Cow genome map
Conread name: | rpgl15_e18.y1 |
Conread position: | 35-172 |
Cow position: | chr18:114587-114722 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 114 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 101, 10 |
Conread position: | 35-178 |
Cow position: | chr18:37505260-37505401 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 101, 10 |
Conread position: | 35-184 |
Cow position: | chr18:28973708-28973559 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 101, 46 |
Conread position: | 35-184 |
Cow position: | chr18:51481034-51481183 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 101, 45 |
Conread position: | 35-191 |
Cow position: | chr18:33359061-33359217 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 136 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-191 |
Cow position: | chr18:43146731-43146574 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 131 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 102, 46 |
Conread position: | 35-192 |
Cow position: | chr18:2019490-2019335 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 133 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 101, 46 |
Conread position: | 35-192 |
Cow position: | chr18:35335675-35335831 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 131 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:19539384-19539227 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 134 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 35-198 |
Cow position: | chr18:23944179-23944015 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 141 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:32293962-32294116 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 35-198 |
Cow position: | chr18:33269021-33269183 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:39748774-39748935 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 135 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:47719388-47719226 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:48222075-48222236 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 139 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr18:53786035-53786195 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 131 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 101, 10 |
Conread position: | 35-199 |
Cow position: | chr18:51310781-51310942 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 135 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-218 |
Cow position: | chr18:51258179-51258361 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 144 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 37-184 |
Cow position: | chr18:24040536-24040388 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 127 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 99, 44 |
Conread position: | 37-220 |
Cow position: | chr18:16534175-16534360 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 144 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 99, 47 |
Conread position: | 40-198 |
Cow position: | chr18:17992221-17992063 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 134 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 96, 41 |
Conread position: | 41-174 |
Cow position: | chr18:19352586-19352719 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 115 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-178 |
Cow position: | chr18:14416177-14416313 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-178 |
Cow position: | chr18:52651120-52651257 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 113 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 96, 45 |
Conread position: | 41-184 |
Cow position: | chr18:16176413-16176274 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 41-184 |
Cow position: | chr18:23797848-23797991 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr18:36508533-36508676 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr18:40478584-40478726 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr18:41840624-41840481 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-184 |
Cow position: | chr18:47742219-47742362 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 123 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr18:22602688-22602844 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr18:33953368-33953218 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 97, 40 |
Conread position: | 41-197 |
Cow position: | chr18:51689825-51689981 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 130 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-199 |
Cow position: | chr18:51341887-51342049 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 134 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-213 |
Cow position: | chr18:55088724-55088552 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 135 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-216 |
Cow position: | chr18:14130585-14130759 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr18:11274905-11274722 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 144 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr18:16078918-16079099 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 146 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr18:51462877-51462695 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 145 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-238 |
Cow position: | chr18:27987261-27987461 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 146 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-278 |
Cow position: | chr18:29763571-29763812 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 175, 40 |
Conread position: | 41-286 |
Cow position: | chr18:2886820-2886564 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 22 |
Conread position: | 41-428 |
Cow position: | chr18:54171659-54171271 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-504 |
Cow position: | chr18:56462702-56462234 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 42-198 |
Cow position: | chr18:6869057-6868901 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 134 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 94, 39 |
Conread position: | 43-435 |
Cow position: | chr18:29237012-29237417 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 9 |
Conread position: | 44-184 |
Cow position: | chr18:27838112-27837973 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 98, 39 |
Conread position: | 44-184 |
Cow position: | chr18:54003729-54003864 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 44-278 |
Cow position: | chr18:16843134-16842892 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 185 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 91, 37 |
Conread position: | 48-218 |
Cow position: | chr18:37599334-37599165 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 87, 33 |
Conread position: | 50-198 |
Cow position: | chr18:24700905-24700755 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 53-192 |
Cow position: | chr18:33336075-33336214 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 112 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 83, 28 |
Conread position: | 62-214 |
Cow position: | chr18:51629663-51629809 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 113 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 67-199 |
Cow position: | chr18:1521372-1521504 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 113 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 69, 14 |
Conread position: | 68-198 |
Cow position: | chr18:54044494-54044365 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 69, 13 |
Show alignments to all cow chromosomes.