Cow genome map
Conread name: | rpigca0_010438.y1 |
Conread position: | 1-180 |
Cow position: | chr28:34082509-34082326 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 145, 28 |
Conread position: | 2-282 |
Cow position: | chr28:23410721-23410457 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 198 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 160, 27 |
Conread position: | 3-134 |
Cow position: | chr28:19023570-19023442 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-143 |
Cow position: | chr28:2862418-2862553 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-144 |
Cow position: | chr28:22320801-22320941 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 40, 26 |
Conread position: | 3-145 |
Cow position: | chr28:9285856-9285716 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-145 |
Cow position: | chr28:18590771-18590908 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 3-149 |
Cow position: | chr28:33640332-33640476 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-152 |
Cow position: | chr28:4308367-4308219 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 124, 26 |
Conread position: | 3-156 |
Cow position: | chr28:4070473-4070627 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-175 |
Cow position: | chr28:5768711-5768887 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-176 |
Cow position: | chr28:25596172-25596347 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-179 |
Cow position: | chr28:25767737-25767917 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 3-181 |
Cow position: | chr28:11451966-11451785 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 138 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 142, 31 |
Conread position: | 3-182 |
Cow position: | chr28:7372743-7372560 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 136 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-182 |
Cow position: | chr28:7685167-7684985 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-182 |
Cow position: | chr28:13865309-13865496 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 138 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 106, 27 |
Conread position: | 3-182 |
Cow position: | chr28:34199943-34199755 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 3-183 |
Cow position: | chr28:1537192-1537373 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 140, 12 |
Conread position: | 3-183 |
Cow position: | chr28:21672322-21672505 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 136 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-191 |
Cow position: | chr28:6577162-6577360 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 112, 26 |
Conread position: | 3-191 |
Cow position: | chr28:11427027-11426836 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 150 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-192 |
Cow position: | chr28:7864838-7865032 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-192 |
Cow position: | chr28:8716988-8716794 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 138 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 142, 27 |
Conread position: | 3-192 |
Cow position: | chr28:10529956-10529764 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 145 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-192 |
Cow position: | chr28:21104336-21104143 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-192 |
Cow position: | chr28:24686129-24686323 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 3-194 |
Cow position: | chr28:10762193-10762377 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 135 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 74, 26 |
Conread position: | 3-201 |
Cow position: | chr28:10478819-10478617 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 37, 58 |
Conread position: | 3-201 |
Cow position: | chr28:10900329-10900528 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-201 |
Cow position: | chr28:20124295-20124497 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 52, 26 |
Conread position: | 3-201 |
Cow position: | chr28:21598743-21598545 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 158 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-207 |
Cow position: | chr28:16387079-16387288 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 151 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 62, 26 |
Conread position: | 3-207 |
Cow position: | chr28:25056478-25056685 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 149 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-207 |
Cow position: | chr28:32717494-32717287 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-216 |
Cow position: | chr28:31842175-31841959 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 159 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 135, 26 |
Conread position: | 3-217 |
Cow position: | chr28:5805026-5805243 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 79, 26 |
Conread position: | 3-217 |
Cow position: | chr28:6047554-6047770 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 152 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr28:10578109-10577893 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 155 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr28:16211584-16211373 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 157 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr28:19300803-19301020 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 107, 26 |
Conread position: | 3-217 |
Cow position: | chr28:21354732-21354948 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-217 |
Cow position: | chr28:23254279-23254066 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 144, 27 |
Conread position: | 3-217 |
Cow position: | chr28:24603688-24603903 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 156 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr28:26727903-26727688 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-217 |
Cow position: | chr28:29035888-29035672 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 153 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 142, 26 |
Conread position: | 3-223 |
Cow position: | chr28:8022602-8022381 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-224 |
Cow position: | chr28:3144378-3144156 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 140, 26 |
Conread position: | 3-227 |
Cow position: | chr28:7882312-7882538 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 163 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 144, 26 |
Conread position: | 3-236 |
Cow position: | chr28:10172955-10172715 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 169 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 26 |
Conread position: | 3-245 |
Cow position: | chr28:22132430-22132681 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 126, 26 |
Conread position: | 3-248 |
Cow position: | chr28:4535989-4536227 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 3-263 |
Cow position: | chr28:27428226-27428491 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 184 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 73, 27 |
Conread position: | 4-131 |
Cow position: | chr28:4586488-4586609 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 4-185 |
Cow position: | chr28:15410364-15410550 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 138 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 11, 26 |
Conread position: | 4-198 |
Cow position: | chr28:8787070-8787256 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 136, 25 |
Conread position: | 4-217 |
Cow position: | chr28:746674-746894 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 26, 59 |
Conread position: | 4-217 |
Cow position: | chr28:21844466-21844680 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 161 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 142, 25 |
Conread position: | 4-224 |
Cow position: | chr28:16109462-16109684 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 157 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 143, 26 |
Conread position: | 5-189 |
Cow position: | chr28:18354795-18354608 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 5, 21 |
Conread position: | 5-207 |
Cow position: | chr28:10280593-10280797 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 149 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 138, 24 |
Conread position: | 5-216 |
Cow position: | chr28:28185309-28185525 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 156 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 142, 30 |
Conread position: | 5-217 |
Cow position: | chr28:3914220-3914434 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 159 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 141, 24 |
Conread position: | 9-179 |
Cow position: | chr28:7014196-7014022 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 138, 20 |
Conread position: | 9-181 |
Cow position: | chr28:25726893-25727071 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 135 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 20 |
Conread position: | 9-182 |
Cow position: | chr28:19393387-19393565 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 141 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 129, 20 |
Conread position: | 9-192 |
Cow position: | chr28:7981189-7981002 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 139 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 138, 20 |
Conread position: | 9-217 |
Cow position: | chr28:1316276-1316066 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 137, 21 |
Conread position: | 16-183 |
Cow position: | chr28:21867972-21868143 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 127 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 131, 13 |
Conread position: | 16-229 |
Cow position: | chr28:18790536-18790744 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 163 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 132, 13 |
Conread position: | 17-192 |
Cow position: | chr28:330036-329856 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 132 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 128, 9 |
Conread position: | 20-183 |
Cow position: | chr28:16346990-16346824 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 127, 14 |
Conread position: | 20-192 |
Cow position: | chr28:21129598-21129422 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 131 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 125, 9 |
Conread position: | 22-217 |
Cow position: | chr28:8972501-8972696 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 149 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 124, 7 |
Conread position: | 29-182 |
Cow position: | chr28:11585674-11585516 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 117, 29 |
Conread position: | 29-201 |
Cow position: | chr28:11047109-11047284 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 130 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 118, 29 |
Conread position: | 29-224 |
Cow position: | chr28:22500946-22500755 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 118, 29 |
Conread position: | 181-289 |
Cow position: | chr28:11752373-11752266 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 181-289 |
Cow position: | chr28:15063568-15063460 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 49, 105 |
Conread position: | 181-290 |
Cow position: | chr28:3751090-3751193 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 181-290 |
Cow position: | chr28:11585436-11585329 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 92 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 181-290 |
Cow position: | chr28:22345791-22345895 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 91 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 181-292 |
Cow position: | chr28:14742572-14742685 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 94 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 96, 107 |
Conread position: | 183-290 |
Cow position: | chr28:16211323-16211216 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 65, 101 |
Conread position: | 183-290 |
Cow position: | chr28:31841566-31841459 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 91 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 184-293 |
Cow position: | chr28:8629002-8628898 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.