Cow genome map


           Conread name:
           rpigca0_001979.y1
        

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 87
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               52, 124
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 139
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-301
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               85, 47
               

               Conread position:
               1-318
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               39, 124
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 126
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 152
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 166
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 133
               

               Conread position:
               1-322
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 140
               

               Conread position:
               1-326
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 159
               

               Conread position:
               1-372
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 144
               

               Conread position:
               1-375
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 140
               

               Conread position:
               1-376
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 133
               

               Conread position:
               1-382
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               1-391
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 162
               

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-405
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-430
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               1-475
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 120
               

               Conread position:
               1-475
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 158
               

               Conread position:
               1-483
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 182
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               1-486
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 133
               

               Conread position:
               1-488
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 163
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               327, 52
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 161
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 133
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 160
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 183
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 110
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 128
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 161
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 132
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 162
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 158
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 14
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 43
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 94
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 160
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 157
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 164
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 137
               

               Conread position:
               1-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 159
               

               Conread position:
               2-482
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               3-355
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               4-269
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 159
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 156
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 149
               

               Conread position:
               4-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               4-453
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 283
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 156
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               187, 46
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 121
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 156
               

               Conread position:
               4-489
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               5-291
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 156
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 156
               

               Conread position:
               5-489
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 110
               

               Conread position:
               6-228
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               44, 154
               

               Conread position:
               8-251
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               8-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 152
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               43, 122
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               42, 150
               

               Conread position:
               8-322
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               40, 78
               

               Conread position:
               8-365
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               33, 146
               

               Conread position:
               8-431
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 24
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 152
               

               Conread position:
               9-302
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               41, 147
               

               Conread position:
               9-317
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               9-322
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               39, 147
               

               Conread position:
               9-431
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               9-460
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 104
               

               Conread position:
               9-476
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               326
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 128
               

               Conread position:
               9-483
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 144
               

               Conread position:
               9-486
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 88
               

               Conread position:
               9-487
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 45
               

               Conread position:
               9-489
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               9-489
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               10-322
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               10-396
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 150
               

               Conread position:
               10-483
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 150
               

               Conread position:
               10-489
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               10-489
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 147
               

               Conread position:
               11-322
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 62
               

               Conread position:
               11-487
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 151
               

               Conread position:
               11-489
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               12-322
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 148
               

               Conread position:
               16-348
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               16-489
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               23-303
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 104
               

               Conread position:
               24-247
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               24-489
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 137
               

               Conread position:
               24-489
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 138
               

               Conread position:
               26-321
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               217
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               36-369
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               37-301
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               46-489
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 76
               

               Conread position:
               49-440
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               49-489
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               49-489
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               50-489
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               52-489
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 69
               

               Conread position:
               52-489
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 230
               

               Conread position:
               52-489
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               54-489
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               55-321
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               55-489
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               58-270
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               64-489
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 91
               

               Conread position:
               67-489
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               71-468
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 84
               

               Conread position:
               72-489
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               72-489
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               72-489
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               72-489
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               79-405
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               215, 5
               

               Conread position:
               83-488
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 74
               

               Conread position:
               84-409
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               210, 54
               

               Conread position:
               84-489
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 21
               

               Conread position:
               87-489
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 57
               

               Conread position:
               105-489
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 51
               

               Conread position:
               107-485
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 23
               

               Conread position:
               111-488
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 51
               

               Conread position:
               112-489
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 41
               

               Conread position:
               114-489
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 25
               

               Conread position:
               119-489
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 34
               

               Conread position:
               119-489
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               120-470
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               29, 65
               

               Conread position:
               127-489
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 26
               

               Conread position:
               131-489
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 22
               

               Conread position:
               148-487
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 25
               

               Conread position:
               155-489
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               172, 66
               

               Conread position:
               176-406
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               121, 63
               

               Conread position:
               177-322
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               177-489
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               61, 93
               

               Conread position:
               178-485
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               117, 43
               

               Conread position:
               178-489
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               45, 72
               

               Conread position:
               178-489
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               115, 88
               

               Conread position:
               181-489
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               193, 16
               

               Conread position:
               183-397
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               141, 60
               

               Conread position:
               184-489
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               49, 14
               

               Conread position:
               187-489
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               9, 84
               

               Conread position:
               188-489
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               146, 78
               

               Conread position:
               190-489
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 59
               

               Conread position:
               206-489
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               314-487
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               151, 45
               

               Conread position:
               314-489
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               314-489
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               314-489
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               321-489
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               69, 36
               

               Conread position:
               321-489
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 36
               

               Conread position:
               321-489
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               327-489
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 32
               

               Conread position:
               364-489
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               364-489
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               107, 52
               
Show alignments to all cow chromosomes.