Cow genome map
Conread name: | rpigca0_010438.y1 |
Conread position: | 1-192 |
Cow position: | chr27:12277821-12278017 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 127, 28 |
Conread position: | 1-207 |
Cow position: | chr27:15668015-15668226 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 146, 28 |
Conread position: | 2-183 |
Cow position: | chr27:20629483-20629298 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 134 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-139 |
Cow position: | chr27:16263769-16263636 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 3-139 |
Cow position: | chr27:26223807-26223940 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-145 |
Cow position: | chr27:2900788-2900926 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-145 |
Cow position: | chr27:13409713-13409850 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 3-146 |
Cow position: | chr27:23454689-23454836 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 41, 26 |
Conread position: | 3-146 |
Cow position: | chr27:25809069-25809209 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-156 |
Cow position: | chr27:13876179-13876027 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 123 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-180 |
Cow position: | chr27:1502210-1502389 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 136 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr27:4389756-4389939 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 145 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 122, 26 |
Conread position: | 3-182 |
Cow position: | chr27:22559532-22559349 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 141 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 112, 26 |
Conread position: | 3-182 |
Cow position: | chr27:26087676-26087500 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 136 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 30, 23 |
Conread position: | 3-182 |
Cow position: | chr27:27930980-27931163 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr27:28907519-28907337 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 131 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 144, 33 |
Conread position: | 3-186 |
Cow position: | chr27:4719442-4719628 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 140 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-191 |
Cow position: | chr27:16823260-16823072 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 145, 26 |
Conread position: | 3-192 |
Cow position: | chr27:17397000-17397194 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 147 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 135, 26 |
Conread position: | 3-194 |
Cow position: | chr27:15272360-15272166 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 140 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-201 |
Cow position: | chr27:23502916-23502715 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 3-207 |
Cow position: | chr27:23128906-23128702 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 155 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-207 |
Cow position: | chr27:24999283-24999488 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr27:6074368-6074154 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 143, 24 |
Conread position: | 3-217 |
Cow position: | chr27:11434876-11435093 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr27:13317511-13317727 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 162 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 144, 25 |
Conread position: | 3-217 |
Cow position: | chr27:15644003-15644219 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 152 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr27:15867840-15867625 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-217 |
Cow position: | chr27:16984249-16984025 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 56, 26 |
Conread position: | 3-217 |
Cow position: | chr27:21418541-21418756 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr27:26785528-26785744 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 158 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-217 |
Cow position: | chr27:26856757-26856973 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-220 |
Cow position: | chr27:15871615-15871397 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 162 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-225 |
Cow position: | chr27:4673469-4673246 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 144, 31 |
Conread position: | 3-226 |
Cow position: | chr27:14669926-14670152 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 72, 27 |
Conread position: | 3-228 |
Cow position: | chr27:11470247-11470474 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 4-141 |
Cow position: | chr27:26796685-26796818 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 4-144 |
Cow position: | chr27:13198357-13198221 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 4-145 |
Cow position: | chr27:13442385-13442523 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 26, 21 |
Conread position: | 4-207 |
Cow position: | chr27:15349352-15349555 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 141, 25 |
Conread position: | 5-139 |
Cow position: | chr27:1768182-1768313 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 5-145 |
Cow position: | chr27:27527755-27527892 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 5-192 |
Cow position: | chr27:27460139-27460329 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 137 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 142, 24 |
Conread position: | 5-194 |
Cow position: | chr27:25719236-25719430 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 120, 24 |
Conread position: | 5-224 |
Cow position: | chr27:9337965-9337744 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 163 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 142, 24 |
Conread position: | 5-229 |
Cow position: | chr27:20554404-20554179 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 164 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 149, 29 |
Conread position: | 9-145 |
Cow position: | chr27:23511566-23511434 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 9-182 |
Cow position: | chr27:8942243-8942421 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 138, 20 |
Conread position: | 9-183 |
Cow position: | chr27:5843262-5843436 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 126 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 147, 20 |
Conread position: | 9-248 |
Cow position: | chr27:1189365-1189608 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 135, 20 |
Conread position: | 9-248 |
Cow position: | chr27:4983153-4983396 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 136, 20 |
Conread position: | 16-201 |
Cow position: | chr27:22440583-22440395 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 137 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 131, 13 |
Conread position: | 17-182 |
Cow position: | chr27:2298853-2298683 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 127 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 17-192 |
Cow position: | chr27:10275022-10275201 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 128, 12 |
Conread position: | 29-217 |
Cow position: | chr27:15925764-15925572 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 118, 29 |
Conread position: | 32-207 |
Cow position: | chr27:23595697-23595518 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 6, 16 |
Conread position: | 177-289 |
Cow position: | chr27:22220748-22220637 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 94 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 181-290 |
Cow position: | chr27:15858900-15859004 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 92 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.