Cow genome map
| Conread name: | rpigca0_010438.y1 |
| Conread position: | 1-143 |
| Cow position: | chr5:6839622-6839482 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 2-201 |
| Cow position: | chr5:26156441-26156240 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 145, 27 |
| Conread position: | 3-116 |
| Cow position: | chr5:39936655-39936764 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-130 |
| Cow position: | chr5:35180786-35180910 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-134 |
| Cow position: | chr5:5849126-5848998 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-143 |
| Cow position: | chr5:43437391-43437251 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 26 |
| Conread position: | 3-144 |
| Cow position: | chr5:31470046-31469908 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-144 |
| Cow position: | chr5:64524353-64524215 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr5:50483385-50483246 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-145 |
| Cow position: | chr5:56820790-56820930 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-156 |
| Cow position: | chr5:6576034-6575880 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-156 |
| Cow position: | chr5:35826129-35826283 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 144, 13 |
| Conread position: | 3-175 |
| Cow position: | chr5:18902095-18902271 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-178 |
| Cow position: | chr5:58855633-58855809 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 141, 26 |
| Conread position: | 3-179 |
| Cow position: | chr5:52289309-52289489 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-181 |
| Cow position: | chr5:6032523-6032705 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:4348159-4347978 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 3-182 |
| Cow position: | chr5:9390249-9390066 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:16894241-16894058 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:30302426-30302609 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:34638421-34638604 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:34915713-34915524 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:46080731-46080545 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:46130255-46130069 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:49820670-49820853 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:50645925-50645741 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 3-182 |
| Cow position: | chr5:54714214-54714031 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:54868946-54869128 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 3-182 |
| Cow position: | chr5:55820907-55821091 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 3-182 |
| Cow position: | chr5:56433121-56433298 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-182 |
| Cow position: | chr5:59268972-59269156 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:1766767-1766582 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:25231480-25231295 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:27154552-27154736 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:37645594-37645777 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 144, 30 |
| Conread position: | 3-183 |
| Cow position: | chr5:41546363-41546178 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:50599599-50599778 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 3-183 |
| Cow position: | chr5:53776010-53776194 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-183 |
| Cow position: | chr5:55233241-55233056 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 27 |
| Conread position: | 3-192 |
| Cow position: | chr5:12323267-12323073 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-192 |
| Cow position: | chr5:15363422-15363614 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-192 |
| Cow position: | chr5:45846164-45845972 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 3-198 |
| Cow position: | chr5:12315849-12316043 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:12352538-12352336 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:26467150-26467350 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:34464055-34463861 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 142, 13 |
| Conread position: | 3-201 |
| Cow position: | chr5:47343427-47343627 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:47704607-47704407 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 133, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:52165651-52165451 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-201 |
| Cow position: | chr5:63388276-63388476 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 3-203 |
| Cow position: | chr5:29827581-29827783 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 144, 24 |
| Conread position: | 3-207 |
| Cow position: | chr5:29903993-29903788 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 140, 13 |
| Conread position: | 3-207 |
| Cow position: | chr5:39299055-39299262 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-207 |
| Cow position: | chr5:55194982-55195190 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 26 |
| Conread position: | 3-216 |
| Cow position: | chr5:70290012-70290228 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 114, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:351305-351088 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:6044814-6045030 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:10261715-10261498 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:11834627-11834409 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:14630380-14630164 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:14904528-14904312 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 139, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:19470649-19470439 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 143, 27 |
| Conread position: | 3-217 |
| Cow position: | chr5:21828384-21828600 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:26096824-26097041 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:34506398-34506182 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:40532112-40531897 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:42727263-42727048 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 143, 27 |
| Conread position: | 3-217 |
| Cow position: | chr5:51151833-51151619 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:64759203-64758992 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:64823774-64823556 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-217 |
| Cow position: | chr5:70102277-70102061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 99, 48 |
| Conread position: | 3-217 |
| Cow position: | chr5:74644132-74643917 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 3-218 |
| Cow position: | chr5:60447775-60447989 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-220 |
| Cow position: | chr5:31634977-31635195 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 138, 26 |
| Conread position: | 3-222 |
| Cow position: | chr5:41951552-41951332 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 3-222 |
| Cow position: | chr5:43991812-43992044 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:1105332-1105109 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:16184620-16184843 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 3-224 |
| Cow position: | chr5:31661637-31661414 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 111, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:32088232-32088009 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:37377397-37377619 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:42673622-42673845 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:46708711-46708931 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-224 |
| Cow position: | chr5:53835223-53835445 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 26 |
| Conread position: | 3-240 |
| Cow position: | chr5:5826793-5826553 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 3-248 |
| Cow position: | chr5:26378140-26377890 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 107, 27 |
| Conread position: | 3-248 |
| Cow position: | chr5:54126611-54126857 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 143, 27 |
| Conread position: | 3-292 |
| Cow position: | chr5:6286816-6286524 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 144, 26 |
| Conread position: | 4-182 |
| Cow position: | chr5:12640700-12640518 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 25 |
| Conread position: | 4-182 |
| Cow position: | chr5:66366063-66366245 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 143, 26 |
| Conread position: | 4-186 |
| Cow position: | chr5:6129885-6130071 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 4-192 |
| Cow position: | chr5:5337674-5337482 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 4-199 |
| Cow position: | chr5:59779629-59779431 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 4-199 |
| Cow position: | chr5:59782230-59782032 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 141, 25 |
| Conread position: | 4-201 |
| Cow position: | chr5:4218412-4218609 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 143, 31 |
| Conread position: | 4-217 |
| Cow position: | chr5:5812555-5812340 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 144, 25 |
| Conread position: | 4-217 |
| Cow position: | chr5:62827225-62827011 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 143, 25 |
| Conread position: | 5-145 |
| Cow position: | chr5:54876134-54875996 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 5-182 |
| Cow position: | chr5:66816050-66815870 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 140, 24 |
| Conread position: | 9-182 |
| Cow position: | chr5:17027623-17027809 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 9-217 |
| Cow position: | chr5:57074782-57074573 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 9-229 |
| Cow position: | chr5:55756905-55756689 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 9-292 |
| Cow position: | chr5:69460937-69461234 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 25 |
| Conread position: | 10-182 |
| Cow position: | chr5:28229661-28229838 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 10-217 |
| Cow position: | chr5:51936696-51936905 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 135, 19 |
| Conread position: | 11-201 |
| Cow position: | chr5:3582113-3582307 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 19 |
| Conread position: | 11-201 |
| Cow position: | chr5:30486789-30486979 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 136, 23 |
| Conread position: | 11-230 |
| Cow position: | chr5:8821451-8821233 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 141, 18 |
| Conread position: | 12-182 |
| Cow position: | chr5:19969495-19969321 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 127, 18 |
| Conread position: | 12-217 |
| Cow position: | chr5:15722758-15722551 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 131, 17 |
| Conread position: | 16-192 |
| Cow position: | chr5:47601349-47601532 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 17-217 |
| Cow position: | chr5:41976301-41976101 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 18-217 |
| Cow position: | chr5:27010832-27011038 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 40, 11 |
| Conread position: | 20-217 |
| Cow position: | chr5:25926867-25926667 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 9 |
| Conread position: | 21-217 |
| Cow position: | chr5:34669524-34669326 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 124, 8 |
| Conread position: | 22-217 |
| Cow position: | chr5:38431611-38431809 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 28-217 |
| Cow position: | chr5:27172396-27172201 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 28-248 |
| Cow position: | chr5:37942238-37942016 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 29-217 |
| Cow position: | chr5:17087468-17087286 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 121, 29 |
| Conread position: | 30-182 |
| Cow position: | chr5:15598679-15598522 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 30-222 |
| Cow position: | chr5:39815716-39815535 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 33-182 |
| Cow position: | chr5:59758951-59759104 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 37-224 |
| Cow position: | chr5:49558723-49558913 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 168-290 |
| Cow position: | chr5:45803839-45803959 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 180-293 |
| Cow position: | chr5:6045078-6045190 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 181-277 |
| Cow position: | chr5:35683863-35683959 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-281 |
| Cow position: | chr5:58005035-58005135 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-282 |
| Cow position: | chr5:24933998-24934099 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 181-289 |
| Cow position: | chr5:35684726-35684833 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 182-293 |
| Cow position: | chr5:52000011-52000121 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
Show alignments to all cow chromosomes.