Cow genome map
| Conread name: | rpigca0_001979.y1 |
| Conread position: | 1-243 |
| Cow position: | chr6:1175305-1175534 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 84, 26 |
| Conread position: | 1-268 |
| Cow position: | chr6:24988675-24988408 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 1-277 |
| Cow position: | chr6:366700-366410 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-282 |
| Cow position: | chr6:24125772-24126049 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 90 |
| Conread position: | 1-293 |
| Cow position: | chr6:41410235-41409944 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-299 |
| Cow position: | chr6:29085878-29085578 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 46, 160 |
| Conread position: | 1-304 |
| Cow position: | chr6:47977565-47977265 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 1-306 |
| Cow position: | chr6:3445180-3445483 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 1-306 |
| Cow position: | chr6:6200963-6200661 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-319 |
| Cow position: | chr6:8535165-8535480 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 145 |
| Conread position: | 1-320 |
| Cow position: | chr6:56842656-56842339 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 44 |
| Conread position: | 1-322 |
| Cow position: | chr6:1887165-1887480 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 116 |
| Conread position: | 1-322 |
| Cow position: | chr6:47540008-47539695 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 1-376 |
| Cow position: | chr6:58036917-58036529 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 159 |
| Conread position: | 1-378 |
| Cow position: | chr6:62333116-62333504 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 122 |
| Conread position: | 1-379 |
| Cow position: | chr6:539769-539393 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 1-379 |
| Cow position: | chr6:43789734-43790124 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 154 |
| Conread position: | 1-413 |
| Cow position: | chr6:53461537-53461970 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 1-459 |
| Cow position: | chr6:9322626-9322166 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 27 |
| Conread position: | 1-460 |
| Cow position: | chr6:45617945-45618431 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 49, 124 |
| Conread position: | 1-473 |
| Cow position: | chr6:12352474-12351992 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 155 |
| Conread position: | 1-474 |
| Cow position: | chr6:27887556-27887062 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 1-478 |
| Cow position: | chr6:51674400-51673918 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 1-484 |
| Cow position: | chr6:3928768-3928280 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 159 |
| Conread position: | 1-484 |
| Cow position: | chr6:11721582-11722070 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 1-485 |
| Cow position: | chr6:58031405-58030914 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 92 |
| Conread position: | 1-486 |
| Cow position: | chr6:40251169-40251661 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 1-487 |
| Cow position: | chr6:10695348-10694857 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 52 |
| Conread position: | 1-487 |
| Cow position: | chr6:65909959-65909459 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-488 |
| Cow position: | chr6:11288834-11289332 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 1-488 |
| Cow position: | chr6:32420574-32420084 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:223865-224371 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 155 |
| Conread position: | 1-489 |
| Cow position: | chr6:327729-328230 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 1-489 |
| Cow position: | chr6:479180-478683 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:706629-706131 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 156 |
| Conread position: | 1-489 |
| Cow position: | chr6:4389346-4388873 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:5946141-5946642 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:6182093-6182575 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 119 |
| Conread position: | 1-489 |
| Cow position: | chr6:6471285-6471800 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 282 |
| Conread position: | 1-489 |
| Cow position: | chr6:6613925-6613449 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 164 |
| Conread position: | 1-489 |
| Cow position: | chr6:9839495-9840002 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 1-489 |
| Cow position: | chr6:15275606-15276107 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:15783355-15783846 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 154 |
| Conread position: | 1-489 |
| Cow position: | chr6:16593582-16593093 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:16625425-16624909 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:19719201-19718718 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 145 |
| Conread position: | 1-489 |
| Cow position: | chr6:20451592-20451093 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 1-489 |
| Cow position: | chr6:21832027-21832527 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 1-489 |
| Cow position: | chr6:24242920-24242422 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 126 |
| Conread position: | 1-489 |
| Cow position: | chr6:25790104-25790566 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 29 |
| Conread position: | 1-489 |
| Cow position: | chr6:33301303-33300798 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:33896022-33896507 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 1-489 |
| Cow position: | chr6:34030890-34030414 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 1-489 |
| Cow position: | chr6:34494306-34493808 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 1-489 |
| Cow position: | chr6:34503890-34504388 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 1-489 |
| Cow position: | chr6:34843057-34843580 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 291 |
| Conread position: | 1-489 |
| Cow position: | chr6:35873101-35873596 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 1-489 |
| Cow position: | chr6:36531909-36531406 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:39137125-39136636 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 133 |
| Conread position: | 1-489 |
| Cow position: | chr6:39330898-39331398 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:39998844-39999324 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 49 |
| Conread position: | 1-489 |
| Cow position: | chr6:44017194-44017695 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 161 |
| Conread position: | 1-489 |
| Cow position: | chr6:47039577-47040076 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:50114332-50113817 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 224 |
| Conread position: | 1-489 |
| Cow position: | chr6:50120299-50120793 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 144 |
| Conread position: | 1-489 |
| Cow position: | chr6:50571825-50571324 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:51150576-51150075 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 1-489 |
| Cow position: | chr6:51733715-51733215 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:52248899-52249375 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 191, 64 |
| Conread position: | 1-489 |
| Cow position: | chr6:53672976-53672469 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 163 |
| Conread position: | 1-489 |
| Cow position: | chr6:55538641-55539138 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 1-489 |
| Cow position: | chr6:55903723-55903222 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 1-489 |
| Cow position: | chr6:57521809-57521308 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 1-489 |
| Cow position: | chr6:59596889-59596376 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 162 |
| Conread position: | 4-278 |
| Cow position: | chr6:6100520-6100796 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 4-303 |
| Cow position: | chr6:40139664-40139951 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 4-321 |
| Cow position: | chr6:58914710-58915019 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 75 |
| Conread position: | 4-466 |
| Cow position: | chr6:7216416-7215951 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 4-489 |
| Cow position: | chr6:9733348-9733837 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 241 |
| Conread position: | 4-489 |
| Cow position: | chr6:35601291-35600812 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 64 |
| Conread position: | 5-299 |
| Cow position: | chr6:60456307-60456002 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 148 |
| Conread position: | 5-446 |
| Cow position: | chr6:5096204-5096630 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 28 |
| Conread position: | 5-480 |
| Cow position: | chr6:51877385-51876907 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 5-487 |
| Cow position: | chr6:29689482-29689000 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 5-489 |
| Cow position: | chr6:2186152-2186649 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 5-489 |
| Cow position: | chr6:53811197-53810723 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 8-256 |
| Cow position: | chr6:3118762-3119020 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 141 |
| Conread position: | 8-322 |
| Cow position: | chr6:49391711-49392025 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 8-360 |
| Cow position: | chr6:56377305-56377656 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 8-397 |
| Cow position: | chr6:6160208-6159832 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 276 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 42, 8 |
| Conread position: | 8-455 |
| Cow position: | chr6:54357904-54358352 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 148 |
| Conread position: | 8-487 |
| Cow position: | chr6:32427750-32427293 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 303 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 119 |
| Conread position: | 8-488 |
| Cow position: | chr6:10236809-10236330 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 124 |
| Conread position: | 8-489 |
| Cow position: | chr6:24623519-24624005 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 8-489 |
| Cow position: | chr6:33949537-33950027 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 8-489 |
| Cow position: | chr6:62961519-62961035 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 93 |
| Conread position: | 10-487 |
| Cow position: | chr6:40157911-40158381 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 10-489 |
| Cow position: | chr6:48947027-48947522 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 8 |
| Conread position: | 11-322 |
| Cow position: | chr6:2607081-2606781 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 40, 114 |
| Conread position: | 11-489 |
| Cow position: | chr6:43797274-43797768 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 12-242 |
| Cow position: | chr6:63197696-63197926 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 36, 148 |
| Conread position: | 13-320 |
| Cow position: | chr6:2582236-2581921 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 233 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 37, 107 |
| Conread position: | 14-489 |
| Cow position: | chr6:60166957-60167425 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 77 |
| Conread position: | 16-447 |
| Cow position: | chr6:1077636-1078075 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 34, 144 |
| Conread position: | 19-320 |
| Cow position: | chr6:16699749-16699455 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 140 |
| Conread position: | 21-489 |
| Cow position: | chr6:4274659-4274203 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 139 |
| Conread position: | 22-489 |
| Cow position: | chr6:41677536-41677067 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 23-411 |
| Cow position: | chr6:24583797-24584186 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 282 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 63, 108 |
| Conread position: | 23-489 |
| Cow position: | chr6:57857382-57856903 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 137 |
| Conread position: | 24-420 |
| Cow position: | chr6:50527122-50526713 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 128 |
| Conread position: | 24-489 |
| Cow position: | chr6:10681594-10681129 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 138 |
| Conread position: | 46-351 |
| Cow position: | chr6:3982486-3982181 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 49-291 |
| Cow position: | chr6:54491357-54491592 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 49-346 |
| Cow position: | chr6:7175079-7175362 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 50-382 |
| Cow position: | chr6:25408124-25408448 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 36, 72 |
| Conread position: | 56-487 |
| Cow position: | chr6:28102297-28102731 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 58-487 |
| Cow position: | chr6:8633767-8634169 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 64-322 |
| Cow position: | chr6:48872761-48873008 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 72-302 |
| Cow position: | chr6:39997527-39997751 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 72-322 |
| Cow position: | chr6:67213932-67213692 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 72-487 |
| Cow position: | chr6:56926291-56925868 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 72-489 |
| Cow position: | chr6:11638650-11639066 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 23 |
| Conread position: | 78-489 |
| Cow position: | chr6:17149629-17150041 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 21 |
| Conread position: | 84-441 |
| Cow position: | chr6:6601366-6601714 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 254, 69 |
| Conread position: | 85-293 |
| Cow position: | chr6:917597-917401 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 85-489 |
| Cow position: | chr6:60332888-60332476 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 68 |
| Conread position: | 87-489 |
| Cow position: | chr6:16766278-16766707 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 163 |
| Conread position: | 89-489 |
| Cow position: | chr6:55593609-55593203 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 64 |
| Conread position: | 94-316 |
| Cow position: | chr6:25782880-25783092 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 94-489 |
| Cow position: | chr6:32018570-32018979 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 192, 52 |
| Conread position: | 112-475 |
| Cow position: | chr6:1498717-1498345 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 43 |
| Conread position: | 112-487 |
| Cow position: | chr6:7105014-7105393 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 41 |
| Conread position: | 116-487 |
| Cow position: | chr6:1537217-1536840 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 37 |
| Conread position: | 124-489 |
| Cow position: | chr6:2618061-2618433 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 29 |
| Conread position: | 131-489 |
| Cow position: | chr6:10612322-10611960 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 270 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 190, 22 |
| Conread position: | 138-488 |
| Cow position: | chr6:4903511-4903862 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 15 |
| Conread position: | 155-446 |
| Cow position: | chr6:65941533-65941832 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 111, 15 |
| Conread position: | 161-455 |
| Cow position: | chr6:50801175-50801472 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 19 |
| Conread position: | 163-489 |
| Cow position: | chr6:52557177-52557503 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 11, 50 |
| Conread position: | 180-489 |
| Cow position: | chr6:47149512-47149837 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 195 |
| Conread position: | 182-489 |
| Cow position: | chr6:3574239-3573926 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 146, 81 |
| Conread position: | 183-489 |
| Cow position: | chr6:16703293-16703610 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 186-489 |
| Cow position: | chr6:12535163-12534854 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 63 |
| Conread position: | 190-318 |
| Cow position: | chr6:59603377-59603503 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 195-484 |
| Cow position: | chr6:17556233-17556532 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 75 |
| Conread position: | 198-489 |
| Cow position: | chr6:13314593-13314896 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 201-441 |
| Cow position: | chr6:1109442-1109188 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 65 |
| Conread position: | 201-487 |
| Cow position: | chr6:529459-529754 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 107, 69 |
| Conread position: | 206-489 |
| Cow position: | chr6:15924166-15924462 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 207-489 |
| Cow position: | chr6:6944519-6944808 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 90 |
| Conread position: | 210-489 |
| Cow position: | chr6:44098130-44097840 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 223-487 |
| Cow position: | chr6:49761875-49761605 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 234-489 |
| Cow position: | chr6:25179784-25180049 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 94, 36 |
| Conread position: | 266-489 |
| Cow position: | chr6:12099874-12099638 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 314-489 |
| Cow position: | chr6:50485476-50485651 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 321-489 |
| Cow position: | chr6:11353872-11354045 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 321-489 |
| Cow position: | chr6:18970141-18970302 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 23 |
| Conread position: | 323-489 |
| Cow position: | chr6:20350790-20350956 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 325-489 |
| Cow position: | chr6:42616392-42616230 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 369-487 |
| Cow position: | chr6:2581655-2581536 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
Show alignments to all cow chromosomes.