Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-213
Cow position: chr16:22124724-22124935 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 176
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 48, 121

Conread position: 1-228
Cow position: chr16:14568819-14569045 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 181
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 49, 113

Conread position: 1-228
Cow position: chr16:24974484-24974704 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 49, 139

Conread position: 1-258
Cow position: chr16:10202958-10203211 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 49, 159

Conread position: 1-278
Cow position: chr16:34533391-34533119 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 150, 43

Conread position: 1-280
Cow position: chr16:51043077-51042803 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 1-285
Cow position: chr16:7701751-7701461 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 1-293
Cow position: chr16:45683667-45683372 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 26

Conread position: 1-293
Cow position: chr16:47518285-47517994 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 75

Conread position: 1-299
Cow position: chr16:41858638-41858340 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 49, 133

Conread position: 1-312
Cow position: chr16:15805278-15804975 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 97

Conread position: 1-319
Cow position: chr16:6379663-6379977 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 159

Conread position: 1-321
Cow position: chr16:14758165-14757846 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 139

Conread position: 1-322
Cow position: chr16:19409379-19409697 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-322
Cow position: chr16:24229212-24228899 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 1-322
Cow position: chr16:46223528-46223853 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-332
Cow position: chr16:48677171-48677497 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 151

Conread position: 1-345
Cow position: chr16:55151299-55150964 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 140

Conread position: 1-347
Cow position: chr16:49169914-49170243 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-349
Cow position: chr16:44689180-44689529 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 49, 168

Conread position: 1-355
Cow position: chr16:30143990-30144329 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 89

Conread position: 1-411
Cow position: chr16:2223956-2224396 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-412
Cow position: chr16:32118553-32118131 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 124

Conread position: 1-414
Cow position: chr16:42745508-42745922 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-421
Cow position: chr16:51641223-51640792 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-433
Cow position: chr16:49577950-49577522 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 155

Conread position: 1-440
Cow position: chr16:5350532-5350984 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-441
Cow position: chr16:44676330-44675876 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-446
Cow position: chr16:23737629-23737211 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 374, 63

Conread position: 1-477
Cow position: chr16:28022094-28022570 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-478
Cow position: chr16:13421950-13422436 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 157

Conread position: 1-478
Cow position: chr16:53509544-53510038 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 170

Conread position: 1-484
Cow position: chr16:14029180-14029661 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 160

Conread position: 1-486
Cow position: chr16:50190146-50190636 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 161

Conread position: 1-487
Cow position: chr16:8813129-8813626 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-487
Cow position: chr16:39033376-39033856 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 129

Conread position: 1-488
Cow position: chr16:16096173-16095675 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 1-489
Cow position: chr16:192963-193460 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:840246-839756 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:1563411-1563913 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position: chr16:2724248-2724749 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:3148065-3148561 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 111

Conread position: 1-489
Cow position: chr16:3769032-3769536 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:4461352-4461836 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position: chr16:5435801-5435300 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:5833795-5833276 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 1-489
Cow position: chr16:7467584-7467088 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 161

Conread position: 1-489
Cow position: chr16:10441214-10440714 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 160

Conread position: 1-489
Cow position: chr16:11054943-11054466 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 137

Conread position: 1-489
Cow position: chr16:11632868-11633369 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:12160317-12160805 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 1-489
Cow position: chr16:14040401-14039901 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position: chr16:14662147-14662633 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position: chr16:15188031-15187543 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 1-489
Cow position: chr16:15495426-15494933 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 1-489
Cow position: chr16:15979402-15979903 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position: chr16:23248986-23249480 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 47

Conread position: 1-489
Cow position: chr16:23810488-23809996 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 102

Conread position: 1-489
Cow position: chr16:23986289-23985788 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 160

Conread position: 1-489
Cow position: chr16:24240424-24240925 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:25043023-25042527 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 156

Conread position: 1-489
Cow position: chr16:25344951-25344453 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 102

Conread position: 1-489
Cow position: chr16:25444852-25444352 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 1-489
Cow position: chr16:26666686-26666179 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 266

Conread position: 1-489
Cow position: chr16:27013366-27012877 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 1-489
Cow position: chr16:28206135-28206636 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:28468147-28468648 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:43894287-43894787 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 1-489
Cow position: chr16:45534429-45533937 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 1-489
Cow position: chr16:45654594-45655117 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 164

Conread position: 1-489
Cow position: chr16:46101643-46102142 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 161

Conread position: 1-489
Cow position: chr16:47017792-47018274 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 112

Conread position: 1-489
Cow position: chr16:48411620-48411110 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 168

Conread position: 1-489
Cow position: chr16:52527204-52526708 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 37

Conread position: 1-489
Cow position: chr16:54322434-54322943 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position: chr16:56913265-56913759 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 2-432
Cow position: chr16:15369966-15369529 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 4-291
Cow position: chr16:7673404-7673692 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 46, 157

Conread position: 4-322
Cow position: chr16:18205204-18204886 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 128

Conread position: 4-356
Cow position: chr16:48494946-48495310 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 4-487
Cow position: chr16:7457014-7457505 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 60

Conread position: 4-489
Cow position: chr16:2232754-2233251 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 4-489
Cow position: chr16:25157435-25157919 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 155

Conread position: 4-489
Cow position: chr16:26500603-26500138 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 4-489
Cow position: chr16:41163805-41164296 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 34

Conread position: 5-322
Cow position: chr16:11007696-11007363 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 166

Conread position: 5-327
Cow position: chr16:22810602-22810917 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 44, 120

Conread position: 5-424
Cow position: chr16:48341236-48341667 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 5-460
Cow position: chr16:9786289-9785812 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 157

Conread position: 5-489
Cow position: chr16:21018530-21018034 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 5-489
Cow position: chr16:29158572-29158097 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 155

Conread position: 6-487
Cow position: chr16:31426025-31425527 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 80

Conread position: 7-447
Cow position: chr16:27817973-27818418 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 300
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 67

Conread position: 7-449
Cow position: chr16:23563403-23562969 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 17

Conread position: 8-241
Cow position: chr16:46254284-46254519 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 85

Conread position: 8-467
Cow position: chr16:47367938-47367487 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 39, 105

Conread position: 8-489
Cow position: chr16:13601653-13602162 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 347
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 92

Conread position: 9-287
Cow position: chr16:17665087-17664802 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 216
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 28, 152

Conread position: 9-313
Cow position: chr16:56149746-56149447 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 10

Conread position: 9-321
Cow position: chr16:54297918-54297626 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 121, 55

Conread position: 9-322
Cow position: chr16:6389688-6389998 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-322
Cow position: chr16:44972776-44973089 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 26

Conread position: 9-486
Cow position: chr16:340704-340260 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 9-487
Cow position: chr16:3332857-3332384 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-487
Cow position: chr16:20634276-20634740 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 141

Conread position: 9-489
Cow position: chr16:8481646-8482145 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 151

Conread position: 9-489
Cow position: chr16:44256153-44256650 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 277

Conread position: 10-467
Cow position: chr16:43851392-43851842 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 307
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 28

Conread position: 10-489
Cow position: chr16:51087749-51087259 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 149

Conread position: 11-476
Cow position: chr16:49515815-49516296 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 149

Conread position: 13-489
Cow position: chr16:43562431-43562920 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 15-489
Cow position: chr16:37670547-37671022 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 145

Conread position: 15-489
Cow position: chr16:53225372-53225845 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 150

Conread position: 19-489
Cow position: chr16:44089-43637 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 23-489
Cow position: chr16:2305314-2304835 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 77

Conread position: 24-489
Cow position: chr16:49742576-49743048 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 136

Conread position: 31-481
Cow position: chr16:7136904-7137358 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 31-487
Cow position: chr16:600366-599902 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 129

Conread position: 46-414
Cow position: chr16:5844841-5844457 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 109

Conread position: 49-318
Cow position: chr16:31001648-31001395 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 100

Conread position: 49-489
Cow position: chr16:25169148-25168712 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 77

Conread position: 51-489
Cow position: chr16:55682430-55681988 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 104

Conread position: 57-489
Cow position: chr16:37058086-37058534 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 98

Conread position: 59-489
Cow position: chr16:28267805-28268240 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 54

Conread position: 61-488
Cow position: chr16:20434488-20434069 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 94

Conread position: 64-487
Cow position: chr16:43770250-43770674 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 71-431
Cow position: chr16:7541378-7541019 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 13

Conread position: 83-489
Cow position: chr16:4972637-4973050 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 72

Conread position: 84-489
Cow position: chr16:14351797-14352206 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 70

Conread position: 84-489
Cow position: chr16:34833303-34833687 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 263
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 314, 64

Conread position: 93-440
Cow position: chr16:8871564-8871915 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 60

Conread position: 101-487
Cow position: chr16:12737150-12736757 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 52

Conread position: 104-322
Cow position: chr16:16237111-16237323 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 85, 49

Conread position: 105-489
Cow position: chr16:41576107-41575729 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 50

Conread position: 107-488
Cow position: chr16:23065862-23065479 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 216, 44

Conread position: 114-489
Cow position: chr16:55591133-55591505 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 266
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 39

Conread position: 115-489
Cow position: chr16:45560157-45559781 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 119-487
Cow position: chr16:25964750-25964388 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 34

Conread position: 120-489
Cow position: chr16:44049074-44049448 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 33

Conread position: 123-389
Cow position: chr16:39457234-39456965 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 30

Conread position: 132-484
Cow position: chr16:41804612-41804966 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 21

Conread position: 155-489
Cow position: chr16:7673641-7673986 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 219
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 140, 72

Conread position: 157-489
Cow position: chr16:7155415-7155078 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 12

Conread position: 157-489
Cow position: chr16:41515950-41515607 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 16

Conread position: 158-489
Cow position: chr16:32326678-32326339 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 159-472
Cow position: chr16:4367441-4367117 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 14, 115

Conread position: 179-489
Cow position: chr16:41623893-41624205 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 180-489
Cow position: chr16:10859528-10859852 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 17

Conread position: 180-489
Cow position: chr16:36247266-36246948 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 114, 86

Conread position: 182-489
Cow position: chr16:37454692-37455006 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 61

Conread position: 183-475
Cow position: chr16:55868115-55867817 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 211
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 88

Conread position: 183-489
Cow position: chr16:49219159-49219474 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 87

Conread position: 184-484
Cow position: chr16:37925191-37925505 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 83

Conread position: 184-487
Cow position: chr16:20204791-20204481 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 184-489
Cow position: chr16:45704005-45704319 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 57

Conread position: 185-368
Cow position: chr16:39645776-39645594 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 158, 81

Conread position: 185-397
Cow position: chr16:13790828-13790617 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 109, 90

Conread position: 186-484
Cow position: chr16:52856055-52856355 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 91, 54

Conread position: 193-489
Cow position: chr16:23711503-23711812 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 40

Conread position: 204-486
Cow position: chr16:12244271-12244563 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 8, 30

Conread position: 206-447
Cow position: chr16:54703267-54703014 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 64

Conread position: 207-471
Cow position: chr16:29093891-29093614 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 63

Conread position: 240-471
Cow position: chr16:15409348-15409596 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 34

Conread position: 249-474
Cow position: chr16:54287269-54287027 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 21

Conread position: 251-477
Cow position: chr16:20201799-20201558 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 19

Conread position: 314-484
Cow position: chr16:14569547-14569717 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 43

Conread position: 314-489
Cow position: chr16:37486606-37486782 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 45

Conread position: 322-469
Cow position: chr16:24702448-24702593 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 35

Conread position: 322-489
Cow position: chr16:6264335-6264502 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 35

Conread position: 322-489
Cow position: chr16:39475470-39475305 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 36

Conread position: 329-489
Cow position: chr16:20643123-20642964 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 30

Conread position: 329-489
Cow position: chr16:49511166-49511325 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 62, 30

Conread position: 332-489
Cow position: chr16:53991587-53991429 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 84, 27

Show alignments to all cow chromosomes.