Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-243
Cow position: chr15:37370531-37370770 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 133

Conread position: 1-266
Cow position: chr15:36435856-36436118 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 49, 159

Conread position: 1-267
Cow position: chr15:13641414-13641148 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 15, 161

Conread position: 1-273
Cow position: chr15:33605570-33605838 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 1-278
Cow position: chr15:6380593-6380870 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 49, 166

Conread position: 1-322
Cow position: chr15:52390473-52390806 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 1-345
Cow position: chr15:31086190-31086532 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 137

Conread position: 1-418
Cow position: chr15:10839284-10838862 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 83

Conread position: 1-420
Cow position: chr15:17773025-17773458 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-441
Cow position: chr15:22095751-22096196 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 1-459
Cow position: chr15:34140665-34141126 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 160

Conread position: 1-461
Cow position: chr15:1128672-1129146 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 138

Conread position: 1-463
Cow position: chr15:7575126-7574651 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 98

Conread position: 1-468
Cow position: chr15:7841643-7841163 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 75

Conread position: 1-477
Cow position: chr15:794378-793890 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 106

Conread position: 1-480
Cow position: chr15:22855233-22855724 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 159

Conread position: 1-483
Cow position: chr15:45244912-45244428 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-484
Cow position: chr15:5242733-5243212 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 1-484
Cow position: chr15:6331423-6330949 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 31

Conread position: 1-486
Cow position: chr15:3257191-3257679 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 1-486
Cow position: chr15:17193234-17193737 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 8

Conread position: 1-487
Cow position: chr15:4713232-4712732 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-487
Cow position: chr15:5983953-5983452 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 1-489
Cow position: chr15:336999-336508 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 338
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 49, 112

Conread position: 1-489
Cow position: chr15:442466-442964 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 166

Conread position: 1-489
Cow position: chr15:608806-609296 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 62

Conread position: 1-489
Cow position: chr15:1329461-1328975 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 1-489
Cow position: chr15:1776484-1775984 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 1-489
Cow position: chr15:2015793-2015297 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 157

Conread position: 1-489
Cow position: chr15:2805949-2806431 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 1-489
Cow position: chr15:2898932-2899435 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 1-489
Cow position: chr15:3720818-3721310 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 1-489
Cow position: chr15:4218595-4219091 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 148

Conread position: 1-489
Cow position: chr15:4389071-4388570 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:4626101-4626596 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 81

Conread position: 1-489
Cow position: chr15:4728473-4727987 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 66

Conread position: 1-489
Cow position: chr15:4769827-4769327 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:4829652-4829159 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 1-489
Cow position: chr15:4925469-4924981 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 1-489
Cow position: chr15:5913270-5913755 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:6152320-6152821 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 1-489
Cow position: chr15:6464385-6463896 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 1-489
Cow position: chr15:7271664-7271158 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 166

Conread position: 1-489
Cow position: chr15:7319889-7319389 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 1-489
Cow position: chr15:7548166-7547691 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 23

Conread position: 1-489
Cow position: chr15:7553940-7553430 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 345
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 50, 159

Conread position: 1-489
Cow position: chr15:8629629-8629131 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 139

Conread position: 1-489
Cow position: chr15:11628721-11628225 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 14

Conread position: 1-489
Cow position: chr15:12417391-12417887 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 159

Conread position: 1-489
Cow position: chr15:13076849-13076343 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 1-489
Cow position: chr15:14572999-14573484 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 1-489
Cow position: chr15:15343785-15344280 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:16787317-16787808 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 147

Conread position: 1-489
Cow position: chr15:17034310-17034804 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:18019070-18019560 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 28

Conread position: 1-489
Cow position: chr15:18214892-18214394 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 1-489
Cow position: chr15:18661810-18661310 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 1-489
Cow position: chr15:20413898-20413398 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:21608085-21607598 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 143

Conread position: 1-489
Cow position: chr15:21826190-21825688 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr15:24797151-24796689 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 53

Conread position: 1-489
Cow position: chr15:26933367-26932865 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 154

Conread position: 1-489
Cow position: chr15:27747191-27747697 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position: chr15:28071113-28071609 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 162

Conread position: 1-489
Cow position: chr15:28236299-28235820 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 335
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 162

Conread position: 1-489
Cow position: chr15:31357277-31357775 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 160

Conread position: 1-489
Cow position: chr15:32064970-32065466 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 1-489
Cow position: chr15:33228734-33229228 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 160

Conread position: 1-489
Cow position: chr15:33700841-33700329 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 1-489
Cow position: chr15:35749975-35750473 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 126

Conread position: 1-489
Cow position: chr15:36940059-36940559 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 1-489
Cow position: chr15:39090901-39091375 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 20

Conread position: 1-489
Cow position: chr15:41360318-41359826 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 45

Conread position: 1-489
Cow position: chr15:42533362-42532873 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 94

Conread position: 1-489
Cow position: chr15:42940232-42939734 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 1-489
Cow position: chr15:48557043-48556542 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 1-489
Cow position: chr15:50344414-50344907 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 3-489
Cow position: chr15:13683650-13683166 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 17

Conread position: 4-266
Cow position: chr15:53352920-53352658 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 156

Conread position: 4-473
Cow position: chr15:35739550-35739079 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 4-489
Cow position: chr15:6550293-6550791 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 4-489
Cow position: chr15:13388016-13388523 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 137

Conread position: 4-489
Cow position: chr15:24044074-24043599 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 110

Conread position: 5-293
Cow position: chr15:4918429-4918139 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 7-489
Cow position: chr15:40343937-40344424 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 8-228
Cow position: chr15:5461142-5460917 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 153

Conread position: 8-447
Cow position: chr15:17214686-17215115 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 309
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 148

Conread position: 8-485
Cow position: chr15:12456437-12455959 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 117

Conread position: 8-489
Cow position: chr15:13545765-13546229 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 84

Conread position: 8-489
Cow position: chr15:20347955-20348440 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 150

Conread position: 8-489
Cow position: chr15:44073762-44073270 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 152

Conread position: 9-365
Cow position: chr15:21910982-21911348 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 112

Conread position: 9-378
Cow position: chr15:41793014-41793395 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 151

Conread position: 9-382
Cow position: chr15:22752113-22752485 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-411
Cow position: chr15:8937720-8937311 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 151

Conread position: 9-487
Cow position: chr15:4689344-4688858 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 130

Conread position: 9-487
Cow position: chr15:5498370-5497884 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 9-487
Cow position: chr15:47201246-47201743 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 163

Conread position: 9-489
Cow position: chr15:6120694-6120200 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 150

Conread position: 9-489
Cow position: chr15:7578476-7577989 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 10

Conread position: 9-489
Cow position: chr15:8028702-8029185 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 73

Conread position: 9-489
Cow position: chr15:14757499-14757004 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 152

Conread position: 9-489
Cow position: chr15:19725063-19724591 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 145

Conread position: 9-489
Cow position: chr15:21532824-21533314 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 79

Conread position: 9-489
Cow position: chr15:29884006-29884488 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position: chr15:37382278-37382766 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 41

Conread position: 9-489
Cow position: chr15:38683849-38684308 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 104

Conread position: 10-461
Cow position: chr15:1082747-1082282 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 129

Conread position: 10-485
Cow position: chr15:12440027-12439574 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 129

Conread position: 10-489
Cow position: chr15:36671472-36670999 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 82

Conread position: 10-489
Cow position: chr15:51910210-51910713 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 158

Conread position: 12-315
Cow position: chr15:25907880-25908181 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 38, 27

Conread position: 16-489
Cow position: chr15:23561329-23560858 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 141

Conread position: 23-322
Cow position: chr15:39406966-39407268 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 23-424
Cow position: chr15:24568751-24569165 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 137

Conread position: 23-486
Cow position: chr15:2925505-2925037 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 24-489
Cow position: chr15:19734498-19734976 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 136

Conread position: 25-489
Cow position: chr15:22713024-22712552 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 122

Conread position: 27-489
Cow position: chr15:2928556-2928082 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 133

Conread position: 31-306
Cow position: chr15:8001273-8001544 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 99

Conread position: 46-293
Cow position: chr15:32225975-32225741 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 108

Conread position: 49-311
Cow position: chr15:29899739-29899486 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 49

Conread position: 49-361
Cow position: chr15:51683150-51682841 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 27, 101

Conread position: 49-489
Cow position: chr15:26158272-26157833 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 322
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 242, 43

Conread position: 51-489
Cow position: chr15:29340833-29341282 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 106

Conread position: 52-243
Cow position: chr15:24863000-24862813 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 27, 50

Conread position: 53-322
Cow position: chr15:30725981-30726233 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 33, 81

Conread position: 54-308
Cow position: chr15:52740361-52740116 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 61

Conread position: 54-487
Cow position: chr15:16515468-16515035 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 54-489
Cow position: chr15:10569913-10569500 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 103

Conread position: 56-489
Cow position: chr15:4628976-4629423 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 56-489
Cow position: chr15:42418687-42419123 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 90

Conread position: 57-489
Cow position: chr15:5198218-5197778 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 58-268
Cow position: chr15:31161030-31161236 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 97

Conread position: 63-318
Cow position: chr15:6494302-6494054 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 11

Conread position: 65-445
Cow position: chr15:47842341-47841955 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 44

Conread position: 69-413
Cow position: chr15:29811470-29811845 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 17, 216

Conread position: 69-487
Cow position: chr15:22162029-22162431 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 7

Conread position: 71-489
Cow position: chr15:17236643-17237050 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 70

Conread position: 72-290
Cow position: chr15:40006730-40006507 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 50

Conread position: 72-487
Cow position: chr15:33527325-33527734 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 72-489
Cow position: chr15:2080578-2080154 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 74-453
Cow position: chr15:6367244-6367628 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 76-489
Cow position: chr15:9909860-9910278 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 77

Conread position: 83-486
Cow position: chr15:52867862-52867462 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 212, 51

Conread position: 84-327
Cow position: chr15:4730863-4730634 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 87, 61

Conread position: 84-489
Cow position: chr15:10476896-10477302 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 69

Conread position: 94-489
Cow position: chr15:32689711-32690103 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 139, 59

Conread position: 98-417
Cow position: chr15:53356987-53357315 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 55

Conread position: 111-489
Cow position: chr15:4815761-4815382 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 123

Conread position: 119-489
Cow position: chr15:36622472-36622839 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 34

Conread position: 155-447
Cow position: chr15:21453300-21453002 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 140, 20

Conread position: 155-489
Cow position: chr15:23774460-23774126 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 25

Conread position: 159-425
Cow position: chr15:33455524-33455258 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 134, 16

Conread position: 168-489
Cow position: chr15:52464091-52464425 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 222
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 140, 104

Conread position: 180-489
Cow position: chr15:5003958-5004260 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 85

Conread position: 180-489
Cow position: chr15:32717472-32717788 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 147, 91

Conread position: 181-489
Cow position: chr15:29273102-29273419 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 90

Conread position: 182-489
Cow position: chr15:23172936-23173246 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 49, 15

Conread position: 183-489
Cow position: chr15:36355927-36356246 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 138, 92

Conread position: 185-489
Cow position: chr15:24097735-24097424 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 85

Conread position: 193-489
Cow position: chr15:9522067-9522377 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 115, 78

Conread position: 198-489
Cow position: chr15:25554266-25553965 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 68

Conread position: 201-486
Cow position: chr15:4077009-4077303 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 107, 71

Conread position: 201-489
Cow position: chr15:17296123-17295823 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 39

Conread position: 206-474
Cow position: chr15:51632224-51631961 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 60

Conread position: 213-489
Cow position: chr15:2021338-2021624 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 57

Conread position: 233-487
Cow position: chr15:11290689-11290945 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 70, 37

Conread position: 234-489
Cow position: chr15:1601657-1601389 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 36

Conread position: 251-489
Cow position: chr15:26077798-26077557 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 77, 20

Conread position: 255-487
Cow position: chr15:1298586-1298828 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 73, 15

Conread position: 256-489
Cow position: chr15:38937835-38937591 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 64, 14

Conread position: 314-489
Cow position: chr15:4380327-4380499 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 75, 43

Conread position: 314-489
Cow position: chr15:4654466-4654291 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 72, 43

Conread position: 321-489
Cow position: chr15:5197341-5197173 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 39

Show alignments to all cow chromosomes.