Cow genome map
Conread name: | rpigca0_010438.y1 |
Conread position: | 1-145 |
Cow position: | chr18:32245257-32245116 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 2-196 |
Cow position: | chr18:38090116-38089915 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 152 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 122, 27 |
Conread position: | 3-113 |
Cow position: | chr18:10861942-10861834 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-134 |
Cow position: | chr18:33407108-33407236 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-140 |
Cow position: | chr18:31711998-31711861 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 50, 26 |
Conread position: | 3-142 |
Cow position: | chr18:11694417-11694552 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-142 |
Cow position: | chr18:45104957-45104821 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-144 |
Cow position: | chr18:6309530-6309666 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-145 |
Cow position: | chr18:10516651-10516790 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 113 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-145 |
Cow position: | chr18:29028535-29028394 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 71, 26 |
Conread position: | 3-145 |
Cow position: | chr18:37002105-37002244 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-146 |
Cow position: | chr18:27529833-27529974 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 107, 48 |
Conread position: | 3-148 |
Cow position: | chr18:13292978-13293121 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 15, 27 |
Conread position: | 3-156 |
Cow position: | chr18:81234-81387 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 43, 26 |
Conread position: | 3-175 |
Cow position: | chr18:24978098-24977926 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-181 |
Cow position: | chr18:40758682-40758864 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 137 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-182 |
Cow position: | chr18:268579-268396 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 145, 26 |
Conread position: | 3-182 |
Cow position: | chr18:11680161-11680343 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr18:12118374-12118192 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr18:14048193-14048365 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-182 |
Cow position: | chr18:16378440-16378624 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-182 |
Cow position: | chr18:27457284-27457103 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr18:28292289-28292105 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr18:29862792-29862609 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 133 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-182 |
Cow position: | chr18:35012835-35012653 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 139 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-182 |
Cow position: | chr18:39875820-39875638 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 140 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 143, 19 |
Conread position: | 3-182 |
Cow position: | chr18:48451144-48451331 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 144 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 73, 27 |
Conread position: | 3-183 |
Cow position: | chr18:7076240-7076422 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 147 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-183 |
Cow position: | chr18:25206827-25206644 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 142 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-183 |
Cow position: | chr18:48291409-48291226 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-183 |
Cow position: | chr18:49542959-49543143 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 131 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-192 |
Cow position: | chr18:22275572-22275379 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-192 |
Cow position: | chr18:22790597-22790407 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 148 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-192 |
Cow position: | chr18:28658438-28658245 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 147, 31 |
Conread position: | 3-192 |
Cow position: | chr18:31082865-31082675 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-192 |
Cow position: | chr18:37024088-37023893 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 140 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 55, 26 |
Conread position: | 3-193 |
Cow position: | chr18:6878157-6877965 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 140 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-201 |
Cow position: | chr18:7649463-7649662 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-201 |
Cow position: | chr18:9365360-9365560 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-201 |
Cow position: | chr18:37691126-37690927 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 149 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-201 |
Cow position: | chr18:42223801-42224004 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 150 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 3-201 |
Cow position: | chr18:47183820-47183615 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 153 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 70, 26 |
Conread position: | 3-207 |
Cow position: | chr18:30793930-30794131 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 156 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-207 |
Cow position: | chr18:36649192-36649403 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 99, 26 |
Conread position: | 3-217 |
Cow position: | chr18:601700-601484 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-217 |
Cow position: | chr18:4950029-4950238 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 143, 23 |
Conread position: | 3-217 |
Cow position: | chr18:6829594-6829377 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 163 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr18:16094695-16094909 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr18:16155028-16154810 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 3-217 |
Cow position: | chr18:23659089-23658873 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-217 |
Cow position: | chr18:23700399-23700183 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 142, 33 |
Conread position: | 3-217 |
Cow position: | chr18:42966308-42966524 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 161 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr18:43950310-43950525 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 161 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 112, 27 |
Conread position: | 3-218 |
Cow position: | chr18:55590003-55589788 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 144, 23 |
Conread position: | 3-220 |
Cow position: | chr18:19760975-19761195 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 99, 25 |
Conread position: | 3-225 |
Cow position: | chr18:727102-727327 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-229 |
Cow position: | chr18:29759188-29759419 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-242 |
Cow position: | chr18:36233058-36232820 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 175 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-289 |
Cow position: | chr18:1955054-1954753 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 215 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 4-139 |
Cow position: | chr18:45572570-45572702 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 4-183 |
Cow position: | chr18:51191281-51191098 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 149 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 142, 25 |
Conread position: | 4-192 |
Cow position: | chr18:11779139-11779328 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 143, 25 |
Conread position: | 4-207 |
Cow position: | chr18:8967475-8967680 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 143, 25 |
Conread position: | 4-217 |
Cow position: | chr18:9557556-9557342 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 132, 25 |
Conread position: | 4-217 |
Cow position: | chr18:38984850-38985062 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 141, 25 |
Conread position: | 5-221 |
Cow position: | chr18:33606103-33606320 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 162 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 142, 24 |
Conread position: | 7-182 |
Cow position: | chr18:10097632-10097819 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 142 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 112, 22 |
Conread position: | 9-182 |
Cow position: | chr18:36907698-36907521 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 104, 20 |
Conread position: | 9-182 |
Cow position: | chr18:36912224-36912047 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 130 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 104, 20 |
Conread position: | 9-217 |
Cow position: | chr18:10574529-10574739 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 154 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 103, 20 |
Conread position: | 10-207 |
Cow position: | chr18:28929621-28929422 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 149 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 135, 19 |
Conread position: | 11-175 |
Cow position: | chr18:51406415-51406245 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 48, 18 |
Conread position: | 12-217 |
Cow position: | chr18:4540394-4540186 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 153 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 32, 6 |
Conread position: | 16-180 |
Cow position: | chr18:24021875-24022042 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 127 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 129, 6 |
Conread position: | 16-201 |
Cow position: | chr18:7964714-7964901 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 143 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 130, 13 |
Conread position: | 17-207 |
Cow position: | chr18:19193861-19193669 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 143 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 130, 20 |
Conread position: | 21-145 |
Cow position: | chr18:30186430-30186309 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 33-163 |
Cow position: | chr18:18919439-18919304 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 112, 25 |
Conread position: | 33-217 |
Cow position: | chr18:44484554-44484366 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 114, 54 |
Conread position: | 34-217 |
Cow position: | chr18:9007648-9007835 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 112, 24 |
Conread position: | 41-207 |
Cow position: | chr18:28101133-28101302 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 106, 18 |
Conread position: | 181-283 |
Cow position: | chr18:11671543-11671645 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 83 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 181-290 |
Cow position: | chr18:19619682-19619790 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 94 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 181-290 |
Cow position: | chr18:28101360-28101469 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 95 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 75, 105 |
Conread position: | 181-290 |
Cow position: | chr18:35535552-35535445 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.