Cow genome map
| Conread name: | rpgl15_e18.y1 |
| Conread position: | 33-205 |
| Cow position: | chr20:12438606-12438435 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 35-184 |
| Cow position: | chr20:13763060-13763209 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-184 |
| Cow position: | chr20:25850835-25850686 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-185 |
| Cow position: | chr20:24614691-24614841 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 61, 6 |
| Conread position: | 35-191 |
| Cow position: | chr20:8313283-8313127 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 35-195 |
| Cow position: | chr20:15947222-15947064 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 35-196 |
| Cow position: | chr20:3033218-3033379 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr20:3251977-3251816 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 102, 6 |
| Conread position: | 35-198 |
| Cow position: | chr20:5484346-5484509 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 6 |
| Conread position: | 38-198 |
| Cow position: | chr20:15064925-15065084 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 41-178 |
| Cow position: | chr20:29948661-29948798 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr20:21914489-21914631 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 41-184 |
| Cow position: | chr20:5535099-5535242 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr20:8004064-8003921 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr20:23799048-23799190 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-184 |
| Cow position: | chr20:27869359-27869502 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-191 |
| Cow position: | chr20:7116307-7116157 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-197 |
| Cow position: | chr20:5560553-5560397 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr20:3684326-3684168 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 138 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-213 |
| Cow position: | chr20:19438109-19438278 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 145, 40 |
| Conread position: | 41-218 |
| Cow position: | chr20:822929-823112 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr20:9953824-9953651 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr20:10845960-10845781 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-218 |
| Cow position: | chr20:10856871-10856698 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 41-218 |
| Cow position: | chr20:21393755-21393934 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-219 |
| Cow position: | chr20:3270866-3271045 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 41-239 |
| Cow position: | chr20:15292172-15292370 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-267 |
| Cow position: | chr20:13679896-13679660 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 95, 42 |
| Conread position: | 43-197 |
| Cow position: | chr20:25961267-25961421 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 47-170 |
| Cow position: | chr20:28160939-28161061 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 47-184 |
| Cow position: | chr20:28565428-28565291 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-200 |
| Cow position: | chr20:35104462-35104309 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 48-183 |
| Cow position: | chr20:35119739-35119873 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 88, 33 |
| Conread position: | 50-184 |
| Cow position: | chr20:15097706-15097572 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 66-198 |
| Cow position: | chr20:19495170-19495304 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 67-184 |
| Cow position: | chr20:23469478-23469361 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 14 |
| Conread position: | 81-432 |
| Cow position: | chr20:18315411-18315062 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 233 |
| Conread position: | 251-434 |
| Cow position: | chr20:8215554-8215739 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 148 |
Show alignments to all cow chromosomes.