Cow genome map


           Conread name:
           rpgl15_e18.y1
        

               Conread position:
               30-178
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               33-197
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               33-197
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               35-151
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               35-184
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               35-184
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               35-185
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               35-194
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               35-195
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               35-197
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 6
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               35-205
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               96, 6
               

               Conread position:
               35-212
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               101, 48
               

               Conread position:
               35-238
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               40-432
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               41-170
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-171
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-178
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-180
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-183
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               95, 41
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-191
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-196
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-198
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-198
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               41-198
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-199
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-199
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               41-199
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-204
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               96, 34
               

               Conread position:
               41-214
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-278
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               148, 40
               

               Conread position:
               41-278
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               175, 40
               

               Conread position:
               41-278
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               94, 40
               

               Conread position:
               41-280
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               41-434
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               43-280
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               150, 38
               

               Conread position:
               47-218
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               47-278
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               166, 37
               

               Conread position:
               47-310
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               89, 37
               

               Conread position:
               49-218
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               51-346
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 30
               

               Conread position:
               57-218
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               62-197
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               80-221
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               81-183
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               87-276
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 143
               

               Conread position:
               92-198
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               116-278
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               135-381
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               276-431
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               119, 42
               
Show alignments to all cow chromosomes.