Cow genome map
| Conread name: | rpigca0_014818.y1 |
| Conread position: | 1-473 |
| Cow position: | chrX:27407687-27408163 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 82 |
| Conread position: | 14-233 |
| Cow position: | chrX:42084771-42084551 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 14-470 |
| Cow position: | chrX:19540586-19541034 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 149 |
| Conread position: | 20-471 |
| Cow position: | chrX:1331688-1331243 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 104 |
| Conread position: | 21-473 |
| Cow position: | chrX:9391089-9391550 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 265, 103 |
| Conread position: | 24-471 |
| Cow position: | chrX:17663161-17663618 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 105, 124 |
| Conread position: | 24-474 |
| Cow position: | chrX:6660262-6659826 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 28-471 |
| Cow position: | chrX:36250111-36250558 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 28-475 |
| Cow position: | chrX:13885712-13885272 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 31-450 |
| Cow position: | chrX:24950792-24951226 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 34-449 |
| Cow position: | chrX:11406425-11406007 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 34-474 |
| Cow position: | chrX:30151852-30152300 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 281 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 249, 111 |
| Conread position: | 38-470 |
| Cow position: | chrX:6835522-6835958 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 276 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 129, 86 |
| Conread position: | 47-471 |
| Cow position: | chrX:18769629-18769211 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 269 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 54-459 |
| Cow position: | chrX:18152534-18152947 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 274 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 5 |
| Conread position: | 61-474 |
| Cow position: | chrX:3210830-3211247 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 270 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 157, 60 |
| Conread position: | 79-449 |
| Cow position: | chrX:6193623-6194007 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 151 |
| Conread position: | 91-470 |
| Cow position: | chrX:14267516-14267903 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 116, 43 |
| Conread position: | 99-475 |
| Cow position: | chrX:1960898-1960513 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 69, 18 |
| Conread position: | 111-475 |
| Cow position: | chrX:23927516-23927887 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 234 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 187, 86 |
| Conread position: | 119-473 |
| Cow position: | chrX:25280179-25280522 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 190, 50 |
| Conread position: | 131-474 |
| Cow position: | chrX:4409210-4408859 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 67 |
| Conread position: | 135-471 |
| Cow position: | chrX:14781697-14782044 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 140-474 |
| Cow position: | chrX:12094945-12095290 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 5 |
| Conread position: | 155-474 |
| Cow position: | chrX:21625354-21625681 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 156-473 |
| Cow position: | chrX:21196646-21196321 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 132, 28 |
| Conread position: | 174-471 |
| Cow position: | chrX:7178258-7177965 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 34, 14 |
Show alignments to all cow chromosomes.