Cow genome map

Conread name: rpigca0_010438.y1

Conread position: 1-143
Cow position:
Alignm length: 143
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 2-201
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 27

Conread position: 3-116
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 3-130
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-134
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 3-143
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 26

Conread position: 3-144
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-144
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 3-145
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 3-156
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 3-156
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 144, 13

Conread position: 3-175
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-178
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 141, 26

Conread position: 3-179
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 26

Conread position: 3-181
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 140, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 31

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 111, 26

Conread position: 3-182
Cow position:
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 112, 26

Conread position: 3-182
Cow position:
Alignm length: 191
Alignm identity: 140
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 27

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 143, 26

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 21

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 71, 27

Conread position: 3-182
Cow position:
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-182
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 144, 30

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 140, 26

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 144, 31

Conread position: 3-183
Cow position:
Alignm length: 188
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-183
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 75, 27

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-192
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 3-192
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 26

Conread position: 3-198
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-201
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 139, 26

Conread position: 3-201
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 142, 13

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 142, 26

Conread position: 3-201
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 143, 26

Conread position: 3-201
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 140, 26

Conread position: 3-203
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 24

Conread position: 3-207
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 13

Conread position: 3-207
Cow position:
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 26

Conread position: 3-207
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 26

Conread position: 3-216
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 114, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 108, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 139, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 143, 27

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 26

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 143, 26

Conread position: 3-217
Cow position:
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 143, 27

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 26

Conread position: 3-217
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 26

Conread position: 3-217
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 48

Conread position: 3-217
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 143, 26

Conread position: 3-218
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 3-220
Cow position:
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 26

Conread position: 3-222
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 27

Conread position: 3-222
Cow position:
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 107, 27

Conread position: 3-224
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 111, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 109, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 144, 26

Conread position: 3-224
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 142, 26

Conread position: 3-240
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 26

Conread position: 3-248
Cow position:
Alignm length: 256
Alignm identity: 176
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 107, 27

Conread position: 3-248
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 27

Conread position: 3-292
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 144, 26

Conread position: 4-182
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 25

Conread position: 4-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 143, 26

Conread position: 4-186
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 143, 25

Conread position: 4-192
Cow position:
Alignm length: 196
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 143, 25

Conread position: 4-199
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 25

Conread position: 4-199
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 25

Conread position: 4-201
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 143, 31

Conread position: 4-217
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 25

Conread position: 4-217
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 143, 25

Conread position: 5-145
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 24

Conread position: 5-182
Cow position:
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 24

Conread position: 9-182
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 20

Conread position: 9-217
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 17

Conread position: 9-229
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 105, 20

Conread position: 9-292
Cow position:
Alignm length: 305
Alignm identity: 227
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 39, 25

Conread position: 10-182
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 19

Conread position: 10-217
Cow position:
Alignm length: 215
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 135, 19

Conread position: 11-201
Cow position:
Alignm length: 200
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 19

Conread position: 11-201
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 23

Conread position: 11-230
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 18

Conread position: 12-182
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 18

Conread position: 12-217
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 17

Conread position: 16-192
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 44

Conread position: 17-217
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 129, 12

Conread position: 18-217
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 40, 11

Conread position: 20-217
Cow position:
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 9

Conread position: 21-217
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 124, 8

Conread position: 22-217
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 125, 7

Conread position: 28-217
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 5, 31

Conread position: 28-248
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 5, 30

Conread position: 29-217
Cow position:
Alignm length: 190
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 121, 29

Conread position: 30-182
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 28

Conread position: 30-222
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 33-182
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 112, 25

Conread position: 37-224
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 110, 50

Conread position: 168-290
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 72, 0

Conread position: 180-293
Cow position:
Alignm length: 114
Alignm identity: 96
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 181-277
Cow position:
Alignm length: 97
Alignm identity: 83
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 181-281
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 181-282
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 181-289
Cow position:
Alignm length: 109
Alignm identity: 92
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 104, 0

Conread position: 182-293
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.