Cow genome map
| Conread name: | rpigca0_010438.y1 |
| Conread position: | 1-207 |
| Cow position: | chr26:31781466-31781672 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 2-196 |
| Cow position: | chr26:6037920-6037725 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 27 |
| Conread position: | 3-137 |
| Cow position: | chr26:21991084-21991215 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 3-144 |
| Cow position: | chr26:28320156-28320019 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-151 |
| Cow position: | chr26:6448086-6447941 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-174 |
| Cow position: | chr26:9632819-9632638 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 3-182 |
| Cow position: | chr26:4875369-4875552 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr26:16796702-16796519 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr26:25393547-25393735 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 137, 26 |
| Conread position: | 3-183 |
| Cow position: | chr26:8352477-8352662 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-183 |
| Cow position: | chr26:9087954-9088143 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-191 |
| Cow position: | chr26:23315363-23315170 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-192 |
| Cow position: | chr26:9100230-9100039 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-194 |
| Cow position: | chr26:25442425-25442231 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-195 |
| Cow position: | chr26:8307993-8307798 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-198 |
| Cow position: | chr26:8820531-8820332 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 120, 27 |
| Conread position: | 3-198 |
| Cow position: | chr26:30569361-30569163 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-201 |
| Cow position: | chr26:6714765-6714564 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-201 |
| Cow position: | chr26:13976150-13975950 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-201 |
| Cow position: | chr26:27930813-27930613 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 3-202 |
| Cow position: | chr26:1329048-1329246 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-207 |
| Cow position: | chr26:14897850-14898053 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-207 |
| Cow position: | chr26:19347664-19347458 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-216 |
| Cow position: | chr26:19698428-19698213 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 3-217 |
| Cow position: | chr26:1390744-1390960 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 3-217 |
| Cow position: | chr26:6030242-6030025 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 3-217 |
| Cow position: | chr26:6837331-6837546 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 3-217 |
| Cow position: | chr26:12807994-12807779 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 144, 32 |
| Conread position: | 3-217 |
| Cow position: | chr26:14395716-14395500 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 3-217 |
| Cow position: | chr26:14486515-14486299 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 3-217 |
| Cow position: | chr26:21539155-21539370 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 21 |
| Conread position: | 3-217 |
| Cow position: | chr26:21909207-21908991 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-217 |
| Cow position: | chr26:28236703-28236919 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-222 |
| Cow position: | chr26:28442493-28442270 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 107, 84 |
| Conread position: | 3-224 |
| Cow position: | chr26:8746515-8746291 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 3-224 |
| Cow position: | chr26:32670978-32670752 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 3-229 |
| Cow position: | chr26:13706469-13706244 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-278 |
| Cow position: | chr26:13774023-13774300 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 147, 26 |
| Conread position: | 4-163 |
| Cow position: | chr26:11129559-11129396 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 4-207 |
| Cow position: | chr26:8034377-8034583 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 4-207 |
| Cow position: | chr26:16720438-16720643 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 5-119 |
| Cow position: | chr26:20746952-20747064 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-182 |
| Cow position: | chr26:19796902-19797083 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 131, 25 |
| Conread position: | 5-182 |
| Cow position: | chr26:30806991-30806810 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 138, 24 |
| Conread position: | 5-207 |
| Cow position: | chr26:13801606-13801808 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 142, 24 |
| Conread position: | 6-193 |
| Cow position: | chr26:8897368-8897177 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 10-182 |
| Cow position: | chr26:23600266-23600090 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 137, 19 |
| Conread position: | 11-144 |
| Cow position: | chr26:24280227-24280357 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-248 |
| Cow position: | chr26:31138200-31137956 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 17-183 |
| Cow position: | chr26:6514340-6514511 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 126, 12 |
| Conread position: | 21-190 |
| Cow position: | chr26:2399469-2399639 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 115, 8 |
| Conread position: | 29-207 |
| Cow position: | chr26:24239485-24239668 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 29 |
| Conread position: | 30-146 |
| Cow position: | chr26:33012122-33012008 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 32-222 |
| Cow position: | chr26:3757337-3757530 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 35-201 |
| Cow position: | chr26:11338036-11338204 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 163-284 |
| Cow position: | chr26:2676251-2676131 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 181-284 |
| Cow position: | chr26:26888351-26888248 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-293 |
| Cow position: | chr26:7148516-7148405 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
Show alignments to all cow chromosomes.