Cow genome map
| Conread name: | rpgl11_m7.y1 |
| Conread position: | 1-319 |
| Cow position: | chr8:9130846-9131168 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 1-319 |
| Cow position: | chr8:12795906-12795574 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 99 |
| Conread position: | 1-319 |
| Cow position: | chr8:16972443-16972771 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 2-303 |
| Cow position: | chr8:20307058-20306758 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 4-230 |
| Cow position: | chr8:37347376-37347608 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 154 |
| Conread position: | 4-256 |
| Cow position: | chr8:5894023-5893763 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 4-260 |
| Cow position: | chr8:19011716-19011974 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 4-263 |
| Cow position: | chr8:61128618-61128893 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 4-269 |
| Cow position: | chr8:11278026-11278310 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 4-270 |
| Cow position: | chr8:39174163-39174444 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 142 |
| Conread position: | 4-312 |
| Cow position: | chr8:20684051-20683738 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 4-319 |
| Cow position: | chr8:4940240-4940550 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 29 |
| Conread position: | 4-319 |
| Cow position: | chr8:8986866-8987178 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 149 |
| Conread position: | 4-319 |
| Cow position: | chr8:20837199-20836886 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 29 |
| Conread position: | 4-319 |
| Cow position: | chr8:21077662-21077357 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 4-319 |
| Cow position: | chr8:36375437-36375753 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 4-319 |
| Cow position: | chr8:43167949-43168265 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 26, 155 |
| Conread position: | 4-319 |
| Cow position: | chr8:48512934-48513248 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 88 |
| Conread position: | 4-319 |
| Cow position: | chr8:58417761-58417450 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 133, 29 |
| Conread position: | 4-319 |
| Cow position: | chr8:58520373-58520061 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 28, 96 |
| Conread position: | 4-322 |
| Cow position: | chr8:32620904-32621241 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 28, 144 |
| Conread position: | 4-335 |
| Cow position: | chr8:24390117-24390457 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 4-373 |
| Cow position: | chr8:42794243-42794617 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 29, 85 |
| Conread position: | 6-265 |
| Cow position: | chr8:4500569-4500298 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-292 |
| Cow position: | chr8:51694737-51695014 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 26, 135 |
| Conread position: | 6-302 |
| Cow position: | chr8:37167820-37167527 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 57 |
| Conread position: | 6-303 |
| Cow position: | chr8:50310774-50311073 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 26, 106 |
| Conread position: | 6-306 |
| Cow position: | chr8:14947219-14947534 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 92 |
| Conread position: | 6-307 |
| Cow position: | chr8:21206957-21206653 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 6-317 |
| Cow position: | chr8:8668110-8668437 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 234 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 29, 143 |
| Conread position: | 6-317 |
| Cow position: | chr8:15394784-15395094 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 6-317 |
| Cow position: | chr8:47664829-47665146 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 6-319 |
| Cow position: | chr8:17199355-17199676 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 6-319 |
| Cow position: | chr8:20212424-20212748 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 268 |
| Conread position: | 6-319 |
| Cow position: | chr8:30244767-30245066 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 146, 26 |
| Conread position: | 6-319 |
| Cow position: | chr8:53429852-53429532 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 6-340 |
| Cow position: | chr8:36606355-36606032 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 8-329 |
| Cow position: | chr8:20157685-20158011 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 24, 136 |
| Conread position: | 9-331 |
| Cow position: | chr8:49687143-49687476 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 31-188 |
| Cow position: | chr8:55095931-55095775 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 31-319 |
| Cow position: | chr8:24471702-24471406 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 26, 108 |
| Conread position: | 31-319 |
| Cow position: | chr8:29765310-29765014 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 33-320 |
| Cow position: | chr8:53485747-53485464 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 37-319 |
| Cow position: | chr8:28412570-28412853 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 39-297 |
| Cow position: | chr8:45689857-45690120 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 39-319 |
| Cow position: | chr8:43190988-43191266 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 43-307 |
| Cow position: | chr8:53558568-53558832 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 43-313 |
| Cow position: | chr8:39475480-39475204 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 27, 92 |
| Conread position: | 49-317 |
| Cow position: | chr8:47135981-47136250 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 50-319 |
| Cow position: | chr8:44437793-44437526 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 51-312 |
| Cow position: | chr8:32295698-32295973 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 16, 84 |
| Conread position: | 58-230 |
| Cow position: | chr8:32332465-32332639 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 58-294 |
| Cow position: | chr8:37148143-37147903 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 58-301 |
| Cow position: | chr8:24952369-24952116 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 85 |
| Conread position: | 58-303 |
| Cow position: | chr8:36465227-36464980 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 116, 42 |
| Conread position: | 58-319 |
| Cow position: | chr8:4744876-4745140 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 58-319 |
| Cow position: | chr8:5484848-5485121 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 58-319 |
| Cow position: | chr8:6232875-6233139 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 59-331 |
| Cow position: | chr8:20384800-20384535 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 36 |
| Conread position: | 61-319 |
| Cow position: | chr8:21826731-21826989 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 63-317 |
| Cow position: | chr8:53964730-53964979 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 69-303 |
| Cow position: | chr8:20926628-20926862 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 77-303 |
| Cow position: | chr8:31253815-31253586 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 27 |
| Conread position: | 86-319 |
| Cow position: | chr8:52308733-52308967 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 88, 16 |
| Conread position: | 89-303 |
| Cow position: | chr8:39555973-39555751 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 49 |
| Conread position: | 90-319 |
| Cow position: | chr8:54195525-54195298 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 59 |
| Conread position: | 96-322 |
| Cow position: | chr8:3704604-3704378 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 8 |
| Conread position: | 97-313 |
| Cow position: | chr8:45687686-45687905 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 102-228 |
| Cow position: | chr8:5450632-5450757 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 72, 37 |
| Conread position: | 158-268 |
| Cow position: | chr8:54269087-54269199 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 26 |
| Conread position: | 169-318 |
| Cow position: | chr8:59061583-59061431 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 105 |
Show alignments to all cow chromosomes.