Cow genome map
| Conread name: | rpgl15_e18.y1 |
| Conread position: | 33-199 |
| Cow position: | chr24:35838429-35838265 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 33-278 |
| Cow position: | chr24:16376712-16376949 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 35-174 |
| Cow position: | chr24:4415341-4415202 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 46 |
| Conread position: | 35-215 |
| Cow position: | chr24:12237242-12237419 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 100, 46 |
| Conread position: | 35-218 |
| Cow position: | chr24:14585265-14585444 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-257 |
| Cow position: | chr24:6537728-6537951 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 40-298 |
| Cow position: | chr24:14333236-14333504 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 40-434 |
| Cow position: | chr24:36559894-36559504 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 41 |
| Conread position: | 41-135 |
| Cow position: | chr24:22952330-22952423 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 41-168 |
| Cow position: | chr24:44017740-44017867 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-174 |
| Cow position: | chr24:6645897-6646030 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-177 |
| Cow position: | chr24:15392144-15392010 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 39 |
| Conread position: | 41-184 |
| Cow position: | chr24:148425-148282 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr24:5993035-5992892 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 41-184 |
| Cow position: | chr24:12485123-12484980 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr24:22793366-22793509 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 41-184 |
| Cow position: | chr24:29187477-29187620 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr24:33739143-33739003 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-192 |
| Cow position: | chr24:6084211-6084362 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-192 |
| Cow position: | chr24:7061583-7061734 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-197 |
| Cow position: | chr24:6434434-6434592 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 41-197 |
| Cow position: | chr24:8030345-8030501 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 95, 45 |
| Conread position: | 41-197 |
| Cow position: | chr24:17696779-17696628 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 48 |
| Conread position: | 41-197 |
| Cow position: | chr24:40549068-40549224 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr24:6145562-6145719 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 95, 38 |
| Conread position: | 41-198 |
| Cow position: | chr24:12086392-12086549 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr24:33933560-33933717 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr24:16084466-16084303 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 41-211 |
| Cow position: | chr24:37217194-37217364 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-213 |
| Cow position: | chr24:12113852-12113676 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-218 |
| Cow position: | chr24:9092088-9091914 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-238 |
| Cow position: | chr24:19833579-19833776 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 41-274 |
| Cow position: | chr24:36708040-36708277 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-277 |
| Cow position: | chr24:1447750-1447996 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 41-422 |
| Cow position: | chr24:16649123-16648735 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 43 |
| Conread position: | 41-432 |
| Cow position: | chr24:12797574-12797176 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 43-191 |
| Cow position: | chr24:9188535-9188387 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 47-184 |
| Cow position: | chr24:12335574-12335438 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 47-198 |
| Cow position: | chr24:14384415-14384264 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 89, 34 |
| Conread position: | 47-224 |
| Cow position: | chr24:35841422-35841244 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 93, 30 |
| Conread position: | 48-184 |
| Cow position: | chr24:6024895-6024761 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 60-199 |
| Cow position: | chr24:6660386-6660246 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 65-194 |
| Cow position: | chr24:6335901-6336029 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 66-199 |
| Cow position: | chr24:43813983-43814120 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 15 |
Show alignments to all cow chromosomes.