Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-238
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 68

Conread position: 1-262
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-292
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 134

Conread position: 1-306
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 1-320
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 8

Conread position: 1-322
Cow position:
Alignm length: 333
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 8

Conread position: 1-354
Cow position:
Alignm length: 356
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 52

Conread position: 1-409
Cow position:
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 44

Conread position: 1-412
Cow position:
Alignm length: 437
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 150

Conread position: 1-449
Cow position:
Alignm length: 458
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 1-450
Cow position:
Alignm length: 459
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 161

Conread position: 1-463
Cow position:
Alignm length: 484
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 1-466
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-479
Cow position:
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 277

Conread position: 1-486
Cow position:
Alignm length: 509
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-487
Cow position:
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 14

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 267

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 1-489
Cow position:
Alignm length: 503
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 505
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 1-489
Cow position:
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 107

Conread position: 1-489
Cow position:
Alignm length: 507
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 513
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 63

Conread position: 1-489
Cow position:
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 8

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 1-489
Cow position:
Alignm length: 519
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position:
Alignm length: 506
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 154

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 4-365
Cow position:
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 157

Conread position: 4-489
Cow position:
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 4-489
Cow position:
Alignm length: 508
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 5-489
Cow position:
Alignm length: 510
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 6-428
Cow position:
Alignm length: 439
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 150

Conread position: 7-489
Cow position:
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 57

Conread position: 8-320
Cow position:
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 151

Conread position: 8-489
Cow position:
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 143

Conread position: 9-320
Cow position:
Alignm length: 312
Alignm identity: 205
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 9-484
Cow position:
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 151

Conread position: 9-487
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position:
Alignm length: 508
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 11-481
Cow position:
Alignm length: 486
Alignm identity: 310
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 72

Conread position: 14-488
Cow position:
Alignm length: 507
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 113

Conread position: 16-484
Cow position:
Alignm length: 492
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 154

Conread position: 21-484
Cow position:
Alignm length: 485
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 134

Conread position: 38-489
Cow position:
Alignm length: 462
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 11

Conread position: 49-295
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 44, 105

Conread position: 49-483
Cow position:
Alignm length: 451
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 37, 106

Conread position: 51-489
Cow position:
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 65

Conread position: 52-489
Cow position:
Alignm length: 456
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 71

Conread position: 53-489
Cow position:
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 72

Conread position: 56-247
Cow position:
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 100

Conread position: 59-485
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 96

Conread position: 62-243
Cow position:
Alignm length: 184
Alignm identity: 144
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 24, 93

Conread position: 63-489
Cow position:
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 92

Conread position: 74-437
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 84-293
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 0

Conread position: 84-489
Cow position:
Alignm length: 422
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 68

Conread position: 155-489
Cow position:
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 179-488
Cow position:
Alignm length: 324
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 91

Conread position: 192-484
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 80

Conread position: 196-475
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 78

Conread position: 233-489
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 67, 37

Conread position: 251-479
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 52, 19

Conread position: 314-477
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 60, 43

Conread position: 320-489
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 20

Conread position: 321-489
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 43

Show alignments to all cow chromosomes.