:44094870-44095142 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 48-358 |
| Cow position: | chr7:600400-600097 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 49-331 |
| Cow position: | chr7:40991768-40991484 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 50-319 |
| Cow position: | chr7:3729148-3728881 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 117, 87 |
| Conread position: | 55-319 |
| Cow position: | chr7:35652017-35652289 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 58-270 |
| Cow position: | chr7:44942507-44942295 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 37 |
| Conread position: | 58-280 |
| Cow position: | chr7:28428060-28427845 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 80 |
| Conread position: | 59-283 |
| Cow position: | chr7:32372912-32372685 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 59-319 |
| Cow position: | chr7:19095976-19096240 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 156, 40 |
| Conread position: | 63-320 |
| Cow position: | chr7:16220078-16220336 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 107, 70 |
| Conread position: | 69-317 |
| Cow position: | chr7:4418417-4418674 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 70-319 |
| Cow position: | chr7:34569229-34568990 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 72-322 |
| Cow position: | chr7:67816942-67816695 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 67 |
| Conread position: | 78-213 |
| Cow position: | chr7:58296855-58296989 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 80-319 |
| Cow position: | chr7:19399645-19399886 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 23, 61 |
| Conread position: | 89-313 |
| Cow position: | chr7:14712177-14712397 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 9, 50 |
| Conread position: | 94-318 |
| Cow position: | chr7:53034302-53034521 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 95-317 |
| Cow position: | chr7:42431846-42431616 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 64, 42 |
| Conread position: | 95-331 |
| Cow position: | chr7:59688555-59688322 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 96-319 |
| Cow position: | chr7:20415286-20415513 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 96-319 |
| Cow position: | chr7:21650119-21649891 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 97-318 |
| Cow position: | chr7:38696863-38696639 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 100-319 |
| Cow position: | chr7:45658375-45658594 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 39 |
| Conread position: | 102-319 |
| Cow position: | chr7:36830666-36830453 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 102-319 |
| Cow position: | chr7:64236271-64236499 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 106-303 |
| Cow position: | chr7:12201916-12202110 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 46, 31 |
Show alignments to all cow chromosomes.