Cow genome map
| Conread name: | rpgl15_e18.y1 |
| Conread position: | 32-184 |
| Cow position: | chr12:22205650-22205499 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 105, 49 |
| Conread position: | 35-184 |
| Cow position: | chr12:1402592-1402739 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-198 |
| Cow position: | chr12:2282646-2282809 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-198 |
| Cow position: | chr12:8311282-8311444 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr12:21902040-21902202 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 35-198 |
| Cow position: | chr12:45261724-45261886 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-223 |
| Cow position: | chr12:18501135-18501315 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 35-226 |
| Cow position: | chr12:2900-3091 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 92, 6 |
| Conread position: | 36-198 |
| Cow position: | chr12:21198061-21198223 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 101, 47 |
| Conread position: | 36-199 |
| Cow position: | chr12:37558657-37558824 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 100, 45 |
| Conread position: | 40-205 |
| Cow position: | chr12:23240109-23240273 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 41-178 |
| Cow position: | chr12:42859721-42859584 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr12:3361010-3361153 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr12:11098348-11098491 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 80 |
| Conread position: | 41-184 |
| Cow position: | chr12:21426800-21426943 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr12:25100955-25100812 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr12:27932839-27932696 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-185 |
| Cow position: | chr12:20998026-20997883 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 41-197 |
| Cow position: | chr12:251951-251794 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-197 |
| Cow position: | chr12:21941871-21942031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 41-197 |
| Cow position: | chr12:33986268-33986424 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-198 |
| Cow position: | chr12:5861260-5861416 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 41-198 |
| Cow position: | chr12:14662527-14662370 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-213 |
| Cow position: | chr12:43031278-43031108 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 41-214 |
| Cow position: | chr12:2838748-2838582 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-218 |
| Cow position: | chr12:32653650-32653833 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-224 |
| Cow position: | chr12:21254550-21254362 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-469 |
| Cow position: | chr12:15951158-15950728 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 44-198 |
| Cow position: | chr12:22332733-22332887 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 44-217 |
| Cow position: | chr12:28765910-28765737 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 47-238 |
| Cow position: | chr12:6406536-6406348 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 80-198 |
| Cow position: | chr12:31544922-31545041 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 89-197 |
| Cow position: | chr12:4157530-4157639 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.