Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-255
Cow position:
Alignm length: 263
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-285
Cow position:
Alignm length: 292
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-287
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 128

Conread position: 1-305
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-308
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 1-319
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 105

Conread position: 1-321
Cow position:
Alignm length: 325
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 153

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 1-322
Cow position:
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 1-322
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 16, 93

Conread position: 1-322
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 81

Conread position: 1-326
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 19

Conread position: 1-326
Cow position:
Alignm length: 330
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 14

Conread position: 1-327
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 157

Conread position: 1-365
Cow position:
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 21

Conread position: 1-413
Cow position:
Alignm length: 441
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 165

Conread position: 1-452
Cow position:
Alignm length: 462
Alignm identity: 323
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 78, 63

Conread position: 1-464
Cow position:
Alignm length: 488
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 162

Conread position: 1-465
Cow position:
Alignm length: 488
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 134

Conread position: 1-473
Cow position:
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 88

Conread position: 1-484
Cow position:
Alignm length: 504
Alignm identity: 342
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 41, 119

Conread position: 1-484
Cow position:
Alignm length: 508
Alignm identity: 343
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 14

Conread position: 1-485
Cow position:
Alignm length: 507
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 160

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 122

Conread position: 1-489
Cow position:
Alignm length: 504
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 97

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 1-489
Cow position:
Alignm length: 513
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 159

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 158

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 163

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 113

Conread position: 1-489
Cow position:
Alignm length: 504
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 490
Alignm identity: 321
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 78, 62

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 169

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 157

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 123

Conread position: 1-489
Cow position:
Alignm length: 504
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 152

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position:
Alignm length: 506
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 47

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 160

Conread position: 1-489
Cow position:
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 154

Conread position: 2-474
Cow position:
Alignm length: 496
Alignm identity: 328
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 44, 20

Conread position: 4-228
Cow position:
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 4-319
Cow position:
Alignm length: 323
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 4-322
Cow position:
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 31

Conread position: 4-322
Cow position:
Alignm length: 325
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 4-408
Cow position:
Alignm length: 414
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 4-450
Cow position:
Alignm length: 457
Alignm identity: 301
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 40, 157

Conread position: 4-489
Cow position:
Alignm length: 504
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 121

Conread position: 4-489
Cow position:
Alignm length: 508
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 156

Conread position: 4-489
Cow position:
Alignm length: 507
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 5-322
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 5-483
Cow position:
Alignm length: 499
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 39

Conread position: 5-486
Cow position:
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 5-489
Cow position:
Alignm length: 509
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 156

Conread position: 6-356
Cow position:
Alignm length: 376
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 159

Conread position: 8-302
Cow position:
Alignm length: 304
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 151

Conread position: 8-308
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 152

Conread position: 8-322
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 13

Conread position: 8-474
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 100

Conread position: 8-484
Cow position:
Alignm length: 499
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 150

Conread position: 8-489
Cow position:
Alignm length: 503
Alignm identity: 328
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 43, 151

Conread position: 8-489
Cow position:
Alignm length: 511
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 8-489
Cow position:
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 74

Conread position: 9-487
Cow position:
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 124

Conread position: 9-487
Cow position:
Alignm length: 501
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 125

Conread position: 9-489
Cow position:
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position:
Alignm length: 507
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position:
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 116

Conread position: 9-489
Cow position:
Alignm length: 503
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 151

Conread position: 9-489
Cow position:
Alignm length: 504
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 151

Conread position: 10-431
Cow position:
Alignm length: 440
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 75

Conread position: 10-489
Cow position:
Alignm length: 504
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 150

Conread position: 10-489
Cow position:
Alignm length: 496
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 149

Conread position: 17-238
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 33, 62

Conread position: 20-487
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 142

Conread position: 24-322
Cow position:
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 135

Conread position: 24-364
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 24-489
Cow position:
Alignm length: 488
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 136

Conread position: 24-489
Cow position:
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 28-489
Cow position:
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 46-488
Cow position:
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 58

Conread position: 49-264
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 37, 106

Conread position: 49-305
Cow position:
Alignm length: 260
Alignm identity: 195
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 79

Conread position: 56-487
Cow position:
Alignm length: 445
Alignm identity: 293
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 67

Conread position: 64-463
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 66-489
Cow position:
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 72-377
Cow position:
Alignm length: 324
Alignm identity: 233
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 83

Conread position: 72-475
Cow position:
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 66

Conread position: 72-484
Cow position:
Alignm length: 432
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 85

Conread position: 83-489
Cow position:
Alignm length: 408
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 70

Conread position: 84-465
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 244, 50

Conread position: 85-489
Cow position:
Alignm length: 420
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 19

Conread position: 86-489
Cow position:
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 67

Conread position: 99-489
Cow position:
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 54

Conread position: 108-374
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 188, 35

Conread position: 111-322
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 179-489
Cow position:
Alignm length: 330
Alignm identity: 233
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 95, 190

Conread position: 181-486
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 119, 90

Conread position: 184-489
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 64

Conread position: 190-489
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 84

Conread position: 197-489
Cow position:
Alignm length: 304
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 73

Conread position: 200-468
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 123, 66

Conread position: 207-489
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 64

Conread position: 314-461
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 45

Conread position: 314-489
Cow position:
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 76, 43

Conread position: 314-489
Cow position:
Alignm length: 177
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 43

Conread position: 320-489
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 13

Conread position: 322-489
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 34

Conread position: 322-489
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 64, 35

Conread position: 322-489
Cow position:
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 35

Show alignments to all cow chromosomes.