Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 2-202
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 56

Conread position: 3-119
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 3-142
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-144
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-148
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-163
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 26

Conread position: 3-163
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 3-168
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-175
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-182
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 42, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 25

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 14, 27

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 24

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 31

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 144, 27

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 142, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 24

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 143, 27

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 144
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 143, 27

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 27

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 143, 26

Conread position: 3-192
Cow position:
Alignm length: 198
Alignm identity: 142
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 6

Conread position: 3-192
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 131, 26

Conread position: 3-194
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 26

Conread position: 3-194
Cow position:
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 26

Conread position: 3-198
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 24

Conread position: 3-198
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 126, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 6

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 27

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 143, 26

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-207
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-209
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-216
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 27

Conread position: 3-216
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 36

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 32

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 133, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 27

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 32, 23

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-218
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-220
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-222
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-222
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 91, 26

Conread position: 3-222
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 26

Conread position: 3-222
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 142, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 237
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 27

Conread position: 3-234
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 26

Conread position: 3-237
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 19

Conread position: 3-248
Cow position:
Alignm length: 255
Alignm identity: 172
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-286
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 26

Conread position: 4-145
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 4-146
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 25

Conread position: 4-181
Cow position:
Alignm length: 182
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 25

Conread position: 4-183
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 142, 25

Conread position: 4-183
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 25

Conread position: 4-217
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 25

Conread position: 4-229
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 105, 25

Conread position: 5-180
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 138, 24

Conread position: 5-182
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 24

Conread position: 5-182
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 142, 24

Conread position: 5-182
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 142, 24

Conread position: 6-188
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 23

Conread position: 6-201
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 23

Conread position: 6-217
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 23

Conread position: 7-217
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 15

Conread position: 9-139
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 9-182
Cow position:
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 138, 20

Conread position: 9-199
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 16

Conread position: 9-207
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 20

Conread position: 9-224
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 20

Conread position: 9-245
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 133, 21

Conread position: 10-192
Cow position:
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 137, 17

Conread position: 11-183
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 136, 18

Conread position: 11-192
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 136, 18

Conread position: 16-182
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 131, 13

Conread position: 16-182
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 131, 13

Conread position: 20-201
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 126, 9

Conread position: 24-206
Cow position:
Alignm length: 191
Alignm identity: 142
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 119, 34

Conread position: 24-217
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 34

Conread position: 29-145
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 29-182
Cow position:
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 29

Conread position: 29-194
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 118, 30

Conread position: 29-217
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 59

Conread position: 34-207
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 24

Conread position: 34-217
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 113, 24

Conread position: 34-224
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 113, 24

Conread position: 38-218
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 21

Conread position: 46-278
Cow position:
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 45

Conread position: 157-290
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 18

Conread position: 172-290
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 173-283
Cow position:
Alignm length: 111
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-289
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 181-290
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 181-290
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 181-292
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 181-292
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 183-290
Cow position:
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.