Cow genome map

Conread name: rpigca0_001979.y1

Conread position: 1-227
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 48, 136

Conread position: 1-241
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 49, 62

Conread position: 1-243
Cow position:
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-322
Cow position:
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 156

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-322
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 160

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-322
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 24

Conread position: 1-322
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 81

Conread position: 1-351
Cow position:
Alignm length: 359
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-355
Cow position:
Alignm length: 379
Alignm identity: 265
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 49, 162

Conread position: 1-403
Cow position:
Alignm length: 422
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 132

Conread position: 1-413
Cow position:
Alignm length: 433
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 39

Conread position: 1-436
Cow position:
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 1-444
Cow position:
Alignm length: 472
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 165

Conread position: 1-455
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-461
Cow position:
Alignm length: 483
Alignm identity: 308
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 47, 159

Conread position: 1-464
Cow position:
Alignm length: 493
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 110

Conread position: 1-467
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 1-475
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 55, 16

Conread position: 1-484
Cow position:
Alignm length: 505
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-487
Cow position:
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 167

Conread position: 1-487
Cow position:
Alignm length: 508
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 1-489
Cow position:
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 161

Conread position: 1-489
Cow position:
Alignm length: 507
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 105

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 1-489
Cow position:
Alignm length: 519
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 42

Conread position: 1-489
Cow position:
Alignm length: 504
Alignm identity: 341
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 293, 34

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 149

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 159

Conread position: 1-489
Cow position:
Alignm length: 513
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 508
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 1-489
Cow position:
Alignm length: 497
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 154

Conread position: 1-489
Cow position:
Alignm length: 512
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 520
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 136

Conread position: 1-489
Cow position:
Alignm length: 517
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 519
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 77

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 1-489
Cow position:
Alignm length: 510
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 159

Conread position: 1-489
Cow position:
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 160

Conread position: 1-489
Cow position:
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 64

Conread position: 1-489
Cow position:
Alignm length: 515
Alignm identity: 343
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 13

Conread position: 1-489
Cow position:
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 1-489
Cow position:
Alignm length: 509
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 3-322
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 47, 103

Conread position: 4-247
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 36, 138

Conread position: 4-489
Cow position:
Alignm length: 522
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 5-308
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 25

Conread position: 5-399
Cow position:
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 155

Conread position: 5-489
Cow position:
Alignm length: 502
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 135

Conread position: 6-322
Cow position:
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 154

Conread position: 6-489
Cow position:
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 26

Conread position: 6-489
Cow position:
Alignm length: 503
Alignm identity: 334
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 11

Conread position: 8-282
Cow position:
Alignm length: 292
Alignm identity: 211
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 39, 152

Conread position: 8-457
Cow position:
Alignm length: 464
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 153

Conread position: 8-487
Cow position:
Alignm length: 509
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 15

Conread position: 8-488
Cow position:
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 65

Conread position: 8-489
Cow position:
Alignm length: 508
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 83

Conread position: 9-239
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 41, 159

Conread position: 9-293
Cow position:
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 153

Conread position: 9-396
Cow position:
Alignm length: 406
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 125

Conread position: 9-487
Cow position:
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 9-489
Cow position:
Alignm length: 503
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 149

Conread position: 9-489
Cow position:
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 10-489
Cow position:
Alignm length: 504
Alignm identity: 335
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 108

Conread position: 12-361
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 114

Conread position: 12-489
Cow position:
Alignm length: 496
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 108

Conread position: 12-489
Cow position:
Alignm length: 500
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 148

Conread position: 23-348
Cow position:
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 142

Conread position: 30-322
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 97

Conread position: 46-489
Cow position:
Alignm length: 456
Alignm identity: 298
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 70

Conread position: 49-299
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 106

Conread position: 49-312
Cow position:
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 124

Conread position: 49-466
Cow position:
Alignm length: 430
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 98

Conread position: 65-250
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 91

Conread position: 66-489
Cow position:
Alignm length: 441
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 89

Conread position: 72-475
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 63

Conread position: 72-489
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 83

Conread position: 84-488
Cow position:
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 69

Conread position: 87-464
Cow position:
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 66

Conread position: 112-344
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 158

Conread position: 112-489
Cow position:
Alignm length: 381
Alignm identity: 252
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 304, 41

Conread position: 115-324
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 119-489
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 34

Conread position: 122-489
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 125-487
Cow position:
Alignm length: 378
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 30

Conread position: 155-489
Cow position:
Alignm length: 339
Alignm identity: 218
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 179, 19

Conread position: 155-489
Cow position:
Alignm length: 343
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 41

Conread position: 161-487
Cow position:
Alignm length: 344
Alignm identity: 249
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 95, 16

Conread position: 164-483
Cow position:
Alignm length: 328
Alignm identity: 215
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 173, 108

Conread position: 181-489
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 112, 89

Conread position: 184-460
Cow position:
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 90

Conread position: 185-489
Cow position:
Alignm length: 308
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 18

Conread position: 188-488
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 78

Conread position: 189-489
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 77

Conread position: 196-474
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 127, 94

Conread position: 314-482
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 77, 0

Conread position: 321-487
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Show alignments to all cow chromosomes.