Cow genome map

Conread name: rpgl15_e18.y1

Conread position: 35-172
Cow position: chr18:114587-114722 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 10

Conread position: 35-178
Cow position: chr18:37505260-37505401 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 10

Conread position: 35-184
Cow position: chr18:28973708-28973559 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 46

Conread position: 35-184
Cow position: chr18:51481034-51481183 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 45

Conread position: 35-191
Cow position: chr18:33359061-33359217 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 136
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 101, 6

Conread position: 35-191
Cow position: chr18:43146731-43146574 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 102, 46

Conread position: 35-192
Cow position: chr18:2019490-2019335 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 133
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 101, 46

Conread position: 35-192
Cow position: chr18:35335675-35335831 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 131
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:19539384-19539227 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 6, 0

Conread position: 35-198
Cow position: chr18:23944179-23944015 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 141
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:32293962-32294116 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 35-198
Cow position: chr18:33269021-33269183 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:39748774-39748935 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:47719388-47719226 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 133
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:48222075-48222236 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 139
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 101, 6

Conread position: 35-198
Cow position: chr18:53786035-53786195 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 101, 10

Conread position: 35-199
Cow position: chr18:51310781-51310942 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 101, 6

Conread position: 35-218
Cow position: chr18:51258179-51258361 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 101, 6

Conread position: 37-184
Cow position: chr18:24040536-24040388 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 127
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 99, 44

Conread position: 37-220
Cow position: chr18:16534175-16534360 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 99, 47

Conread position: 40-198
Cow position: chr18:17992221-17992063 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 41

Conread position: 41-174
Cow position: chr18:19352586-19352719 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 115
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 95, 40

Conread position: 41-178
Cow position: chr18:14416177-14416313 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 40

Conread position: 41-178
Cow position: chr18:52651120-52651257 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 45

Conread position: 41-184
Cow position: chr18:16176413-16176274 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 41-184
Cow position: chr18:23797848-23797991 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 40

Conread position: 41-184
Cow position: chr18:36508533-36508676 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 95, 40

Conread position: 41-184
Cow position: chr18:40478584-40478726 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 40

Conread position: 41-184
Cow position: chr18:41840624-41840481 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 40

Conread position: 41-184
Cow position: chr18:47742219-47742362 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 123
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 95, 40

Conread position: 41-197
Cow position: chr18:22602688-22602844 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 40

Conread position: 41-197
Cow position: chr18:33953368-33953218 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 40

Conread position: 41-197
Cow position: chr18:51689825-51689981 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 130
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 95, 40

Conread position: 41-199
Cow position: chr18:51341887-51342049 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 40

Conread position: 41-213
Cow position: chr18:55088724-55088552 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 40

Conread position: 41-216
Cow position: chr18:14130585-14130759 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 40

Conread position: 41-218
Cow position: chr18:11274905-11274722 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 40

Conread position: 41-218
Cow position: chr18:16078918-16079099 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 95, 40

Conread position: 41-218
Cow position: chr18:51462877-51462695 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 40

Conread position: 41-238
Cow position: chr18:27987261-27987461 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 40

Conread position: 41-278
Cow position: chr18:29763571-29763812 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 175, 40

Conread position: 41-286
Cow position: chr18:2886820-2886564 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 22

Conread position: 41-428
Cow position: chr18:54171659-54171271 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 41-504
Cow position: chr18:56462702-56462234 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 40

Conread position: 42-198
Cow position: chr18:6869057-6868901 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 134
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 39

Conread position: 43-435
Cow position: chr18:29237012-29237417 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 9

Conread position: 44-184
Cow position: chr18:27838112-27837973 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 39

Conread position: 44-184
Cow position: chr18:54003729-54003864 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 44-278
Cow position: chr18:16843134-16842892 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 91, 37

Conread position: 48-218
Cow position: chr18:37599334-37599165 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 87, 33

Conread position: 50-198
Cow position: chr18:24700905-24700755 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 53-192
Cow position: chr18:33336075-33336214 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 28

Conread position: 62-214
Cow position: chr18:51629663-51629809 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 67-199
Cow position: chr18:1521372-1521504 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 14

Conread position: 68-198
Cow position: chr18:54044494-54044365 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 13

Show alignments to all cow chromosomes.