Cow genome map
Conread name: | rpgl15_e18.y1 |
Conread position: | 23-235 |
Cow position: | chr6:20561052-20560841 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 113, 25 |
Conread position: | 26-184 |
Cow position: | chr6:8201800-8201957 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 110, 15 |
Conread position: | 26-255 |
Cow position: | chr6:27529944-27529717 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 110, 15 |
Conread position: | 33-278 |
Cow position: | chr6:35420537-35420286 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 11, 24 |
Conread position: | 35-181 |
Cow position: | chr6:66231864-66232011 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 67, 45 |
Conread position: | 35-185 |
Cow position: | chr6:65007760-65007907 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 126 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-197 |
Cow position: | chr6:40315124-40315277 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 35-198 |
Cow position: | chr6:19453989-19454149 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 135 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-198 |
Cow position: | chr6:65928007-65928170 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 131 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 101, 46 |
Conread position: | 35-199 |
Cow position: | chr6:10558588-10558425 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 133 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 101, 6 |
Conread position: | 35-217 |
Cow position: | chr6:13276872-13277056 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 143 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 101, 10 |
Conread position: | 40-432 |
Cow position: | chr6:43608282-43607887 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 41 |
Conread position: | 41-165 |
Cow position: | chr6:5951169-5951045 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-165 |
Cow position: | chr6:28275059-28275183 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-177 |
Cow position: | chr6:25214335-25214470 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 94, 49 |
Conread position: | 41-178 |
Cow position: | chr6:6566682-6566819 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 113 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-178 |
Cow position: | chr6:17046132-17046269 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-178 |
Cow position: | chr6:64715306-64715443 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 112 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:2374777-2374920 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 121 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:2554783-2554926 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 95, 42 |
Conread position: | 41-184 |
Cow position: | chr6:3277873-3277730 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:13104135-13104278 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 123 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:13847112-13847252 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 119 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:16051957-16052100 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 121 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:24239142-24239285 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:27169654-27169801 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 121 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 64, 40 |
Conread position: | 41-184 |
Cow position: | chr6:28491437-28491294 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 120 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:30275101-30274959 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-184 |
Cow position: | chr6:33459940-33460083 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 119 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 94, 40 |
Conread position: | 41-184 |
Cow position: | chr6:34127430-34127573 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 119 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:34892929-34892786 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 94, 40 |
Conread position: | 41-184 |
Cow position: | chr6:35876641-35876498 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-184 |
Cow position: | chr6:40251740-40251883 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 95, 45 |
Conread position: | 41-184 |
Cow position: | chr6:55544250-55544107 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-184 |
Cow position: | chr6:58408835-58408692 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 120 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-191 |
Cow position: | chr6:65822049-65821898 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 123 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-197 |
Cow position: | chr6:7866674-7866518 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 129 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-197 |
Cow position: | chr6:28063413-28063571 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-198 |
Cow position: | chr6:27469328-27469481 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 95, 37 |
Conread position: | 41-198 |
Cow position: | chr6:29311568-29311725 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 41-198 |
Cow position: | chr6:65880944-65881101 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 125 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-199 |
Cow position: | chr6:44029120-44029278 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 128 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-200 |
Cow position: | chr6:3488321-3488163 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-214 |
Cow position: | chr6:32330713-32330544 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 132 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 41-215 |
Cow position: | chr6:65841661-65841834 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 127 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-217 |
Cow position: | chr6:40554509-40554334 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-218 |
Cow position: | chr6:1405161-1404978 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr6:1411863-1411680 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr6:3149081-3149264 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 148 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr6:13943986-13944167 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 145 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr6:26670781-26670598 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 148 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-218 |
Cow position: | chr6:44150479-44150297 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 140 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-218 |
Cow position: | chr6:65899826-65899647 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 61, 40 |
Conread position: | 41-218 |
Cow position: | chr6:68026869-68027052 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 149 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 95, 40 |
Conread position: | 41-243 |
Cow position: | chr6:30479176-30479380 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 159 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-270 |
Cow position: | chr6:7179619-7179383 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 92, 40 |
Conread position: | 41-304 |
Cow position: | chr6:10641237-10641509 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 42 |
Conread position: | 41-385 |
Cow position: | chr6:38232354-38232706 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 40 |
Conread position: | 41-434 |
Cow position: | chr6:37116216-37116602 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 28 |
Conread position: | 42-199 |
Cow position: | chr6:331390-331230 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 131 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 94, 30 |
Conread position: | 43-199 |
Cow position: | chr6:39908606-39908766 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 134 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 93, 38 |
Conread position: | 44-184 |
Cow position: | chr6:15141100-15140960 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 116 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 92, 37 |
Conread position: | 44-184 |
Cow position: | chr6:15280472-15280332 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 92, 37 |
Conread position: | 44-198 |
Cow position: | chr6:28105764-28105612 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 94, 31 |
Conread position: | 44-199 |
Cow position: | chr6:17598199-17598040 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 133 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 92, 37 |
Conread position: | 47-178 |
Cow position: | chr6:913725-913867 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 90, 34 |
Conread position: | 47-178 |
Cow position: | chr6:8761221-8761091 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 90, 34 |
Conread position: | 47-198 |
Cow position: | chr6:36526126-36526280 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 37 |
Conread position: | 47-199 |
Cow position: | chr6:43617798-43617954 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 89, 36 |
Conread position: | 47-218 |
Cow position: | chr6:7141403-7141227 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 141 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 89, 34 |
Conread position: | 48-178 |
Cow position: | chr6:3889395-3889265 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 110 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 88, 33 |
Conread position: | 48-218 |
Cow position: | chr6:59919201-59919029 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 134 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 88, 33 |
Conread position: | 49-278 |
Cow position: | chr6:59740973-59740734 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 88, 32 |
Conread position: | 52-171 |
Cow position: | chr6:33388926-33389048 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 101 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 85, 29 |
Conread position: | 57-159 |
Cow position: | chr6:9738793-9738895 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 90 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 79, 24 |
Conread position: | 60-224 |
Cow position: | chr6:1822544-1822380 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 76, 21 |
Conread position: | 61-178 |
Cow position: | chr6:58026855-58026971 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 97 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 75, 16 |
Conread position: | 62-238 |
Cow position: | chr6:47043101-47042925 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 128 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 74, 19 |
Conread position: | 64-197 |
Cow position: | chr6:10499624-10499491 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 72, 17 |
Conread position: | 65-391 |
Cow position: | chr6:6476388-6476063 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 16 |
Conread position: | 66-198 |
Cow position: | chr6:52693125-52693257 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 70, 15 |
Conread position: | 68-198 |
Cow position: | chr6:12650845-12650715 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 70, 13 |
Conread position: | 80-197 |
Cow position: | chr6:65914328-65914445 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 95 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 53, 91 |
Conread position: | 86-184 |
Cow position: | chr6:40275209-40275308 (view UCSC Genome Browser custom track) |
Alignm length: | 100 |
Alignm identity: | 84 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 87-218 |
Cow position: | chr6:49520197-49520063 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 50, 25 |
Conread position: | 91-197 |
Cow position: | chr6:24323255-24323148 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 87 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 257-434 |
Cow position: | chr6:35419849-35419674 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 128 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 138, 26 |
Show alignments to all cow chromosomes.