Cow genome map


           Conread name:
           rpigca0_014818.y1
        

               Conread position:
               20-471
               

               Cow position:
               chr17:8039200-8038742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               6, 124
               

               Conread position:
               32-471
               

               Cow position:
               chr17:38992564-38992118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 103
               

               Conread position:
               34-471
               

               Cow position:
               chr17:13726067-13725628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               134, 91
               

               Conread position:
               79-451
               

               Cow position:
               chr17:18851594-18851206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               89, 98
               

               Conread position:
               90-473
               

               Cow position:
               chr17:7802107-7802496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               188, 27
               

               Conread position:
               90-473
               

               Cow position:
               chr17:29833149-29833521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               131-430
               

               Cow position:
               chr17:30413668-30413358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               138-425
               

               Cow position:
               chr17:24334343-24334052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 9
               

               Conread position:
               138-470
               

               Cow position:
               chr17:16446775-16447114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               289-471
               

               Cow position:
               chr17:1312384-1312198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               21, 49
               
Show alignments to all cow chromosomes.