• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rpigca_0366.y1
        

               
Conread position:
               
2-334
               

               
Cow position:
               
chr24:11005378-11005725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
5, 50
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr24:19769215-19769551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr24:6450231-6450585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 88
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr24:6677222-6677449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr24:27941288-27941070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr24:29027769-29028044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
123, 27
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr24:32759050-32758700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 285
               

               
Conread position:
               
5-385
               

               
Cow position:
               
chr24:28721608-28721986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr24:27748374-27748742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 27
               

               
Conread position:
               
5-395
               

               
Cow position:
               
chr24:40849884-40850267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr24:7913718-7914127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr24:43028606-43028210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 150
               

               
Conread position:
               
6-189
               

               
Cow position:
               
chr24:2730849-2730666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr24:6914043-6913836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr24:21252729-21252518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr24:20970071-20969862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr24:3631238-3631447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr24:27543755-27543538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr24:6900545-6900770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr24:27809902-27810136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr24:27720031-27719804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr24:14746358-14746590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr24:44702699-44702931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr24:17567111-17567345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr24:39493017-39493253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr24:20862235-20861971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr24:24137130-24136872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr24:16625780-16625488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr24:42007467-42007738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 119
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr24:34315079-34315355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr24:39219125-39218839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 100
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr24:43635156-43635439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 176
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr24:35795019-35794728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 188
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr24:37386619-37386338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr24:18405583-18405302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 26
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr24:39955325-39955042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
24, 174
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr24:7917646-7917352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 236
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr24:23685340-23685057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-296
               

               
Cow position:
               
chr24:28028984-28028699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr24:21768363-21768654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr24:27874323-27874605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
27, 111
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr24:591631-591913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
6-304
               

               
Cow position:
               
chr24:27052771-27052476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
6-320
               

               
Cow position:
               
chr24:20024328-20024650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 222
               

               
Conread position:
               
6-322
               

               
Cow position:
               
chr24:27633134-27633442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
6-325
               

               
Cow position:
               
chr24:10671105-10671438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
25, 211
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr24:37650391-37650722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr24:18974922-18975258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr24:27341303-27340970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 168
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr24:25991424-25991130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
129, 27
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr24:29180622-29180937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr24:40300876-40301212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr24:25320710-25321039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr24:35332440-35332779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr24:38814692-38815021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr24:39440837-39440514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr24:44808965-44809304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 238
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr24:33230386-33230733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
26, 254
               

               
Conread position:
               
6-344
               

               
Cow position:
               
chr24:24311222-24311562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr24:6508042-6507709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 94
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr24:14337455-14337790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr24:39681576-39681913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr24:15508813-15508480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr24:41985697-41986059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 219
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr24:31324009-31324358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
6-357
               

               
Cow position:
               
chr24:32693423-32693793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr24:27726283-27725936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 84
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr24:32370190-32369839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr24:34272523-34272886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
6-362
               

               
Cow position:
               
chr24:43364084-43364437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr24:20225458-20225825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 202
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr24:29388971-29389323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 16
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr24:33153503-33153865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr24:43200553-43200187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr24:8886637-8886999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr24:25677755-25678115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr24:28319481-28319117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr24:34369285-34368915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 159
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr24:814544-814174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr24:15057124-15057490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr24:15246915-15246547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr24:24250453-24250818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr24:32823061-32822679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr24:23616416-23616793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr24:29170686-29171059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr24:27844799-27844424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr24:29781883-29782264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr24:31811906-31812292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr24:43683735-43683359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr24:18331457-18331825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr24:29596090-29595703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr24:29679591-29679208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 181
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr24:39905737-39905352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr24:25424784-25425134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
26, 122
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr24:34564849-34565224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr24:35150251-35150624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr24:24491293-24490909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr24:27906149-27906545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 176
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr24:31159349-31159722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr24:25885437-25885049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr24:27290598-27290981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr24:29063925-29063550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr24:29673240-29673630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr24:5754562-5754944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr24:20874397-20874790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 321
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr24:35073813-35074192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr24:35675264-35675641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr24:40129846-40130240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 31
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr24:3430456-3430838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
6-393
               

               
Cow position:
               
chr24:3493614-3493996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:201912-201525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:11119001-11119388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:12851454-12851816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:14648614-14648246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:16556910-16556533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:18970771-18970396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr24:28690421-28690793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr24:19658268-19658652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 224
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr24:20942898-20943274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 26
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr24:30235599-30235986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr24:28496867-28496467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 209
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr24:17407114-17407508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr24:18741850-18741454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr24:38347400-38347793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:2402653-2402253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 31
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:3165542-3165938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:11839900-11840304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:17104846-17104451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 96
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:17860530-17860144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:18485279-18484875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:19466212-19465797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:19535523-19535135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:28303627-28303244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:28553823-28553451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:30229187-30229592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:30484222-30483826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 88
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:31816306-31816695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 181
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:32054392-32054771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:33098767-33098354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:33944128-33944524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:34742470-34742874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:42103097-42103483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr24:44041289-44040893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
7-179
               

               
Cow position:
               
chr24:22193447-22193624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr24:11006937-11007151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr24:28332550-28332318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
112, 25
               

               
Conread position:
               
7-279
               

               
Cow position:
               
chr24:40184344-40184616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
7-283
               

               
Cow position:
               
chr24:36555106-36554837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 35
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr24:37246496-37246213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
24, 218
               

               
Conread position:
               
7-336
               

               
Cow position:
               
chr24:3152854-3152525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr24:28600132-28599806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 68
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr24:35568911-35569239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
165, 123
               

               
Conread position:
               
7-350
               

               
Cow position:
               
chr24:2675053-2675382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 92
               

               
Conread position:
               
7-370
               

               
Cow position:
               
chr24:40592443-40592805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr24:43432524-43432883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
7-378
               

               
Cow position:
               
chr24:16268381-16268034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 81
               

               
Conread position:
               
7-383
               

               
Cow position:
               
chr24:18732401-18731999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr24:13626970-13626724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
8-245
               

               
Cow position:
               
chr24:6340740-6340971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
8-260
               

               
Cow position:
               
chr24:6161124-6160873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
8-261
               

               
Cow position:
               
chr24:40908739-40908994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
8-272
               

               
Cow position:
               
chr24:6154547-6154797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
8-297
               

               
Cow position:
               
chr24:15473078-15473368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 217
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr24:18734637-18734324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
8-332
               

               
Cow position:
               
chr24:211704-212036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
8-333
               

               
Cow position:
               
chr24:30545133-30544816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
8-338
               

               
Cow position:
               
chr24:30860360-30860691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr24:36404424-36404083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr24:23824688-23824360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
220, 7
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr24:13626012-13626372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr24:17294464-17294091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr24:28062668-28063063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 206
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr24:30314313-30313911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 211
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr24:44987651-44987254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr24:18324339-18324559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
10-334
               

               
Cow position:
               
chr24:42345284-42344946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
10-359
               

               
Cow position:
               
chr24:41755591-41755938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 22
               

               
Conread position:
               
10-370
               

               
Cow position:
               
chr24:43370973-43371332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
10-400
               

               
Cow position:
               
chr24:15861876-15861473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
11-284
               

               
Cow position:
               
chr24:17363919-17363651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
11-394
               

               
Cow position:
               
chr24:18390562-18390188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
11-400
               

               
Cow position:
               
chr24:27267360-27267732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 80
               

               
Conread position:
               
12-263
               

               
Cow position:
               
chr24:21860493-21860246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
24, 88
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr24:17955720-17955345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 5
               

               
Conread position:
               
13-344
               

               
Cow position:
               
chr24:41980934-41980600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
14-379
               

               
Cow position:
               
chr24:39483202-39483572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 211
               

               
Conread position:
               
14-384
               

               
Cow position:
               
chr24:24755184-24755546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
15-400
               

               
Cow position:
               
chr24:16994624-16994996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
16-394
               

               
Cow position:
               
chr24:32205063-32204682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 97
               

               
Conread position:
               
17-261
               

               
Cow position:
               
chr24:5151967-5152210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
17-292
               

               
Cow position:
               
chr24:40091839-40091571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
19-255
               

               
Cow position:
               
chr24:40055988-40055763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
19-400
               

               
Cow position:
               
chr24:27149135-27149504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
20-400
               

               
Cow position:
               
chr24:11886894-11887274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
21-359
               

               
Cow position:
               
chr24:18374510-18374844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 188
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr24:21264773-21264562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
22-390
               

               
Cow position:
               
chr24:32124903-32124535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 62
               

               
Conread position:
               
22-400
               

               
Cow position:
               
chr24:27608359-27607993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 71
               

               
Conread position:
               
23-238
               

               
Cow position:
               
chr24:17938496-17938713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
24-386
               

               
Cow position:
               
chr24:33372291-33372654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
25-296
               

               
Cow position:
               
chr24:2970865-2970596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
25-323
               

               
Cow position:
               
chr24:23442839-23442541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 48
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr24:28349327-28349669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 76
               

               
Conread position:
               
25-378
               

               
Cow position:
               
chr24:33724109-33723748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr24:27039780-27040168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr24:30776923-30776732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
100, 78
               

               
Conread position:
               
29-369
               

               
Cow position:
               
chr24:26732193-26732536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 47
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr24:27207448-27207214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
98, 65
               

               
Conread position:
               
30-394
               

               
Cow position:
               
chr24:41068015-41068376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
56, 74
               

               
Conread position:
               
33-317
               

               
Cow position:
               
chr24:6487670-6487950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
33-376
               

               
Cow position:
               
chr24:27824214-27824557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr24:27054154-27054473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
37-386
               

               
Cow position:
               
chr24:2096135-2095780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
39-387
               

               
Cow position:
               
chr24:10498966-10499321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 137
               

               
Conread position:
               
44-374
               

               
Cow position:
               
chr24:11457094-11456749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
45-394
               

               
Cow position:
               
chr24:33222178-33221831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
47-325
               

               
Cow position:
               
chr24:18343812-18344105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
47-337
               

               
Cow position:
               
chr24:19179681-19179384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
49-376
               

               
Cow position:
               
chr24:34396407-34396085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
49-398
               

               
Cow position:
               
chr24:34008815-34008456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 19
               

               
Conread position:
               
50-327
               

               
Cow position:
               
chr24:31036123-31036392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 44
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr24:20250136-20249842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 173
               

               
Conread position:
               
52-289
               

               
Cow position:
               
chr24:27781723-27781973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 47
               

               
Conread position:
               
52-386
               

               
Cow position:
               
chr24:34410426-34410744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
186, 44
               

               
Conread position:
               
53-262
               

               
Cow position:
               
chr24:31382678-31382876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
179, 42
               

               
Conread position:
               
53-337
               

               
Cow position:
               
chr24:27299941-27300212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
54-332
               

               
Cow position:
               
chr24:18771416-18771131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
54-386
               

               
Cow position:
               
chr24:28327312-28326979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
56-385
               

               
Cow position:
               
chr24:24457474-24457147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 35
               

               
Conread position:
               
57-232
               

               
Cow position:
               
chr24:31388308-31388478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
57-296
               

               
Cow position:
               
chr24:21918444-21918219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
57-299
               

               
Cow position:
               
chr24:10841442-10841194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 28
               

               
Conread position:
               
57-317
               

               
Cow position:
               
chr24:10012546-10012786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 42
               

               
Conread position:
               
57-332
               

               
Cow position:
               
chr24:10518329-10518605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 70
               

               
Conread position:
               
59-391
               

               
Cow position:
               
chr24:21519215-21519537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
60-400
               

               
Cow position:
               
chr24:31359099-31359436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
61-390
               

               
Cow position:
               
chr24:6102600-6102936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
61-400
               

               
Cow position:
               
chr24:29540133-29539812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 178
               

               
Conread position:
               
64-374
               

               
Cow position:
               
chr24:12263923-12263621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
64-400
               

               
Cow position:
               
chr24:16509753-16510090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
65-398
               

               
Cow position:
               
chr24:33465819-33465507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
66-296
               

               
Cow position:
               
chr24:39833733-39833506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
66-330
               

               
Cow position:
               
chr24:39842070-39841802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 246
               

               
Conread position:
               
68-332
               

               
Cow position:
               
chr24:5633252-5632982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
59, 172
               

               
Conread position:
               
68-394
               

               
Cow position:
               
chr24:15373194-15373516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
68-399
               

               
Cow position:
               
chr24:16645537-16645201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
70-322
               

               
Cow position:
               
chr24:5911-5666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
70-371
               

               
Cow position:
               
chr24:10125648-10125960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 263
               

               
Conread position:
               
71-400
               

               
Cow position:
               
chr24:20801556-20801227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
72-296
               

               
Cow position:
               
chr24:28253495-28253716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 31
               

               
Conread position:
               
73-296
               

               
Cow position:
               
chr24:11914896-11915117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
75-339
               

               
Cow position:
               
chr24:18787127-18786865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
75-400
               

               
Cow position:
               
chr24:352813-352486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 21
               

               
Conread position:
               
76-350
               

               
Cow position:
               
chr24:15707650-15707378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
56, 27
               

               
Conread position:
               
76-400
               

               
Cow position:
               
chr24:28990358-28990680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 50
               

               
Conread position:
               
79-325
               

               
Cow position:
               
chr24:39143400-39143654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
53, 145
               

               
Conread position:
               
80-272
               

               
Cow position:
               
chr24:29708007-29707809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
80-289
               

               
Cow position:
               
chr24:34782990-34782786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 23
               

               
Conread position:
               
80-381
               

               
Cow position:
               
chr24:6132080-6131775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
81-400
               

               
Cow position:
               
chr24:16089030-16089350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
84-395
               

               
Cow position:
               
chr24:22647545-22647228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
86-288
               

               
Cow position:
               
chr24:19633872-19634074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
86-322
               

               
Cow position:
               
chr24:2111608-2111369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
42, 15
               

               
Conread position:
               
88-282
               

               
Cow position:
               
chr24:27202397-27202595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
90-336
               

               
Cow position:
               
chr24:30897735-30897483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr24:17434415-17434672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
92-280
               

               
Cow position:
               
chr24:885878-885695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
92-285
               

               
Cow position:
               
chr24:27552701-27552892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
92-398
               

               
Cow position:
               
chr24:14171889-14171581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 262
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr24:18355030-18355270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
99-362
               

               
Cow position:
               
chr24:41423421-41423682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
100-263
               

               
Cow position:
               
chr24:30226753-30226916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
100-263
               

               
Cow position:
               
chr24:40983976-40984139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 135
               

               
Conread position:
               
100-332
               

               
Cow position:
               
chr24:27220278-27220041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 134
               

               
Conread position:
               
100-394
               

               
Cow position:
               
chr24:21606848-21606568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
101-400
               

               
Cow position:
               
chr24:17833000-17832702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
103-385
               

               
Cow position:
               
chr24:32070782-32071063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
103-400
               

               
Cow position:
               
chr24:19800662-19800957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 87
               

               
Conread position:
               
106-345
               

               
Cow position:
               
chr24:37945815-37945568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
106-383
               

               
Cow position:
               
chr24:16895617-16895335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr24:18999866-19000161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr24:19186781-19187050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
107-371
               

               
Cow position:
               
chr24:36801205-36801464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
107-385
               

               
Cow position:
               
chr24:10299903-10300180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr24:29586813-29587119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
110-315
               

               
Cow position:
               
chr24:14103411-14103618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
110-400
               

               
Cow position:
               
chr24:12200590-12200288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 245
               

               
Conread position:
               
110-400
               

               
Cow position:
               
chr24:18357230-18356935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 63
               

               
Conread position:
               
111-344
               

               
Cow position:
               
chr24:19611834-19612067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
111-348
               

               
Cow position:
               
chr24:37037723-37037967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
113-366
               

               
Cow position:
               
chr24:19736502-19736251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
115-345
               

               
Cow position:
               
chr24:23187089-23186857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
118-399
               

               
Cow position:
               
chr24:35576704-35576418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
120-287
               

               
Cow position:
               
chr24:25524881-25525041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 5
               

               
Conread position:
               
122-381
               

               
Cow position:
               
chr24:38841568-38841324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
130-296
               

               
Cow position:
               
chr24:26455683-26455851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
130-325
               

               
Cow position:
               
chr24:27630247-27630441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
169, 107
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr24:31258494-31258277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
130-347
               

               
Cow position:
               
chr24:17127368-17127593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 62
               

               
Conread position:
               
130-386
               

               
Cow position:
               
chr24:28289404-28289147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
130-391
               

               
Cow position:
               
chr24:5683122-5683389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
130-394
               

               
Cow position:
               
chr24:7777772-7777518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
130-394
               

               
Cow position:
               
chr24:8006155-8006419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
166, 66
               

               
Conread position:
               
130-399
               

               
Cow position:
               
chr24:26554757-26554477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr24:4724818-4725029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr24:18314104-18313820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
5, 20
               

               
Conread position:
               
133-267
               

               
Cow position:
               
chr24:28023633-28023766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
133-387
               

               
Cow position:
               
chr24:17752266-17752009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
164, 239
               

               
Conread position:
               
135-393
               

               
Cow position:
               
chr24:34390147-34390390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
229, 14
               

               
Conread position:
               
135-400
               

               
Cow position:
               
chr24:37395359-37395094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
139-337
               

               
Cow position:
               
chr24:36008338-36008540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
139-394
               

               
Cow position:
               
chr24:32739419-32739159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
142-396
               

               
Cow position:
               
chr24:38006849-38006602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr24:24662272-24662016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
112, 29
               

               
Conread position:
               
144-392
               

               
Cow position:
               
chr24:28233907-28234152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
107, 66
               

               
Conread position:
               
145-400
               

               
Cow position:
               
chr24:389960-390218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
145-400
               

               
Cow position:
               
chr24:14550657-14550910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
146-400
               

               
Cow position:
               
chr24:36711061-36711315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
153, 80
               

               
Conread position:
               
149-385
               

               
Cow position:
               
chr24:27713541-27713301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 33
               

               
Conread position:
               
149-389
               

               
Cow position:
               
chr24:23863771-23863519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
151-348
               

               
Cow position:
               
chr24:24061945-24061739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
42, 164
               

               
Conread position:
               
154-376
               

               
Cow position:
               
chr24:27418230-27418011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
154-386
               

               
Cow position:
               
chr24:29606175-29605929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
156-339
               

               
Cow position:
               
chr24:40837647-40837828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 76
               

               
Conread position:
               
156-400
               

               
Cow position:
               
chr24:26880636-26880873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
143, 56
               

               
Conread position:
               
158-336
               

               
Cow position:
               
chr24:32194380-32194565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
159-371
               

               
Cow position:
               
chr24:29561701-29561484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
159-397
               

               
Cow position:
               
chr24:14457850-14457610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
160-400
               

               
Cow position:
               
chr24:39523573-39523332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
161-342
               

               
Cow position:
               
chr24:6957382-6957555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
161-394
               

               
Cow position:
               
chr24:39791414-39791653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
167-394
               

               
Cow position:
               
chr24:41405778-41406007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 61
               

               
Conread position:
               
167-400
               

               
Cow position:
               
chr24:880510-880740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 119
               

               
Conread position:
               
168-342
               

               
Cow position:
               
chr24:35467323-35467154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
49, 100
               

               
Conread position:
               
171-390
               

               
Cow position:
               
chr24:18368784-18368564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
181, 76
               

               
Conread position:
               
171-400
               

               
Cow position:
               
chr24:37975096-37974866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
84, 29
               

               
Conread position:
               
172-359
               

               
Cow position:
               
chr24:43832409-43832604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
172-373
               

               
Cow position:
               
chr24:16895244-16895048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
175-326
               

               
Cow position:
               
chr24:27900617-27900774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
180-381
               

               
Cow position:
               
chr24:18614893-18615100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
182-391
               

               
Cow position:
               
chr24:230172-230391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 206
               

               
Conread position:
               
183-333
               

               
Cow position:
               
chr24:16259344-16259189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
5, 101
               

               
Conread position:
               
183-345
               

               
Cow position:
               
chr24:21894945-21895111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
183-394
               

               
Cow position:
               
chr24:30308660-30308439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
183-399
               

               
Cow position:
               
chr24:28342247-28342478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr24:34496016-34496197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
192-377
               

               
Cow position:
               
chr24:7046842-7046656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
192-387
               

               
Cow position:
               
chr24:28042878-28043079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
43, 27
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr24:15288726-15288945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr24:28600533-28600317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
45, 207
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr24:37823434-37823642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
192-400
               

               
Cow position:
               
chr24:39911131-39910913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
193-400
               

               
Cow position:
               
chr24:20364503-20364297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
195-400
               

               
Cow position:
               
chr24:27349271-27349054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
197-391
               

               
Cow position:
               
chr24:40389518-40389717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 44
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr24:6151705-6151905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
161, 37
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr24:22999925-23000112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 182
               

               
Conread position:
               
200-398
               

               
Cow position:
               
chr24:27284734-27284932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr24:2992964-2992762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
205-400
               

               
Cow position:
               
chr24:14551387-14551578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
116, 47
               

               
Conread position:
               
209-400
               

               
Cow position:
               
chr24:27202013-27202203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
216-384
               

               
Cow position:
               
chr24:11007388-11007556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
220-389
               

               
Cow position:
               
chr24:20969734-20969557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
226-400
               

               
Cow position:
               
chr24:23667181-23667007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
5, 140
               

               
Conread position:
               
231-359
               

               
Cow position:
               
chr24:7390390-7390261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
234-387
               

               
Cow position:
               
chr24:40404862-40404708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 104
               

               
Conread position:
               
235-400
               

               
Cow position:
               
chr24:28355739-28355577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
238-394
               

               
Cow position:
               
chr24:28470730-28470567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
250-400
               

               
Cow position:
               
chr24:32891081-32890929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
254-394
               

               
Cow position:
               
chr24:42981792-42981648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
44, 0
               
Show alignments to all cow chromosomes.