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Cow genome map

           
Conread name:
           
rpigca_0366.y1
        

               
Conread position:
               
1-241
               

               
Cow position:
               
chr22:47582643-47582876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr22:43743578-43743237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
273, 24
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr22:28351919-28351529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 127
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr22:11746169-11745873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
2-333
               

               
Cow position:
               
chr22:39472639-39472293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 104
               

               
Conread position:
               
2-370
               

               
Cow position:
               
chr22:590081-590448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr22:27274954-27274566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 105
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr22:26749311-26749033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr22:15568279-15567892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 156
               

               
Conread position:
               
5-288
               

               
Cow position:
               
chr22:19787938-19787655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr22:22155342-22155688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr22:26941539-26941872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
27, 102
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr22:7302104-7301750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 244
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr22:28058300-28057940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 47
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr22:26658796-26659162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr22:27581190-27581560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
5-391
               

               
Cow position:
               
chr22:38980648-38981017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr22:33448334-33447947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr22:38439417-38439016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
6-183
               

               
Cow position:
               
chr22:8357356-8357532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr22:23249970-23249788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr22:19714668-19714844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 99
               

               
Conread position:
               
6-185
               

               
Cow position:
               
chr22:28938164-28937978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
6-186
               

               
Cow position:
               
chr22:9278645-9278821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr22:34931006-34930811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr22:36761375-36761575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr22:11200785-11200984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
6-213
               

               
Cow position:
               
chr22:11987475-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr22:3730897-3730677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr22:47927503-47927718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr22:34665794-34666010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr22:1791731-1791962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr22:33949261-33949026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
28, 74
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr22:11038016-11038236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr22:30472788-30473018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr22:12569533-12569296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr22:11837459-11837232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
6-242
               

               
Cow position:
               
chr22:25658793-25658554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr22:1342481-1342713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr22:30117260-30117499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr22:2701970-2702212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
6-247
               

               
Cow position:
               
chr22:14601256-14601484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
6-252
               

               
Cow position:
               
chr22:30689373-30689622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 197
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr22:29091130-29090899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
226, 26
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr22:14237347-14237102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
6-262
               

               
Cow position:
               
chr22:26106800-26107055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr22:25341762-25342026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr22:45271321-45271595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr22:5042061-5042327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr22:35533613-35533338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr22:11500524-11500798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
6-287
               

               
Cow position:
               
chr22:852771-853042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr22:35520521-35520233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
26, 237
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr22:6202655-6202940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
6-289
               

               
Cow position:
               
chr22:18025815-18025534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr22:23865204-23865494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 230
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr22:6123153-6122879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr22:16057443-16057727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
6-291
               

               
Cow position:
               
chr22:26490203-26490496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr22:13210371-13210647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 144
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr22:44835384-44835676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr22:36569800-36569521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr22:41045172-41044879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr22:13011535-13011238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
21, 168
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr22:19653239-19652953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 36
               

               
Conread position:
               
6-314
               

               
Cow position:
               
chr22:14376651-14376360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr22:34597674-34597986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
76, 185
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr22:23741962-23741642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:26097871-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
6-323
               

               
Cow position:
               
chr22:39303264-39302938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr22:8418210-8418524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr22:14844316-14844633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr22:15337856-15338183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 232
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr22:28640410-28640081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr22:30818985-30818652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr22:16812421-16812092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr22:31213314-31213651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
36, 207
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr22:17993288-17992958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr22:46611039-46610707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 111
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:9520892-9521218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr22:15760098-15760437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr22:38313722-38313402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr22:7838347-7838667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
6-339
               

               
Cow position:
               
chr22:31593119-31592779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr22:7153631-7153961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:40720545-40720214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr22:34398713-34398374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:22160463-22160809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:23833038-23833379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:30954781-30955100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:43292160-43291819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 235
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr22:1484604-1484951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr22:3993352-3993699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr22:11257994-11257659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr22:11613170-11613521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr22:42605378-42605736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr22:21407950-21408332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 36
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr22:20626583-20626947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:5337856-5337490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:13670428-13670060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:23856790-23857156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:26141016-26141384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:26184418-26184051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 62
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:26316221-26316566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:34616051-34616416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 87
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:41244988-41245364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr22:45132908-45132539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
110, 89
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr22:13861330-13861688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr22:9977562-9977922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr22:645018-644655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr22:45845869-45846256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr22:3842368-3842734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr22:17152421-17152791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr22:37324289-37324658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
6-378
               

               
Cow position:
               
chr22:25743211-25742831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
6-379
               

               
Cow position:
               
chr22:38940207-38939822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr22:3251247-3250875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr22:15039444-15039063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 98
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr22:8481389-8481763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr22:14924982-14924613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 51
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr22:29955257-29954886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr22:40071711-40072096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 185
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:1279644-1279264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:1975354-1975730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:5282249-5282617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:21502478-21502865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:24734569-24734195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 114
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr22:34476258-34475877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr22:29641852-29642231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
6-384
               

               
Cow position:
               
chr22:46568147-46567772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:534235-534624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 234
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:8840329-8840730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:10420762-10421158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:12968327-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:24176132-24175771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr22:27480633-27481023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
38, 121
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:877265-877641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:6493916-6494287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:14179089-14178703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 216
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:21295982-21295599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 59
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:27171517-27171138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr22:35753564-35753179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr22:27223875-27224257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr22:42612200-42612586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr22:15950635-15950257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr22:23176709-23176312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 207
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr22:27577475-27577876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
25, 190
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr22:36539924-36539522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr22:2502580-2502957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr22:2623772-2623391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr22:9372262-9372650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:1590762-1591153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:8733580-8733207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:21746381-21746771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
22, 67
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:24611334-24610965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr22:36560914-36560525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:1651260-1651626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 56
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:2216566-2216942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:3949983-3950386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 246
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:5290586-5290984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:10339370-10338985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:14882369-14881981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:17813970-17814365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:26339501-26339889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:27329141-27328759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:34606335-34606721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr22:34750419-34750807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 114
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr22:34726416-34726800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr22:37029860-37029471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 116
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:1068173-1067778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:12572945-12573336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 271
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:14371909-14372306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:23181292-23180909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 97
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr22:27818745-27819132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 99
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr22:10161707-10162104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr22:4535584-4535189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr22:6215812-6215420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr22:11697467-11697055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr22:17764117-17764516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr22:21415376-21415753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr22:4356841-4357224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr22:38930772-38930366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 223
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:1326161-1326560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:3301580-3301197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 112
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:4061197-4060809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 16
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:4076156-4075746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 242
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:4119826-4119424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:4583312-4583700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:6622503-6622109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:8732819-8732421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:8882766-8883149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:9127148-9127546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:10302752-10303158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 239
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:11370849-11370451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 197
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:12682050-12681659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:13286185-13286587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 302
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:13688370-13687973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 305
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:13957908-13957506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:14091489-14091082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:15490401-15490794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:17852880-17852499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:18258970-18259355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:19340944-19341333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:21012132-21012524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:21890617-21890220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 179
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:22612853-22613241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:22861169-22860772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:23759270-23758873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 73
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:23805242-23804841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
20, 97
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:25246652-25247048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:26151376-26150977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 157
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:27322061-27322446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:30111239-30111641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:30514997-30515408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:31870505-31870116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
243, 26
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:34441893-34441493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:34894714-34895098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:40374348-40374745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:43397761-43398140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 100
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr22:45513778-45513385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
7-185
               

               
Cow position:
               
chr22:36193604-36193774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr22:38549538-38549740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
7-247
               

               
Cow position:
               
chr22:6566900-6566662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr22:27401288-27401542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 74
               

               
Conread position:
               
7-294
               

               
Cow position:
               
chr22:33415270-33414993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr22:36574854-36574552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
7-332
               

               
Cow position:
               
chr22:4645520-4645843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr22:3987255-3987590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
7-334
               

               
Cow position:
               
chr22:15919892-15919568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 218
               

               
Conread position:
               
7-335
               

               
Cow position:
               
chr22:28370689-28371014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr22:26134492-26134149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr22:845646-845986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
7-359
               

               
Cow position:
               
chr22:25361234-25361581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
7-384
               

               
Cow position:
               
chr22:1266192-1265800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 24
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr22:4563105-4563486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr22:24066492-24066108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr22:10920121-10919725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 240
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr22:30049830-30049440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 371
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr22:16251820-16251444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 24
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr22:32894946-32895349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 288
               

               
Conread position:
               
7-394
               

               
Cow position:
               
chr22:44180336-44180730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 113
               

               
Conread position:
               
7-399
               

               
Cow position:
               
chr22:38977592-38977981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr22:8412267-8412669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 223
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr22:10631118-10631528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr22:23806804-23806399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 129
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr22:40349097-40349480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 15
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr22:1710319-1710513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr22:44386654-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
8-216
               

               
Cow position:
               
chr22:39516927-39517134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr22:13017037-13016837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr22:1822130-1821875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
8-277
               

               
Cow position:
               
chr22:6360744-6360475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 99
               

               
Conread position:
               
8-279
               

               
Cow position:
               
chr22:28731430-28731690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 15
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr22:7913222-7913495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
8-316
               

               
Cow position:
               
chr22:6092898-6092600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
28, 86
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr22:911846-912163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr22:29013623-29013955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
8-343
               

               
Cow position:
               
chr22:34953544-34953895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr22:1309983-1309652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr22:32651251-32651577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr22:19048059-19047720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr22:13769227-13769586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr22:25943225-25943584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr22:31646238-31646601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 115
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr22:17295184-17294816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr22:10532240-10532623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 219
               

               
Conread position:
               
8-385
               

               
Cow position:
               
chr22:30269159-30269532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
8-386
               

               
Cow position:
               
chr22:8323992-8324361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
8-386
               

               
Cow position:
               
chr22:33485859-33485493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr22:4650925-4651303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr22:26786097-26786490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr22:3316873-3317252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr22:16044685-16044284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr22:3325325-3325722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 224
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr22:4017219-4017609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr22:18926095-18926496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr22:32480721-32480330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr22:37201601-37201985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr22:41971410-41971017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 24
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr22:4990427-4990029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 213
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr22:18196254-18196651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr22:32661260-32661653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
148, 15
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr22:44717455-44717859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr22:21905239-21905417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
9-277
               

               
Cow position:
               
chr22:28179588-28179869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr22:3960549-3960252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 253
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr22:30963876-30964203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
9-345
               

               
Cow position:
               
chr22:22997223-22997559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr22:42946308-42945935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 25
               

               
Conread position:
               
9-385
               

               
Cow position:
               
chr22:18838000-18838380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
9-394
               

               
Cow position:
               
chr22:8116337-8115956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
9-394
               

               
Cow position:
               
chr22:27431938-27431573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr22:21567748-21568134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr22:27173140-27172738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 62
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr22:28146429-28146821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr22:8063579-8063337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
21, 109
               

               
Conread position:
               
10-267
               

               
Cow position:
               
chr22:9734601-9734856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
10-335
               

               
Cow position:
               
chr22:30483658-30483988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 223
               

               
Conread position:
               
10-371
               

               
Cow position:
               
chr22:2627322-2627690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
10-377
               

               
Cow position:
               
chr22:28665015-28665398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 233
               

               
Conread position:
               
10-384
               

               
Cow position:
               
chr22:30698926-30699302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr22:14691227-14690840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr22:14143360-14142985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr22:9251266-9251043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
11-296
               

               
Cow position:
               
chr22:30710149-30710435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
11-370
               

               
Cow position:
               
chr22:24509913-24509555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 63
               

               
Conread position:
               
11-387
               

               
Cow position:
               
chr22:40048310-40048678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
11-394
               

               
Cow position:
               
chr22:16620920-16621315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 225
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr22:6754508-6754124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr22:15960024-15959635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 55
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr22:40121132-40120734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
12-297
               

               
Cow position:
               
chr22:295189-294902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
12-337
               

               
Cow position:
               
chr22:47741165-47741495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr22:12946418-12946085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr22:6710027-6709651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
13-371
               

               
Cow position:
               
chr22:17950208-17949862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
14-296
               

               
Cow position:
               
chr22:27291851-27292121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr22:41271241-41270966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
14-371
               

               
Cow position:
               
chr22:34712464-34712835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
14-394
               

               
Cow position:
               
chr22:3964935-3965320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
15-385
               

               
Cow position:
               
chr22:3253185-3252836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 72
               

               
Conread position:
               
15-399
               

               
Cow position:
               
chr22:42684650-42685020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
16-377
               

               
Cow position:
               
chr22:7851711-7852081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 197
               

               
Conread position:
               
16-387
               

               
Cow position:
               
chr22:10323658-10324006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
16-400
               

               
Cow position:
               
chr22:25222149-25221764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr22:19376463-19376663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
18-241
               

               
Cow position:
               
chr22:41417382-41417165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 170
               

               
Conread position:
               
19-212
               

               
Cow position:
               
chr22:8303093-8302905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
132, 26
               

               
Conread position:
               
19-325
               

               
Cow position:
               
chr22:27550111-27550416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
19-362
               

               
Cow position:
               
chr22:4161857-4161521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
19-394
               

               
Cow position:
               
chr22:13840893-13841270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 103
               

               
Conread position:
               
19-400
               

               
Cow position:
               
chr22:11130627-11131008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr22:12777827-12777581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
20-325
               

               
Cow position:
               
chr22:10983099-10983413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 161
               

               
Conread position:
               
20-400
               

               
Cow position:
               
chr22:10567935-10567578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
21-241
               

               
Cow position:
               
chr22:2141571-2141784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
21-399
               

               
Cow position:
               
chr22:4108980-4108590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
21-400
               

               
Cow position:
               
chr22:28356792-28357169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 190
               

               
Conread position:
               
22-295
               

               
Cow position:
               
chr22:22145986-22146263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 215
               

               
Conread position:
               
22-400
               

               
Cow position:
               
chr22:47555604-47555988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 73
               

               
Conread position:
               
23-314
               

               
Cow position:
               
chr22:1640549-1640248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 105
               

               
Conread position:
               
23-381
               

               
Cow position:
               
chr22:23403882-23403521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
24-400
               

               
Cow position:
               
chr22:44410484-44410855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
25-180
               

               
Cow position:
               
chr22:41980319-41980163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr22:4026371-4026573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr22:20687056-20687280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
120, 93
               

               
Conread position:
               
25-260
               

               
Cow position:
               
chr22:32952241-32952471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
175, 80
               

               
Conread position:
               
25-281
               

               
Cow position:
               
chr22:37554863-37554604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
108, 140
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr22:25630008-25629734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 219
               

               
Conread position:
               
25-331
               

               
Cow position:
               
chr22:18021256-18020964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
25-345
               

               
Cow position:
               
chr22:25714773-25715088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
25-356
               

               
Cow position:
               
chr22:2010562-2010884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 56
               

               
Conread position:
               
25-371
               

               
Cow position:
               
chr22:7164717-7165073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
25-375
               

               
Cow position:
               
chr22:5384418-5384765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
25-377
               

               
Cow position:
               
chr22:5467606-5467237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
25-385
               

               
Cow position:
               
chr22:20862986-20862632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr22:16532843-16533214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr22:43812655-43812302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr22:34986338-34986157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
102, 52
               

               
Conread position:
               
26-359
               

               
Cow position:
               
chr22:10314841-10315173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
27-351
               

               
Cow position:
               
chr22:14118739-14119064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 299
               

               
Conread position:
               
27-394
               

               
Cow position:
               
chr22:25237376-25237008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 79
               

               
Conread position:
               
27-398
               

               
Cow position:
               
chr22:22222957-22223321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 96
               

               
Conread position:
               
28-399
               

               
Cow position:
               
chr22:27825603-27825981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 9
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr22:12974626-12974418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
29-296
               

               
Cow position:
               
chr22:10585934-10585673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 74
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr22:41898680-41898310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
30-333
               

               
Cow position:
               
chr22:30113834-30114146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 145
               

               
Conread position:
               
30-337
               

               
Cow position:
               
chr22:15153777-15154076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
121, 7
               

               
Conread position:
               
30-345
               

               
Cow position:
               
chr22:5622950-5622634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
98, 12
               

               
Conread position:
               
30-371
               

               
Cow position:
               
chr22:26166848-26166514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
32-220
               

               
Cow position:
               
chr22:22147840-22148033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 140
               

               
Conread position:
               
32-294
               

               
Cow position:
               
chr22:3064444-3064184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
34-241
               

               
Cow position:
               
chr22:66211-66411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
187, 87
               

               
Conread position:
               
34-400
               

               
Cow position:
               
chr22:1289747-1289391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
38-382
               

               
Cow position:
               
chr22:5616075-5616421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 190
               

               
Conread position:
               
39-279
               

               
Cow position:
               
chr22:14002255-14002479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
212, 51
               

               
Conread position:
               
39-373
               

               
Cow position:
               
chr22:10632692-10633026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 169
               

               
Conread position:
               
40-241
               

               
Cow position:
               
chr22:33918121-33917921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
40-323
               

               
Cow position:
               
chr22:15665993-15666269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
40-359
               

               
Cow position:
               
chr22:13300187-13300508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
41-333
               

               
Cow position:
               
chr22:15068204-15068498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
92, 58
               

               
Conread position:
               
41-336
               

               
Cow position:
               
chr22:13849671-13849379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
42-283
               

               
Cow position:
               
chr22:1727659-1727891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
42-400
               

               
Cow position:
               
chr22:6149606-6149249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 149
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr22:17339982-17339843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
43-270
               

               
Cow position:
               
chr22:10403715-10403497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr22:3944956-3945141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
47-279
               

               
Cow position:
               
chr22:10362838-10363081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
6, 200
               

               
Conread position:
               
47-400
               

               
Cow position:
               
chr22:17126240-17126586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
49-336
               

               
Cow position:
               
chr22:10598184-10598459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 51
               

               
Conread position:
               
50-345
               

               
Cow position:
               
chr22:23581048-23580763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
50-386
               

               
Cow position:
               
chr22:12313207-12313548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 172
               

               
Conread position:
               
52-276
               

               
Cow position:
               
chr22:27512373-27512145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
93, 44
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr22:2945881-2945707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
54-251
               

               
Cow position:
               
chr22:1081295-1081490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
46, 39
               

               
Conread position:
               
54-285
               

               
Cow position:
               
chr22:4974628-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
54-359
               

               
Cow position:
               
chr22:17125374-17125679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 49
               

               
Conread position:
               
56-295
               

               
Cow position:
               
chr22:1601977-1602216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
57-336
               

               
Cow position:
               
chr22:5675377-5675107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
57-387
               

               
Cow position:
               
chr22:41853691-41854032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
73, 39
               

               
Conread position:
               
58-391
               

               
Cow position:
               
chr22:30998693-30999015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
59-337
               

               
Cow position:
               
chr22:23689410-23689129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
59-347
               

               
Cow position:
               
chr22:11458621-11458903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
60-316
               

               
Cow position:
               
chr22:10678187-10677937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chr22:27047601-27047289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
67, 34
               

               
Conread position:
               
61-396
               

               
Cow position:
               
chr22:14378885-14378557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 126
               

               
Conread position:
               
64-377
               

               
Cow position:
               
chr22:2523764-2524080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr22:3533749-3534059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
65-386
               

               
Cow position:
               
chr22:22907996-22908310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
66-290
               

               
Cow position:
               
chr22:18120566-18120342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
66-337
               

               
Cow position:
               
chr22:12800467-12800746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
66-394
               

               
Cow position:
               
chr22:21530547-21530225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
66-399
               

               
Cow position:
               
chr22:16053116-16053447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
66-400
               

               
Cow position:
               
chr22:12315615-12315946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
67-244
               

               
Cow position:
               
chr22:7252843-7252664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
67-371
               

               
Cow position:
               
chr22:23122221-23121892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 304
               

               
Conread position:
               
67-400
               

               
Cow position:
               
chr22:1848869-1849214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 36
               

               
Conread position:
               
67-400
               

               
Cow position:
               
chr22:15025299-15024970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
73-343
               

               
Cow position:
               
chr22:33386697-33386429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
55, 97
               

               
Conread position:
               
74-350
               

               
Cow position:
               
chr22:10981198-10981472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
74-371
               

               
Cow position:
               
chr22:1563442-1563143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
58, 127
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr22:36433158-36432832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 54
               

               
Conread position:
               
75-239
               

               
Cow position:
               
chr22:3541907-3541749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 28
               

               
Conread position:
               
76-362
               

               
Cow position:
               
chr22:16292107-16291824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 35
               

               
Conread position:
               
79-324
               

               
Cow position:
               
chr22:16822921-16823162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 8
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr22:26123509-26123355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
62, 5
               

               
Conread position:
               
83-400
               

               
Cow position:
               
chr22:12388908-12389241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 158
               

               
Conread position:
               
84-242
               

               
Cow position:
               
chr22:25764666-25764508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
48, 138
               

               
Conread position:
               
84-337
               

               
Cow position:
               
chr22:26041417-26041677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
85-337
               

               
Cow position:
               
chr22:17132591-17132335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
88-366
               

               
Cow position:
               
chr22:9283776-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
90-400
               

               
Cow position:
               
chr22:8090701-8090396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
91-257
               

               
Cow position:
               
chr22:23119983-23120151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr22:3367017-3367258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 23
               

               
Conread position:
               
91-396
               

               
Cow position:
               
chr22:32698585-32698894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
91-400
               

               
Cow position:
               
chr22:6097198-6096877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
92-400
               

               
Cow position:
               
chr22:30818037-30818348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
40, 82
               

               
Conread position:
               
94-359
               

               
Cow position:
               
chr22:14638652-14638380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
95-380
               

               
Cow position:
               
chr22:22553405-22553141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
95-386
               

               
Cow position:
               
chr22:26969611-26969914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
98-337
               

               
Cow position:
               
chr22:9668397-9668651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
99-277
               

               
Cow position:
               
chr22:11497026-11497212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
100-380
               

               
Cow position:
               
chr22:27740722-27741010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 140
               

               
Conread position:
               
102-389
               

               
Cow position:
               
chr22:24628814-24628533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 128
               

               
Conread position:
               
103-336
               

               
Cow position:
               
chr22:3241859-3241629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 18
               

               
Conread position:
               
103-393
               

               
Cow position:
               
chr22:27729891-27730171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
104-384
               

               
Cow position:
               
chr22:12929438-12929159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
105-400
               

               
Cow position:
               
chr22:43131709-43131415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr22:139464-139192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr22:33399641-33399350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
107-344
               

               
Cow position:
               
chr22:15618455-15618686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
107-344
               

               
Cow position:
               
chr22:37030678-37030435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
107-345
               

               
Cow position:
               
chr22:9466450-9466692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
109-323
               

               
Cow position:
               
chr22:1874536-1874754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
109-348
               

               
Cow position:
               
chr22:10292805-10293037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 139
               

               
Conread position:
               
110-359
               

               
Cow position:
               
chr22:2912738-2912493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 91
               

               
Conread position:
               
110-371
               

               
Cow position:
               
chr22:3282973-3282717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
111-282
               

               
Cow position:
               
chr22:15020557-15020382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
111-325
               

               
Cow position:
               
chr22:3566021-3566233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
116-386
               

               
Cow position:
               
chr22:1983707-1983976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
118-370
               

               
Cow position:
               
chr22:6936120-6936365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
119-371
               

               
Cow position:
               
chr22:1035965-1035704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 237
               

               
Conread position:
               
122-399
               

               
Cow position:
               
chr22:27828240-27828514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
122-400
               

               
Cow position:
               
chr22:31599307-31599571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
123-366
               

               
Cow position:
               
chr22:10669608-10669369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
130, 38
               

               
Conread position:
               
127-316
               

               
Cow position:
               
chr22:34631999-34632189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
130-286
               

               
Cow position:
               
chr22:26506859-26506704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
98, 32
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr22:17193252-17193465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr22:27835395-27835616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
130-380
               

               
Cow position:
               
chr22:15668609-15668358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 163
               

               
Conread position:
               
130-380
               

               
Cow position:
               
chr22:21325869-21325616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
130-386
               

               
Cow position:
               
chr22:25539856-25540125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr22:1540773-1541029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
130-394
               

               
Cow position:
               
chr22:40789434-40789697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
130-396
               

               
Cow position:
               
chr22:16095036-16094771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
125, 52
               

               
Conread position:
               
130-400
               

               
Cow position:
               
chr22:11767185-11766909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
130-400
               

               
Cow position:
               
chr22:27681580-27681863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
131-400
               

               
Cow position:
               
chr22:530711-530439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
132-390
               

               
Cow position:
               
chr22:31153823-31154081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr22:17224797-17224530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
132-400
               

               
Cow position:
               
chr22:39602146-39602424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 47
               

               
Conread position:
               
133-337
               

               
Cow position:
               
chr22:2123162-2123367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
134-348
               

               
Cow position:
               
chr22:34735737-34735950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
101, 37
               

               
Conread position:
               
137-400
               

               
Cow position:
               
chr22:616993-617264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
138-391
               

               
Cow position:
               
chr22:34104802-34104541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
139-359
               

               
Cow position:
               
chr22:18293886-18293668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
140-318
               

               
Cow position:
               
chr22:14835342-14835170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
143-348
               

               
Cow position:
               
chr22:12527247-12527037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
143-400
               

               
Cow position:
               
chr22:10609232-10609498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
89, 98
               

               
Conread position:
               
144-297
               

               
Cow position:
               
chr22:21264171-21264326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
144-299
               

               
Cow position:
               
chr22:45578843-45578999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 83
               

               
Conread position:
               
144-337
               

               
Cow position:
               
chr22:27619608-27619809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
144-369
               

               
Cow position:
               
chr22:4011063-4011290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 75
               

               
Conread position:
               
144-377
               

               
Cow position:
               
chr22:12341074-12341311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr22:5837147-5837400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 95
               

               
Conread position:
               
144-400
               

               
Cow position:
               
chr22:43237528-43237268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
145-375
               

               
Cow position:
               
chr22:1911550-1911779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 21
               

               
Conread position:
               
147-369
               

               
Cow position:
               
chr22:13094280-13094500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
147-386
               

               
Cow position:
               
chr22:15915160-15914927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
110, 87
               

               
Conread position:
               
148-400
               

               
Cow position:
               
chr22:42617879-42618137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 80
               

               
Conread position:
               
149-390
               

               
Cow position:
               
chr22:12829727-12829483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
149-400
               

               
Cow position:
               
chr22:12892482-12892222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
150-400
               

               
Cow position:
               
chr22:6852698-6852443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
149, 84
               

               
Conread position:
               
150-400
               

               
Cow position:
               
chr22:8800571-8800313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 156
               

               
Conread position:
               
152-371
               

               
Cow position:
               
chr22:1870988-1871208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr22:26017845-26017631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 35
               

               
Conread position:
               
154-398
               

               
Cow position:
               
chr22:37947612-37947857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
97, 188
               

               
Conread position:
               
154-400
               

               
Cow position:
               
chr22:23736122-23735873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 31
               

               
Conread position:
               
155-316
               

               
Cow position:
               
chr22:4135508-4135670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
157-400
               

               
Cow position:
               
chr22:39215724-39215473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
159-371
               

               
Cow position:
               
chr22:13222006-13222227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
162-385
               

               
Cow position:
               
chr22:9597683-9597455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
74, 79
               

               
Conread position:
               
165-384
               

               
Cow position:
               
chr22:26074822-26075045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
168-400
               

               
Cow position:
               
chr22:25254078-25254313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
170-400
               

               
Cow position:
               
chr22:18933816-18933572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
171-346
               

               
Cow position:
               
chr22:5928055-5927875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 155
               

               
Conread position:
               
171-399
               

               
Cow position:
               
chr22:24915743-24915977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
172-386
               

               
Cow position:
               
chr22:23750986-23750771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
172-398
               

               
Cow position:
               
chr22:24903496-24903728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
173-400
               

               
Cow position:
               
chr22:27275372-27275604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
174-378
               

               
Cow position:
               
chr22:24336436-24336643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr22:34618705-34618929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
174-400
               

               
Cow position:
               
chr22:17652342-17652571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 207
               

               
Conread position:
               
175-348
               

               
Cow position:
               
chr22:3544046-3544223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
175-386
               

               
Cow position:
               
chr22:10285876-10286094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
175-390
               

               
Cow position:
               
chr22:14006091-14006307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
175-395
               

               
Cow position:
               
chr22:1659072-1659296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
176-400
               

               
Cow position:
               
chr22:25690370-25690139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
54, 186
               

               
Conread position:
               
177-344
               

               
Cow position:
               
chr22:28290031-28290200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
177-391
               

               
Cow position:
               
chr22:26122809-26123027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
75, 65
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr22:21235523-21235297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
179-390
               

               
Cow position:
               
chr22:12749985-12749773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
61, 25
               

               
Conread position:
               
179-400
               

               
Cow position:
               
chr22:12678506-12678282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
180-386
               

               
Cow position:
               
chr22:10553770-10553559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
183-345
               

               
Cow position:
               
chr22:29344796-29344961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
185-381
               

               
Cow position:
               
chr22:8287111-8287304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
186-359
               

               
Cow position:
               
chr22:13735094-13734923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
187-385
               

               
Cow position:
               
chr22:45506083-45505880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
187-398
               

               
Cow position:
               
chr22:10533515-10533730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 107
               

               
Conread position:
               
187-400
               

               
Cow position:
               
chr22:9171327-9171546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 208
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr22:14754927-14755121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
192-381
               

               
Cow position:
               
chr22:35029192-35029389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 135
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr22:7832419-7832232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
192-397
               

               
Cow position:
               
chr22:29185681-29185473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
193-359
               

               
Cow position:
               
chr22:28704112-28704281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
193-394
               

               
Cow position:
               
chr22:13878112-13878309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
100, 45
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr22:6176361-6176145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
200-377
               

               
Cow position:
               
chr22:28672079-28672261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr22:15737167-15737372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 181
               

               
Conread position:
               
204-371
               

               
Cow position:
               
chr22:2076070-2075902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 35
               

               
Conread position:
               
204-400
               

               
Cow position:
               
chr22:23265717-23265510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
210-400
               

               
Cow position:
               
chr22:47525694-47525888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
219-386
               

               
Cow position:
               
chr22:12188528-12188357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 165
               

               
Conread position:
               
219-398
               

               
Cow position:
               
chr22:12195615-12195431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
220-380
               

               
Cow position:
               
chr22:14381611-14381779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
222-400
               

               
Cow position:
               
chr22:12902892-12902717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
222-400
               

               
Cow position:
               
chr22:33985844-33985669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
223-371
               

               
Cow position:
               
chr22:3945337-3945477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
225-378
               

               
Cow position:
               
chr22:1838264-1838424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 146
               

               
Conread position:
               
232-377
               

               
Cow position:
               
chr22:11344475-11344624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
234-390
               

               
Cow position:
               
chr22:7074353-7074506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
234-400
               

               
Cow position:
               
chr22:18967191-18967019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr22:4156849-4156677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
238-386
               

               
Cow position:
               
chr22:6326415-6326568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
238-391
               

               
Cow position:
               
chr22:47562674-47562835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
251-390
               

               
Cow position:
               
chr22:3239897-3240036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
271-394
               

               
Cow position:
               
chr22:35533227-35533100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               
Show alignments to all cow chromosomes.