Cow genome map
| Conread name: | rpigca0_001979.y1 |
| Conread position: | 1-219 |
| Cow position: | chr21:23606179-23605954 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 1-225 |
| Cow position: | chr21:27146697-27146920 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 1-225 |
| Cow position: | chr21:28734691-28734915 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-228 |
| Cow position: | chr21:7666548-7666782 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-228 |
| Cow position: | chr21:43240344-43240104 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 173 |
| Conread position: | 1-243 |
| Cow position: | chr21:9711209-9711443 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 1-268 |
| Cow position: | chr21:13315299-13315038 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-299 |
| Cow position: | chr21:24606915-24606624 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 1-302 |
| Cow position: | chr21:10668505-10668788 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-302 |
| Cow position: | chr21:12075894-12076193 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 1-303 |
| Cow position: | chr21:27864012-27864319 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 105 |
| Conread position: | 1-316 |
| Cow position: | chr21:33350211-33349900 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 161 |
| Conread position: | 1-320 |
| Cow position: | chr21:28810746-28811065 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 1-322 |
| Cow position: | chr21:9201695-9201374 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1-322 |
| Cow position: | chr21:26829729-26830043 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 1-322 |
| Cow position: | chr21:28028470-28028150 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-322 |
| Cow position: | chr21:28210694-28210384 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 82 |
| Conread position: | 1-322 |
| Cow position: | chr21:39700597-39700913 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 159 |
| Conread position: | 1-347 |
| Cow position: | chr21:3253466-3253131 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 1-357 |
| Cow position: | chr21:18979347-18979696 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 282, 48 |
| Conread position: | 1-365 |
| Cow position: | chr21:19974262-19973900 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 1-370 |
| Cow position: | chr21:38900284-38899917 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 160 |
| Conread position: | 1-378 |
| Cow position: | chr21:13111289-13111663 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 133 |
| Conread position: | 1-382 |
| Cow position: | chr21:44761844-44762235 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 1-409 |
| Cow position: | chr21:42558612-42558191 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 1-412 |
| Cow position: | chr21:26628605-26628182 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-413 |
| Cow position: | chr21:28989121-28988705 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 1-432 |
| Cow position: | chr21:48196277-48195847 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 1-451 |
| Cow position: | chr21:44861754-44862216 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 178 |
| Conread position: | 1-452 |
| Cow position: | chr21:9010267-9010734 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-475 |
| Cow position: | chr21:4098398-4097926 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 75 |
| Conread position: | 1-480 |
| Cow position: | chr21:28477133-28476648 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-484 |
| Cow position: | chr21:33728944-33728450 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 136 |
| Conread position: | 1-485 |
| Cow position: | chr21:15545853-15546347 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-487 |
| Cow position: | chr21:43541-43055 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 161 |
| Conread position: | 1-487 |
| Cow position: | chr21:13303033-13302545 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-487 |
| Cow position: | chr21:18285639-18285145 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 1-487 |
| Cow position: | chr21:34254771-34255239 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 70 |
| Conread position: | 1-489 |
| Cow position: | chr21:1196375-1195875 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:1765698-1766182 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 162 |
| Conread position: | 1-489 |
| Cow position: | chr21:2514685-2514188 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 1-489 |
| Cow position: | chr21:2878004-2878500 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 1-489 |
| Cow position: | chr21:2904955-2905452 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:3782610-3782110 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:4585838-4586341 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 161 |
| Conread position: | 1-489 |
| Cow position: | chr21:4898135-4898627 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 1-489 |
| Cow position: | chr21:5020976-5020483 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:6765181-6765688 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:8071261-8071760 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 1-489 |
| Cow position: | chr21:12153650-12153160 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 1-489 |
| Cow position: | chr21:12802275-12802762 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 103 |
| Conread position: | 1-489 |
| Cow position: | chr21:13300652-13300166 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 1-489 |
| Cow position: | chr21:16278235-16277738 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 72 |
| Conread position: | 1-489 |
| Cow position: | chr21:16890006-16890505 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 162 |
| Conread position: | 1-489 |
| Cow position: | chr21:18850893-18851372 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 31 |
| Conread position: | 1-489 |
| Cow position: | chr21:21027293-21026811 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 117 |
| Conread position: | 1-489 |
| Cow position: | chr21:21919325-21918828 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 86 |
| Conread position: | 1-489 |
| Cow position: | chr21:24697985-24697510 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 13 |
| Conread position: | 1-489 |
| Cow position: | chr21:25157122-25156637 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 1-489 |
| Cow position: | chr21:26399948-26400427 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 63 |
| Conread position: | 1-489 |
| Cow position: | chr21:27065762-27066262 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 1-489 |
| Cow position: | chr21:30595253-30595753 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:31252836-31252327 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:33257392-33256893 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 1-489 |
| Cow position: | chr21:33316528-33317029 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr21:33832139-33832642 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 1-489 |
| Cow position: | chr21:33964894-33965382 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 111 |
| Conread position: | 1-489 |
| Cow position: | chr21:36534376-36534871 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 1-489 |
| Cow position: | chr21:38450174-38450644 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 114 |
| Conread position: | 1-489 |
| Cow position: | chr21:47429178-47428680 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 157 |
| Conread position: | 1-489 |
| Cow position: | chr21:48262647-48262153 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 2-487 |
| Cow position: | chr21:20910596-20911086 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 4-322 |
| Cow position: | chr21:743876-744175 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 4-322 |
| Cow position: | chr21:20262831-20263156 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 156 |
| Conread position: | 4-437 |
| Cow position: | chr21:1058306-1057851 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 4-489 |
| Cow position: | chr21:29423893-29423400 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 63 |
| Conread position: | 4-489 |
| Cow position: | chr21:29500370-29499875 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 4-489 |
| Cow position: | chr21:31512437-31512933 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 102 |
| Conread position: | 4-489 |
| Cow position: | chr21:34684858-34684386 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 5-275 |
| Cow position: | chr21:29214651-29214919 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 5-317 |
| Cow position: | chr21:20588535-20588231 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 151 |
| Conread position: | 5-474 |
| Cow position: | chr21:13704179-13704658 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 5-489 |
| Cow position: | chr21:28915143-28915638 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 7-273 |
| Cow position: | chr21:42542880-42543150 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 148 |
| Conread position: | 8-322 |
| Cow position: | chr21:32814313-32814618 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 8-484 |
| Cow position: | chr21:7156205-7155730 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 129 |
| Conread position: | 8-489 |
| Cow position: | chr21:5596608-5596139 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 311 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 316, 56 |
| Conread position: | 8-489 |
| Cow position: | chr21:45781906-45782388 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 9-263 |
| Cow position: | chr21:16270184-16270431 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 9-291 |
| Cow position: | chr21:29015640-29015917 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 151 |
| Conread position: | 9-327 |
| Cow position: | chr21:5595166-5594851 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 151 |
| Conread position: | 9-357 |
| Cow position: | chr21:8419950-8419603 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 9-480 |
| Cow position: | chr21:36163459-36163943 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 119 |
| Conread position: | 9-487 |
| Cow position: | chr21:2768005-2768504 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 154 |
| Conread position: | 9-487 |
| Cow position: | chr21:30627259-30627740 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 9-489 |
| Cow position: | chr21:4192122-4191632 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 330 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 47 |
| Conread position: | 9-489 |
| Cow position: | chr21:6623650-6623151 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 105 |
| Conread position: | 9-489 |
| Cow position: | chr21:21216637-21217113 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 9-489 |
| Cow position: | chr21:44804753-44805227 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 29 |
| Conread position: | 9-489 |
| Cow position: | chr21:48291528-48292014 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 150 |
| Conread position: | 9-489 |
| Cow position: | chr21:48531001-48530505 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 151 |
| Conread position: | 10-273 |
| Cow position: | chr21:33947577-33947836 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 150 |
| Conread position: | 10-328 |
| Cow position: | chr21:13763056-13762745 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 10-489 |
| Cow position: | chr21:81573-81084 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 150 |
| Conread position: | 10-489 |
| Cow position: | chr21:19965425-19964946 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 331 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 76, 7 |
| Conread position: | 11-489 |
| Cow position: | chr21:17474542-17474055 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 6 |
| Conread position: | 13-432 |
| Cow position: | chr21:48234493-48234921 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 23-424 |
| Cow position: | chr21:16768307-16768711 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 23-489 |
| Cow position: | chr21:33983457-33983938 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 24-322 |
| Cow position: | chr21:8890711-8890401 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 26, 257 |
| Conread position: | 24-451 |
| Cow position: | chr21:18786700-18787134 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 46-353 |
| Cow position: | chr21:21411816-21412116 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 40, 84 |
| Conread position: | 49-302 |
| Cow position: | chr21:16532909-16532658 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 49-342 |
| Cow position: | chr21:26241024-26240750 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 261, 32 |
| Conread position: | 49-488 |
| Cow position: | chr21:49655400-49655845 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 49-489 |
| Cow position: | chr21:27342627-27343061 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 49-489 |
| Cow position: | chr21:42460289-42460720 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 51-489 |
| Cow position: | chr21:20243820-20244263 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 54-489 |
| Cow position: | chr21:33307748-33307303 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 101 |
| Conread position: | 55-484 |
| Cow position: | chr21:46973966-46974388 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 65-489 |
| Cow position: | chr21:4722413-4721994 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 7, 20 |
| Conread position: | 65-489 |
| Cow position: | chr21:23548496-23548922 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 72-421 |
| Cow position: | chr21:2928113-2928469 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 72-487 |
| Cow position: | chr21:13749921-13749499 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 72-489 |
| Cow position: | chr21:17721340-17720920 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 293 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 72-489 |
| Cow position: | chr21:23500913-23501338 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 84-259 |
| Cow position: | chr21:3629049-3629216 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 84-489 |
| Cow position: | chr21:31276085-31275681 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 9 |
| Conread position: | 85-489 |
| Cow position: | chr21:22316262-22315868 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 240, 14 |
| Conread position: | 99-489 |
| Cow position: | chr21:17144421-17144025 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 54 |
| Conread position: | 105-489 |
| Cow position: | chr21:47360447-47360832 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 43 |
| Conread position: | 107-489 |
| Cow position: | chr21:47532458-47532070 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 46 |
| Conread position: | 112-320 |
| Cow position: | chr21:28442171-28441965 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 72, 41 |
| Conread position: | 118-484 |
| Cow position: | chr21:39400958-39400577 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 159 |
| Conread position: | 118-489 |
| Cow position: | chr21:26698965-26699328 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 119-365 |
| Cow position: | chr21:18829169-18829405 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 122-489 |
| Cow position: | chr21:4739347-4738976 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 139-489 |
| Cow position: | chr21:18824002-18824333 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 202, 14 |
| Conread position: | 154-489 |
| Cow position: | chr21:9896038-9895699 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 26 |
| Conread position: | 155-489 |
| Cow position: | chr21:4189222-4188874 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 160-484 |
| Cow position: | chr21:27263356-27263033 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 120, 15 |
| Conread position: | 165-489 |
| Cow position: | chr21:34657661-34657331 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 178-489 |
| Cow position: | chr21:28881329-28881009 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 145, 93 |
| Conread position: | 185-489 |
| Cow position: | chr21:18791781-18792102 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 212-484 |
| Cow position: | chr21:32573608-32573321 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 237-489 |
| Cow position: | chr21:33420374-33420631 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 314-489 |
| Cow position: | chr21:3804269-3804443 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 69, 44 |
Show alignments to all cow chromosomes.