Cow genome map
| Conread name: | rpigca0_010438.y1 |
| Conread position: | 3-139 |
| Cow position: | chr14:9032063-9031931 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 3-141 |
| Cow position: | chr14:8754868-8754733 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-141 |
| Cow position: | chr14:31129815-31129953 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 3-141 |
| Cow position: | chr14:48828598-48828732 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-144 |
| Cow position: | chr14:36776144-36776006 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:18308605-18308744 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:20666480-20666619 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:41132162-41132301 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:41212433-41212294 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:42154195-42154334 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr14:49421205-49421344 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-146 |
| Cow position: | chr14:27792075-27791935 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-156 |
| Cow position: | chr14:28098345-28098191 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-156 |
| Cow position: | chr14:41749232-41749385 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-179 |
| Cow position: | chr14:17525731-17525905 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-179 |
| Cow position: | chr14:39519247-39519068 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-180 |
| Cow position: | chr14:19957368-19957549 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 3-182 |
| Cow position: | chr14:8997886-8997702 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-182 |
| Cow position: | chr14:13860172-13859989 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr14:16353106-16352920 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 3-182 |
| Cow position: | chr14:17219685-17219870 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 3-182 |
| Cow position: | chr14:19887517-19887705 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 109, 21 |
| Conread position: | 3-182 |
| Cow position: | chr14:21201287-21201471 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-192 |
| Cow position: | chr14:13723059-13723252 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-192 |
| Cow position: | chr14:25779645-25779444 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 3-192 |
| Cow position: | chr14:39433739-39433933 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-194 |
| Cow position: | chr14:18940777-18940964 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 143, 18 |
| Conread position: | 3-195 |
| Cow position: | chr14:34984381-34984180 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 3-196 |
| Cow position: | chr14:35543975-35544171 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-201 |
| Cow position: | chr14:17756098-17755900 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-201 |
| Cow position: | chr14:45046124-45046324 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-207 |
| Cow position: | chr14:12519791-12519997 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-207 |
| Cow position: | chr14:19189579-19189372 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-216 |
| Cow position: | chr14:35650659-35650876 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 67, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:1727522-1727739 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:2037402-2037618 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:5501611-5501827 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:11473947-11473731 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:13385915-13385698 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:22381012-22381230 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:24992354-24992137 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 3-217 |
| Cow position: | chr14:27040013-27039797 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:28988231-28988016 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:37883374-37883592 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:38295751-38295967 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 3-217 |
| Cow position: | chr14:40462112-40461897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:45300287-45300504 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-217 |
| Cow position: | chr14:46331247-46331031 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-224 |
| Cow position: | chr14:16341902-16342123 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-224 |
| Cow position: | chr14:19654428-19654645 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 149, 26 |
| Conread position: | 3-224 |
| Cow position: | chr14:33337645-33337868 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 3-224 |
| Cow position: | chr14:33834633-33834412 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-225 |
| Cow position: | chr14:20640087-20640304 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-248 |
| Cow position: | chr14:39774515-39774763 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-271 |
| Cow position: | chr14:21534506-21534776 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 4-145 |
| Cow position: | chr14:32471185-32471045 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 25 |
| Conread position: | 4-182 |
| Cow position: | chr14:44293996-44294178 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 5-180 |
| Cow position: | chr14:30760747-30760568 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 5-194 |
| Cow position: | chr14:44382659-44382853 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 5-217 |
| Cow position: | chr14:20600925-20600706 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 110, 24 |
| Conread position: | 5-217 |
| Cow position: | chr14:40346639-40346853 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 141, 24 |
| Conread position: | 9-182 |
| Cow position: | chr14:14326572-14326747 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 9-182 |
| Cow position: | chr14:39617851-39618027 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 9-182 |
| Cow position: | chr14:47584114-47584291 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 138, 28 |
| Conread position: | 9-196 |
| Cow position: | chr14:50027745-50027550 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 9-217 |
| Cow position: | chr14:44237165-44237375 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 138, 21 |
| Conread position: | 9-232 |
| Cow position: | chr14:27865602-27865825 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 10-201 |
| Cow position: | chr14:23591942-23591749 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 137, 19 |
| Conread position: | 10-217 |
| Cow position: | chr14:21964650-21964441 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 137, 19 |
| Conread position: | 16-207 |
| Cow position: | chr14:22074493-22074687 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 16-217 |
| Cow position: | chr14:21597085-21597289 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 20-224 |
| Cow position: | chr14:28378885-28378679 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 181-289 |
| Cow position: | chr14:24894037-24893930 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 181-290 |
| Cow position: | chr14:2037660-2037763 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 181-292 |
| Cow position: | chr14:20736806-20736696 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 181-292 |
| Cow position: | chr14:39769953-39770065 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 181-293 |
| Cow position: | chr14:22989311-22989201 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 182-293 |
| Cow position: | chr14:5501876-5501988 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.