Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 2-192
Cow position: chr22:44740603-44740798 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 72, 27

Conread position: 3-122
Cow position: chr22:42933995-42933879 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-133
Cow position: chr22:43292414-43292282 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 26

Conread position: 3-141
Cow position: chr22:22147445-22147583 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 27

Conread position: 3-145
Cow position: chr22:877022-877161 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 27

Conread position: 3-145
Cow position: chr22:11697922-11697784 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position: chr22:14882612-14882473 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-146
Cow position: chr22:799587-799728 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 27

Conread position: 3-146
Cow position: chr22:46665988-46665848 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-176
Cow position: chr22:36193368-36193538 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 30, 23

Conread position: 3-177
Cow position: chr22:15951947-15951769 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-181
Cow position: chr22:39695810-39695992 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr22:2560752-2560568 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr22:4292282-4292462 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr22:6622747-6622563 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 27

Conread position: 3-182
Cow position: chr22:16044934-16044747 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 26

Conread position: 3-182
Cow position: chr22:30268842-30269024 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr22:30954539-30954721 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 144, 27

Conread position: 3-182
Cow position: chr22:34605890-34606073 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 143, 27

Conread position: 3-182
Cow position: chr22:39033069-39033252 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr22:43743805-43743622 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position: chr22:779878-780058 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position: chr22:7912983-7913171 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 3-183
Cow position: chr22:11612927-11613111 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position: chr22:12975112-12974928 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 26

Conread position: 3-183
Cow position: chr22:21502236-21502419 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 144, 27

Conread position: 3-183
Cow position: chr22:26098109-26097927 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 145, 26

Conread position: 3-183
Cow position: chr22:36564108-36563923 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position: chr22:39601987-39602170 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-184
Cow position: chr22:22862050-22861865 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-186
Cow position: chr22:36609971-36609787 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 143, 26

Conread position: 3-189
Cow position: chr22:26785637-26785827 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 140, 26

Conread position: 3-192
Cow position: chr22:12637182-12637374 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-194
Cow position: chr22:25743469-25743273 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 143, 26

Conread position: 3-196
Cow position: chr22:6493599-6493793 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 26

Conread position: 3-198
Cow position: chr22:5282007-5282205 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 23

Conread position: 3-201
Cow position: chr22:8882520-8882718 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position: chr22:33094060-33094261 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 106, 23

Conread position: 3-207
Cow position: chr22:13735753-13735554 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 151, 27

Conread position: 3-207
Cow position: chr22:15059470-15059676 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 143, 26

Conread position: 3-207
Cow position: chr22:31870752-31870546 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 143, 26

Conread position: 3-207
Cow position: chr22:32514016-32513802 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 26

Conread position: 3-209
Cow position: chr22:26018979-26018774 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 55

Conread position: 3-217
Cow position: chr22:1874222-1874437 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 27

Conread position: 3-217
Cow position: chr22:2624050-2623830 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 26

Conread position: 3-217
Cow position: chr22:4120066-4119853 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr22:5364239-5364023 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr22:5467869-5467653 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 26

Conread position: 3-217
Cow position: chr22:8357113-8357329 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr22:10415414-10415630 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position: chr22:13241934-13242151 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 27

Conread position: 3-217
Cow position: chr22:27337443-27337226 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 107, 26

Conread position: 3-217
Cow position: chr22:43041025-43040808 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 3-222
Cow position: chr22:25691520-25691297 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 26

Conread position: 3-222
Cow position: chr22:35533877-35533657 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 35, 26

Conread position: 3-224
Cow position: chr22:4076390-4076176 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position: chr22:34735149-34735372 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 142, 26

Conread position: 3-228
Cow position: chr22:36587449-36587221 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 26

Conread position: 3-237
Cow position: chr22:30963610-30963839 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 150, 26

Conread position: 3-242
Cow position: chr22:10323208-10323445 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 27

Conread position: 3-248
Cow position: chr22:18021517-18021273 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 171
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-278
Cow position: chr22:10685579-10685302 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 4-182
Cow position: chr22:13950680-13950860 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 25

Conread position: 4-182
Cow position: chr22:23803182-23803001 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 142, 25

Conread position: 4-182
Cow position: chr22:32651014-32651191 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 143, 25

Conread position: 4-182
Cow position: chr22:35903218-35903038 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 117, 25

Conread position: 4-207
Cow position: chr22:12893101-12892896 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 54

Conread position: 4-217
Cow position: chr22:27432481-27432265 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 142, 25

Conread position: 5-175
Cow position: chr22:24734817-24734643 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 24

Conread position: 5-182
Cow position: chr22:3011456-3011275 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 142, 24

Conread position: 5-183
Cow position: chr22:9370606-9370789 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 142, 24

Conread position: 5-192
Cow position: chr22:1342246-1342434 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 22

Conread position: 5-217
Cow position: chr22:17059619-17059834 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 142, 46

Conread position: 5-217
Cow position: chr22:34894475-34894689 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 110, 24

Conread position: 5-222
Cow position: chr22:21355652-21355441 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 138, 18

Conread position: 5-222
Cow position: chr22:36583128-36582909 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 142, 24

Conread position: 9-202
Cow position: chr22:31213076-31213269 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 138, 20

Conread position: 11-145
Cow position: chr22:38439645-38439514 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 11-183
Cow position: chr22:11922345-11922177 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 11-183
Cow position: chr22:13017274-13017097 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 110, 18

Conread position: 11-201
Cow position: chr22:26167067-26166875 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 18

Conread position: 11-207
Cow position: chr22:15920128-15919930 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 126, 19

Conread position: 16-218
Cow position: chr22:1710077-1710280 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 13

Conread position: 17-139
Cow position: chr22:43788629-43788510 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 20-183
Cow position: chr22:10161483-10161649 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 9

Conread position: 20-217
Cow position: chr22:44463047-44463246 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 9

Conread position: 24-218
Cow position: chr22:5041846-5042044 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 123, 63

Conread position: 28-202
Cow position: chr22:3270088-3269921 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 28-220
Cow position: chr22:36555405-36555210 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 31

Conread position: 29-183
Cow position: chr22:3254273-3254115 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 29

Conread position: 29-192
Cow position: chr22:33986238-33986073 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 29

Conread position: 29-217
Cow position: chr22:3301799-3301607 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 31

Conread position: 30-217
Cow position: chr22:8323777-8323963 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 30

Conread position: 35-202
Cow position: chr22:28071087-28071257 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 7, 24

Conread position: 35-217
Cow position: chr22:10532026-10532211 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 112, 23

Conread position: 42-224
Cow position: chr22:11146440-11146627 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 16

Conread position: 181-289
Cow position: chr22:10683902-10683795 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 0

Show alignments to all cow chromosomes.