Cow genome map


           Conread name:
           rpgl15_e18.y1
        

               Conread position:
               6-184
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 80
               

               Conread position:
               11-198
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               125, 16
               

               Conread position:
               33-432
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               35-178
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               35-184
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               35-197
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               101, 10
               

               Conread position:
               35-198
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               35-217
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               40-197
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               96, 39
               

               Conread position:
               41-154
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-160
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               94, 40
               

               Conread position:
               41-171
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-177
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 40
               

               Conread position:
               41-178
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               41-183
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               94, 40
               

               Conread position:
               41-183
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-184
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               41-197
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-199
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-199
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               92, 40
               

               Conread position:
               41-218
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-219
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               95, 40
               

               Conread position:
               41-238
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 39
               

               Conread position:
               41-259
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               41-278
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               175, 40
               

               Conread position:
               41-290
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 43
               

               Conread position:
               44-193
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               92, 37
               

               Conread position:
               46-198
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               47-178
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               47-191
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               47-198
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               47-198
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               51-433
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               272
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               57-432
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               61-398
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 20
               

               Conread position:
               65-319
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               42, 16
               

               Conread position:
               75-197
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 6
               

               Conread position:
               135-432
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               168-433
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               168-433
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               48, 168
               

               Conread position:
               233-434
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               149, 92
               
Show alignments to all cow chromosomes.