Cow genome map
| Conread name: | rpgl15_e18.y1 |
| Conread position: | 23-218 |
| Cow position: | chr1:80359043-80358840 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 28-178 |
| Cow position: | chr1:33551062-33551212 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 53 |
| Conread position: | 30-198 |
| Cow position: | chr1:18027623-18027455 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 32-183 |
| Cow position: | chr1:67286640-67286785 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 105, 25 |
| Conread position: | 32-210 |
| Cow position: | chr1:72080928-72081105 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 33-184 |
| Cow position: | chr1:62244498-62244347 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 33-198 |
| Cow position: | chr1:82918516-82918350 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 33-213 |
| Cow position: | chr1:62853696-62853511 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 33-218 |
| Cow position: | chr1:78290014-78290199 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 35-163 |
| Cow position: | chr1:40954054-40954181 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-175 |
| Cow position: | chr1:89740111-89739978 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-178 |
| Cow position: | chr1:85780629-85780486 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-184 |
| Cow position: | chr1:58335987-58336135 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 35-184 |
| Cow position: | chr1:60339457-60339606 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-191 |
| Cow position: | chr1:42290540-42290691 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 35-191 |
| Cow position: | chr1:52232963-52232807 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-191 |
| Cow position: | chr1:101857833-101857678 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:13645865-13646026 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 101, 42 |
| Conread position: | 35-198 |
| Cow position: | chr1:33712215-33712378 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 140 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-198 |
| Cow position: | chr1:38414952-38415112 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:40308215-40308372 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:59674602-59674764 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:72657139-72657301 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:87207275-87207114 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:88635524-88635685 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:89770533-89770370 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 49 |
| Conread position: | 35-198 |
| Cow position: | chr1:89899551-89899391 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:97123964-97124122 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 81, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:99348885-99348723 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr1:101149985-101150147 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-218 |
| Cow position: | chr1:45097849-45098031 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-239 |
| Cow position: | chr1:18406043-18405837 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-254 |
| Cow position: | chr1:57568103-57568324 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-278 |
| Cow position: | chr1:72136791-72137041 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 102, 50 |
| Conread position: | 35-432 |
| Cow position: | chr1:40513226-40512822 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 6 |
| Conread position: | 35-432 |
| Cow position: | chr1:94253069-94253475 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 46 |
| Conread position: | 36-192 |
| Cow position: | chr1:39543922-39544078 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 36-198 |
| Cow position: | chr1:28801250-28801086 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 5, 46 |
| Conread position: | 36-218 |
| Cow position: | chr1:72039196-72039014 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 151 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 37-197 |
| Cow position: | chr1:8554482-8554642 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 98, 44 |
| Conread position: | 38-197 |
| Cow position: | chr1:40053510-40053669 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 98, 43 |
| Conread position: | 39-278 |
| Cow position: | chr1:102556206-102556443 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 40-197 |
| Cow position: | chr1:17012582-17012425 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 40-198 |
| Cow position: | chr1:1461175-1461018 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 40-198 |
| Cow position: | chr1:28723029-28723190 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 40-198 |
| Cow position: | chr1:69537056-69537211 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 40-198 |
| Cow position: | chr1:87244967-87245125 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 96, 41 |
| Conread position: | 40-200 |
| Cow position: | chr1:82652810-82652974 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 41-165 |
| Cow position: | chr1:99911116-99911240 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-171 |
| Cow position: | chr1:68607386-68607256 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-173 |
| Cow position: | chr1:63605624-63605492 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-178 |
| Cow position: | chr1:79335647-79335510 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-180 |
| Cow position: | chr1:67834982-67834843 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-181 |
| Cow position: | chr1:40684533-40684393 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-182 |
| Cow position: | chr1:56489998-56490139 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr1:42736610-42736751 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr1:69403137-69403279 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr1:69922281-69922139 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr1:72981424-72981566 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr1:85791844-85791986 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:11291948-11291805 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 41-184 |
| Cow position: | chr1:25179873-25179730 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:28873231-28873374 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:30283385-30283242 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:56193774-56193631 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:58883910-58883767 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:59209981-59209838 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:65386485-65386628 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-184 |
| Cow position: | chr1:73070899-73070756 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:85882160-85882302 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:86699060-86698917 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 49 |
| Conread position: | 41-184 |
| Cow position: | chr1:88130928-88131071 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-184 |
| Cow position: | chr1:94659839-94659982 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:95239527-95239670 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr1:102434881-102434739 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-197 |
| Cow position: | chr1:18880235-18880079 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-197 |
| Cow position: | chr1:28711074-28711230 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-197 |
| Cow position: | chr1:31396848-31397004 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 41-197 |
| Cow position: | chr1:61309160-61309317 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-197 |
| Cow position: | chr1:62925771-62925927 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-197 |
| Cow position: | chr1:86547977-86547821 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr1:8825208-8825364 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr1:57366975-57366818 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr1:57656702-57656858 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 41-198 |
| Cow position: | chr1:71562416-71562259 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr1:72186715-72186562 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 132, 40 |
| Conread position: | 41-198 |
| Cow position: | chr1:97226548-97226397 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 19 |
| Conread position: | 41-199 |
| Cow position: | chr1:13450364-13450526 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr1:17036399-17036237 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr1:20829047-20829209 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 41-204 |
| Cow position: | chr1:29362454-29362620 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-213 |
| Cow position: | chr1:82912986-82912815 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-217 |
| Cow position: | chr1:5502091-5502267 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-217 |
| Cow position: | chr1:100597216-100597038 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 95, 50 |
| Conread position: | 41-218 |
| Cow position: | chr1:21087571-21087754 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr1:31365919-31365743 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr1:79636773-79636598 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 41-218 |
| Cow position: | chr1:82564661-82564844 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr1:82924022-82923843 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-218 |
| Cow position: | chr1:91899154-91899337 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-222 |
| Cow position: | chr1:18244227-18244044 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-224 |
| Cow position: | chr1:33851436-33851624 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-224 |
| Cow position: | chr1:40574373-40574560 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 41-224 |
| Cow position: | chr1:56723313-56723501 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 41-224 |
| Cow position: | chr1:69766620-69766809 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-243 |
| Cow position: | chr1:49974033-49973833 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-278 |
| Cow position: | chr1:25887003-25886760 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 43 |
| Conread position: | 41-278 |
| Cow position: | chr1:30027389-30027146 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 44 |
| Conread position: | 41-391 |
| Cow position: | chr1:55322900-55322544 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 43-176 |
| Cow position: | chr1:55276325-55276193 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 43-199 |
| Cow position: | chr1:9382385-9382228 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 43-214 |
| Cow position: | chr1:54365667-54365501 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 43-278 |
| Cow position: | chr1:34689499-34689735 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 44-184 |
| Cow position: | chr1:56163487-56163627 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 44-184 |
| Cow position: | chr1:76622797-76622657 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 44-184 |
| Cow position: | chr1:93854681-93854821 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 44-186 |
| Cow position: | chr1:76545379-76545237 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 44-192 |
| Cow position: | chr1:12062036-12061889 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 93, 37 |
| Conread position: | 44-220 |
| Cow position: | chr1:56144178-56143998 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 47-165 |
| Cow position: | chr1:48245977-48246095 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-184 |
| Cow position: | chr1:52359114-52358977 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-184 |
| Cow position: | chr1:79456809-79456672 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-196 |
| Cow position: | chr1:76752490-76752340 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-198 |
| Cow position: | chr1:21999794-21999643 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 47-198 |
| Cow position: | chr1:87516120-87515969 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 47-260 |
| Cow position: | chr1:67901767-67901548 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-421 |
| Cow position: | chr1:42870079-42869691 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 34 |
| Conread position: | 47-432 |
| Cow position: | chr1:21720052-21720438 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 50-199 |
| Cow position: | chr1:91718472-91718323 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 52-178 |
| Cow position: | chr1:30534857-30534730 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 55-178 |
| Cow position: | chr1:17941616-17941493 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 35 |
| Conread position: | 62-184 |
| Cow position: | chr1:91892945-91892823 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 62-217 |
| Cow position: | chr1:5318921-5319076 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 62-218 |
| Cow position: | chr1:89479484-89479639 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 63-434 |
| Cow position: | chr1:24650935-24651317 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 21 |
| Conread position: | 69-192 |
| Cow position: | chr1:5355312-5355435 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 12 |
| Conread position: | 80-218 |
| Cow position: | chr1:57424643-57424498 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 135-382 |
| Cow position: | chr1:38387456-38387212 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 210-434 |
| Cow position: | chr1:67286840-67287061 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 7, 103 |
Show alignments to all cow chromosomes.