Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 1-192
Cow position: chr27:12277821-12278017 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 127, 28

Conread position: 1-207
Cow position: chr27:15668015-15668226 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 146, 28

Conread position: 2-183
Cow position: chr27:20629483-20629298 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 27

Conread position: 3-139
Cow position: chr27:16263769-16263636 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 3-139
Cow position: chr27:26223807-26223940 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position: chr27:2900788-2900926 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position: chr27:13409713-13409850 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-146
Cow position: chr27:23454689-23454836 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 26

Conread position: 3-146
Cow position: chr27:25809069-25809209 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-156
Cow position: chr27:13876179-13876027 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-180
Cow position: chr27:1502210-1502389 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr27:4389756-4389939 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 122, 26

Conread position: 3-182
Cow position: chr27:22559532-22559349 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 112, 26

Conread position: 3-182
Cow position: chr27:26087676-26087500 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 23

Conread position: 3-182
Cow position: chr27:27930980-27931163 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position: chr27:28907519-28907337 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 33

Conread position: 3-186
Cow position: chr27:4719442-4719628 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-191
Cow position: chr27:16823260-16823072 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 26

Conread position: 3-192
Cow position: chr27:17397000-17397194 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 26

Conread position: 3-194
Cow position: chr27:15272360-15272166 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position: chr27:23502916-23502715 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 26

Conread position: 3-207
Cow position: chr27:23128906-23128702 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 140, 26

Conread position: 3-207
Cow position: chr27:24999283-24999488 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr27:6074368-6074154 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 143, 24

Conread position: 3-217
Cow position: chr27:11434876-11435093 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr27:13317511-13317727 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 144, 25

Conread position: 3-217
Cow position: chr27:15644003-15644219 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position: chr27:15867840-15867625 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 140, 26

Conread position: 3-217
Cow position: chr27:16984249-16984025 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 26

Conread position: 3-217
Cow position: chr27:21418541-21418756 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position: chr27:26785528-26785744 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position: chr27:26856757-26856973 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-220
Cow position: chr27:15871615-15871397 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 144, 27

Conread position: 3-225
Cow position: chr27:4673469-4673246 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 144, 31

Conread position: 3-226
Cow position: chr27:14669926-14670152 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 27

Conread position: 3-228
Cow position: chr27:11470247-11470474 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 107, 26

Conread position: 4-141
Cow position: chr27:26796685-26796818 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 4-144
Cow position: chr27:13198357-13198221 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 4-145
Cow position: chr27:13442385-13442523 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 21

Conread position: 4-207
Cow position: chr27:15349352-15349555 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 25

Conread position: 5-139
Cow position: chr27:1768182-1768313 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 5-145
Cow position: chr27:27527755-27527892 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 5-192
Cow position: chr27:27460139-27460329 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 142, 24

Conread position: 5-194
Cow position: chr27:25719236-25719430 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 120, 24

Conread position: 5-224
Cow position: chr27:9337965-9337744 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 24

Conread position: 5-229
Cow position: chr27:20554404-20554179 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 149, 29

Conread position: 9-145
Cow position: chr27:23511566-23511434 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 9-182
Cow position: chr27:8942243-8942421 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 20

Conread position: 9-183
Cow position: chr27:5843262-5843436 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 147, 20

Conread position: 9-248
Cow position: chr27:1189365-1189608 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 135, 20

Conread position: 9-248
Cow position: chr27:4983153-4983396 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 136, 20

Conread position: 16-201
Cow position: chr27:22440583-22440395 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 131, 13

Conread position: 17-182
Cow position: chr27:2298853-2298683 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 12

Conread position: 17-192
Cow position: chr27:10275022-10275201 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 128, 12

Conread position: 29-217
Cow position: chr27:15925764-15925572 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 118, 29

Conread position: 32-207
Cow position: chr27:23595697-23595518 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 6, 16

Conread position: 177-289
Cow position: chr27:22220748-22220637 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 181-290
Cow position: chr27:15858900-15859004 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.