Cow genome map
Conread name: | rpgl15_e18.y1 |
Conread position: | 33-182 |
Cow position: | chr11:4041265-4041116 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 123 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 103, 50 |
Conread position: | 35-137 |
Cow position: | chr11:10210149-10210048 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 86 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 35-158 |
Cow position: | chr11:40776729-40776606 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 106 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 101, 46 |
Conread position: | 35-185 |
Cow position: | chr11:30305044-30305196 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 97, 46 |
Conread position: | 35-194 |
Cow position: | chr11:8261889-8261732 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 134 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-194 |
Cow position: | chr11:9220306-9220147 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 133 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-197 |
Cow position: | chr11:87127654-87127813 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 35-198 |
Cow position: | chr11:12351251-12351089 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 139 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr11:37065308-37065142 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 139 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 102, 46 |
Conread position: | 35-199 |
Cow position: | chr11:8519807-8519966 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 83, 6 |
Conread position: | 35-217 |
Cow position: | chr11:25527372-25527557 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 159 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-218 |
Cow position: | chr11:66726278-66726468 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 146 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 97, 10 |
Conread position: | 35-427 |
Cow position: | chr11:10090146-10090554 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 48 |
Conread position: | 36-143 |
Cow position: | chr11:44860714-44860608 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 93 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 100, 12 |
Conread position: | 36-199 |
Cow position: | chr11:34020703-34020867 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 136 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 29, 45 |
Conread position: | 40-198 |
Cow position: | chr11:9659569-9659411 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 134 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 96, 41 |
Conread position: | 40-198 |
Cow position: | chr11:21466895-21467053 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 129 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 96, 41 |
Conread position: | 40-198 |
Cow position: | chr11:37491824-37491670 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 132 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 98, 30 |
Conread position: | 41-165 |
Cow position: | chr11:9734828-9734705 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 106 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-170 |
Cow position: | chr11:41170873-41170744 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-171 |
Cow position: | chr11:12358606-12358476 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-171 |
Cow position: | chr11:19102667-19102537 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-171 |
Cow position: | chr11:28229934-28229804 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 111 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 93, 40 |
Conread position: | 41-171 |
Cow position: | chr11:77728701-77728571 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-178 |
Cow position: | chr11:28054781-28054644 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-178 |
Cow position: | chr11:29668809-29668675 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 106 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-178 |
Cow position: | chr11:37093242-37093106 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 113 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-182 |
Cow position: | chr11:7113416-7113554 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 11 |
Conread position: | 41-184 |
Cow position: | chr11:1496255-1496112 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 126 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:5343398-5343255 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 123 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:10847264-10847404 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 95, 28 |
Conread position: | 41-184 |
Cow position: | chr11:11987927-11988069 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:17107867-17107724 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:24393136-24393279 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:26125112-26124969 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:37477300-37477157 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 121 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:38505785-38505643 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 95, 15 |
Conread position: | 41-184 |
Cow position: | chr11:43514811-43514668 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:52419207-52419350 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:53287636-53287494 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 95, 45 |
Conread position: | 41-184 |
Cow position: | chr11:57628227-57628084 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr11:72110146-72110003 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-191 |
Cow position: | chr11:54209436-54209582 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 41-197 |
Cow position: | chr11:12093376-12093533 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr11:20920926-20920770 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 130 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr11:36744361-36744205 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 125 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr11:61401232-61401076 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 129 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr11:64045817-64045973 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 126 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr11:73477127-73477283 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 129 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 95, 46 |
Conread position: | 41-198 |
Cow position: | chr11:45111188-45111345 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 135 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-199 |
Cow position: | chr11:15983443-15983605 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 132 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-199 |
Cow position: | chr11:67450317-67450479 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 132 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-212 |
Cow position: | chr11:42429152-42429324 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 126 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 94, 40 |
Conread position: | 41-218 |
Cow position: | chr11:3492830-3493013 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 146 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr11:4027744-4027565 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 97, 40 |
Conread position: | 41-218 |
Cow position: | chr11:8244526-8244702 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 95, 24 |
Conread position: | 41-218 |
Cow position: | chr11:19064430-19064247 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 148 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr11:67846752-67846569 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 149 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-224 |
Cow position: | chr11:33194734-33194545 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 144 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 93, 40 |
Conread position: | 41-238 |
Cow position: | chr11:31925987-31926187 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 34, 21 |
Conread position: | 41-239 |
Cow position: | chr11:71329463-71329661 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-382 |
Cow position: | chr11:8282895-8283235 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 43-176 |
Cow position: | chr11:77235536-77235669 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 114 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 93, 38 |
Conread position: | 43-184 |
Cow position: | chr11:63659760-63659626 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 43-432 |
Cow position: | chr11:7316694-7317092 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 37 |
Conread position: | 44-184 |
Cow position: | chr11:85393989-85393849 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 93, 37 |
Conread position: | 47-184 |
Cow position: | chr11:23877127-23877264 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 89, 34 |
Conread position: | 47-184 |
Cow position: | chr11:32450692-32450829 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 117 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 89, 34 |
Conread position: | 48-212 |
Cow position: | chr11:4065407-4065239 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 133 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 82, 33 |
Conread position: | 49-278 |
Cow position: | chr11:17220388-17220161 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 174 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 88, 32 |
Conread position: | 51-192 |
Cow position: | chr11:76374371-76374231 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 86, 30 |
Conread position: | 53-198 |
Cow position: | chr11:8887327-8887182 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 126 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 83, 28 |
Conread position: | 62-178 |
Cow position: | chr11:53432226-53432110 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 74, 28 |
Conread position: | 62-215 |
Cow position: | chr11:28063516-28063667 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 125 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 75, 19 |
Conread position: | 74-194 |
Cow position: | chr11:59369460-59369580 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 62, 7 |
Conread position: | 75-171 |
Cow position: | chr11:15998788-15998885 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 84 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 84-198 |
Cow position: | chr11:8267681-8267566 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 96 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 93-198 |
Cow position: | chr11:256317-256211 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 227-432 |
Cow position: | chr11:7113899-7114099 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 145 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 167, 19 |
Show alignments to all cow chromosomes.