Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 1-224
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 28

Conread position: 2-199
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 145, 27

Conread position: 2-224
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 27

Conread position: 3-140
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 78, 23

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 3-149
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 142, 26

Conread position: 3-161
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 27

Conread position: 3-175
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 55

Conread position: 3-180
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 3-181
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 142, 26

Conread position: 3-181
Cow position:
Alignm length: 186
Alignm identity: 137
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 142, 33

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 25

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-182
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 26

Conread position: 3-183
Cow position:
Alignm length: 194
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 14

Conread position: 3-188
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 9, 25

Conread position: 3-191
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 25

Conread position: 3-192
Cow position:
Alignm length: 198
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 109, 26

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-196
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 145, 26

Conread position: 3-196
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-200
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 27

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 27

Conread position: 3-201
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 27

Conread position: 3-202
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 26

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 26

Conread position: 3-202
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-207
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 3-207
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 23

Conread position: 3-207
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 26

Conread position: 3-217
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 26

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 140, 27

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 31

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 23

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 63, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 26

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 26

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 140, 21

Conread position: 3-217
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 24

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-218
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-218
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 56

Conread position: 3-218
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-220
Cow position:
Alignm length: 224
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 23

Conread position: 3-220
Cow position:
Alignm length: 225
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 55

Conread position: 3-222
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 26

Conread position: 3-222
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-222
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-225
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 144, 26

Conread position: 3-226
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 21

Conread position: 3-227
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 107, 26

Conread position: 3-229
Cow position:
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-237
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 0

Conread position: 3-278
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 47, 26

Conread position: 3-286
Cow position:
Alignm length: 295
Alignm identity: 199
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 48

Conread position: 4-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 25

Conread position: 4-192
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 25

Conread position: 4-201
Cow position:
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 25

Conread position: 4-224
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 144, 22

Conread position: 5-180
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 24

Conread position: 5-182
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 142, 24

Conread position: 5-192
Cow position:
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 142, 24

Conread position: 5-194
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 24

Conread position: 5-217
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 125, 24

Conread position: 5-217
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 142, 24

Conread position: 5-217
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 24

Conread position: 5-224
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 24

Conread position: 6-192
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 141, 23

Conread position: 6-207
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 23

Conread position: 7-217
Cow position:
Alignm length: 215
Alignm identity: 159
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 140, 22

Conread position: 9-188
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 143, 20

Conread position: 9-217
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 85

Conread position: 10-182
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 137, 19

Conread position: 11-182
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 136, 18

Conread position: 11-183
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 136, 18

Conread position: 11-224
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 136, 18

Conread position: 17-217
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 53, 12

Conread position: 17-217
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 13

Conread position: 19-201
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 10

Conread position: 20-182
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 127, 9

Conread position: 20-182
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 9

Conread position: 23-201
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 5, 38

Conread position: 29-145
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 29-217
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 29

Conread position: 34-217
Cow position:
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 24

Conread position: 36-224
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 29, 22

Conread position: 38-201
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 109, 20

Conread position: 52-201
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 39

Conread position: 181-289
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 181-289
Cow position:
Alignm length: 109
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 181-290
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 89, 108

Conread position: 181-293
Cow position:
Alignm length: 114
Alignm identity: 95
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 182-290
Cow position:
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 101, 0

Show alignments to all cow chromosomes.