Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-242
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 14, 184

Conread position: 1-256
Cow position:
Alignm length: 266
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 49, 85

Conread position: 1-275
Cow position:
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 8

Conread position: 1-292
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 159

Conread position: 1-292
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 167

Conread position: 1-307
Cow position:
Alignm length: 314
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 34

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-322
Cow position:
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 166

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-325
Cow position:
Alignm length: 332
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-356
Cow position:
Alignm length: 359
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 63

Conread position: 1-366
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 13

Conread position: 1-394
Cow position:
Alignm length: 406
Alignm identity: 276
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 52, 133

Conread position: 1-433
Cow position:
Alignm length: 459
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-467
Cow position:
Alignm length: 493
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 174

Conread position: 1-484
Cow position:
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 1-488
Cow position:
Alignm length: 508
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 86

Conread position: 1-489
Cow position:
Alignm length: 499
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 133

Conread position: 1-489
Cow position:
Alignm length: 505
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 278

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 521
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position:
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position:
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 154

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 168

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 155

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 4-304
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 4-481
Cow position:
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 17

Conread position: 4-487
Cow position:
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 46

Conread position: 5-407
Cow position:
Alignm length: 428
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 6-270
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 43, 105

Conread position: 8-299
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 23

Conread position: 8-303
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 78, 40

Conread position: 8-317
Cow position:
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 42, 104

Conread position: 8-320
Cow position:
Alignm length: 316
Alignm identity: 220
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 148

Conread position: 8-489
Cow position:
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 154

Conread position: 8-489
Cow position:
Alignm length: 505
Alignm identity: 330
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 152

Conread position: 9-430
Cow position:
Alignm length: 430
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position:
Alignm length: 493
Alignm identity: 329
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 60

Conread position: 9-489
Cow position:
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 152

Conread position: 9-489
Cow position:
Alignm length: 503
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 152

Conread position: 9-489
Cow position:
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 117

Conread position: 10-302
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 96

Conread position: 10-339
Cow position:
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 39, 246

Conread position: 11-322
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 11-483
Cow position:
Alignm length: 487
Alignm identity: 317
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 124

Conread position: 49-322
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 108

Conread position: 49-467
Cow position:
Alignm length: 438
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 105

Conread position: 49-489
Cow position:
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 68

Conread position: 66-489
Cow position:
Alignm length: 441
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 89

Conread position: 72-343
Cow position:
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 83

Conread position: 72-487
Cow position:
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 72-489
Cow position:
Alignm length: 436
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 82

Conread position: 72-489
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 29

Conread position: 103-486
Cow position:
Alignm length: 403
Alignm identity: 273
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 190, 49

Conread position: 105-487
Cow position:
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 16

Conread position: 180-322
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 180-489
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 115, 86

Conread position: 182-473
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 39

Conread position: 188-489
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 198-489
Cow position:
Alignm length: 300
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 96, 72

Conread position: 216-489
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 14, 59

Conread position: 246-487
Cow position:
Alignm length: 256
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 24

Conread position: 259-486
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 103

Conread position: 276-489
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 34

Conread position: 324-488
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 66, 35

Show alignments to all cow chromosomes.