Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 2-217
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 58

Conread position: 3-141
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-143
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 26

Conread position: 3-144
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 3-145
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 26

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 3-156
Cow position:
Alignm length: 158
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 140, 26

Conread position: 3-161
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-175
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-180
Cow position:
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-181
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-181
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 140, 26

Conread position: 3-182
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 55

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 140, 31

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 25

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 3-182
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 27

Conread position: 3-182
Cow position:
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 143, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 194
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 111, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 140, 27

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-188
Cow position:
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 3-192
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 26

Conread position: 3-192
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 23

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-192
Cow position:
Alignm length: 203
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 26

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 27

Conread position: 3-192
Cow position:
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 3-193
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 111, 26

Conread position: 3-194
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-194
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 26

Conread position: 3-198
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-199
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 205
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 17

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 27

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 143, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 144, 14

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 26

Conread position: 3-201
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 26

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 27

Conread position: 3-202
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 144, 24

Conread position: 3-203
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 133, 25

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 26

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 143, 23

Conread position: 3-216
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 27

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 128, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 8, 27

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 25

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 140, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 27

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-218
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 144, 31

Conread position: 3-222
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 144, 27

Conread position: 3-222
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 24

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 26

Conread position: 3-224
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 3-225
Cow position:
Alignm length: 230
Alignm identity: 157
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 142, 26

Conread position: 3-225
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-229
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-236
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 26

Conread position: 3-248
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 3-248
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 56

Conread position: 3-252
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 149, 26

Conread position: 3-271
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 142, 26

Conread position: 3-284
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 70, 26

Conread position: 4-145
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 115, 25

Conread position: 4-145
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 4-182
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 25

Conread position: 4-188
Cow position:
Alignm length: 190
Alignm identity: 150
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 143, 25

Conread position: 4-192
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 143, 25

Conread position: 4-192
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 143, 25

Conread position: 4-194
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 143, 9

Conread position: 4-201
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 141, 25

Conread position: 4-216
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 25

Conread position: 4-224
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 143, 30

Conread position: 5-133
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 5-145
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 24

Conread position: 5-182
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 24

Conread position: 5-182
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 142, 24

Conread position: 5-222
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 142, 24

Conread position: 9-201
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 138, 20

Conread position: 9-217
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 138, 21

Conread position: 10-183
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 19

Conread position: 10-188
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 104, 19

Conread position: 12-194
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 135, 17

Conread position: 17-194
Cow position:
Alignm length: 185
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 128, 12

Conread position: 20-201
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 127, 9

Conread position: 21-217
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 126, 8

Conread position: 22-159
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 7

Conread position: 22-193
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 7

Conread position: 22-217
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 7

Conread position: 29-182
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 112, 36

Conread position: 29-202
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 29

Conread position: 29-224
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 118, 29

Conread position: 31-194
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 12

Conread position: 31-217
Cow position:
Alignm length: 193
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 102, 27

Conread position: 34-201
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 112, 52

Conread position: 37-182
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 21

Conread position: 177-289
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 181-282
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-282
Cow position:
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 181-290
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 181-292
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 181-293
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 181-293
Cow position:
Alignm length: 113
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.