Cow genome map
| Conread name: | rpgl15_e18.y1 |
| Conread position: | 32-184 |
| Cow position: | chr25:12942559-12942407 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 105, 49 |
| Conread position: | 33-143 |
| Cow position: | chr25:18027483-18027373 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 35-191 |
| Cow position: | chr25:11375203-11375048 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-194 |
| Cow position: | chr25:33665728-33665570 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 6 |
| Conread position: | 35-198 |
| Cow position: | chr25:14016310-14016472 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 35-198 |
| Cow position: | chr25:17468553-17468395 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 6 |
| Conread position: | 35-198 |
| Cow position: | chr25:18060455-18060295 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 6 |
| Conread position: | 35-198 |
| Cow position: | chr25:34656301-34656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 101, 10 |
| Conread position: | 41-165 |
| Cow position: | chr25:25506800-25506923 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 26 |
| Conread position: | 41-178 |
| Cow position: | chr25:22147645-22147782 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-183 |
| Cow position: | chr25:26922367-26922508 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr25:13781180-13781323 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-184 |
| Cow position: | chr25:18889866-18889722 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 41-191 |
| Cow position: | chr25:27022416-27022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 41-197 |
| Cow position: | chr25:35362279-35362123 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-198 |
| Cow position: | chr25:18303551-18303707 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr25:17589404-17589242 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr25:18194948-18194786 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-199 |
| Cow position: | chr25:19917234-19917396 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-207 |
| Cow position: | chr25:18275683-18275512 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 41-212 |
| Cow position: | chr25:36240706-36240870 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 41-224 |
| Cow position: | chr25:12759447-12759265 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 175, 40 |
| Conread position: | 41-238 |
| Cow position: | chr25:34346867-34346670 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 40 |
| Conread position: | 41-239 |
| Cow position: | chr25:26279407-26279607 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 41-278 |
| Cow position: | chr25:11933380-11933132 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 41-278 |
| Cow position: | chr25:18093160-18093407 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 43-183 |
| Cow position: | chr25:20776746-20776610 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 43-184 |
| Cow position: | chr25:32580118-32580258 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 93, 38 |
| Conread position: | 47-185 |
| Cow position: | chr25:9544219-9544355 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 88, 26 |
| Conread position: | 47-197 |
| Cow position: | chr25:6172059-6172209 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 47-197 |
| Cow position: | chr25:34014330-34014182 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 47-198 |
| Cow position: | chr25:8675072-8675223 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 89, 33 |
| Conread position: | 47-217 |
| Cow position: | chr25:17560476-17560309 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 89, 34 |
Show alignments to all cow chromosomes.