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Cow genome map

           
Conread name:
           
rpigca_0366.y1
        

               
Conread position:
               
1-371
               

               
Cow position:
               
chr27:15925551-15925189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr27:13198130-13197808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 156
               

               
Conread position:
               
5-297
               

               
Cow position:
               
chr27:30814614-30814335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
227, 28
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr27:22603375-22603029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr27:19543697-19544079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr27:26135372-26134993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr27:28001610-28001987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
5-398
               

               
Cow position:
               
chr27:30765244-30764849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
6-187
               

               
Cow position:
               
chr27:9978038-9977847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-198
               

               
Cow position:
               
chr27:26436663-26436861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr27:16620202-16619991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr27:29400028-29399805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr27:6620357-6620132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr27:30177363-30177589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr27:30417885-30417666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr27:13409957-13410187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 214
               

               
Conread position:
               
6-238
               

               
Cow position:
               
chr27:16263540-16263322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr27:12231699-12231935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
6-241
               

               
Cow position:
               
chr27:15858880-15859112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr27:26398048-26398302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 123
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr27:1183665-1183941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 63
               

               
Conread position:
               
6-279
               

               
Cow position:
               
chr27:28038126-28038399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 235
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr27:8291799-8292062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
14, 100
               

               
Conread position:
               
6-282
               

               
Cow position:
               
chr27:16871708-16871978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 26
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr27:14902438-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 227
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr27:6523257-6522973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
6-292
               

               
Cow position:
               
chr27:27259819-27259541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr27:11255724-11255451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
6-293
               

               
Cow position:
               
chr27:27040820-27040528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr27:2682932-2683223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
25, 111
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr27:11412927-11412650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-297
               

               
Cow position:
               
chr27:23070149-23070437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 125
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr27:18544209-18543912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr27:24999523-24999851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 233
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr27:9090590-9090902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr27:28018548-28018226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
6-328
               

               
Cow position:
               
chr27:26224058-26224382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
6-329
               

               
Cow position:
               
chr27:21350804-21351135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 124
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr27:12429619-12429292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
6-331
               

               
Cow position:
               
chr27:2901030-2901379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 236
               

               
Conread position:
               
6-332
               

               
Cow position:
               
chr27:11081407-11081084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
26, 44
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr27:2930385-2930707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr27:16787038-16786710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 185
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr27:22426619-22426951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
6-334
               

               
Cow position:
               
chr27:26163589-26163288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr27:11435122-11435442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr27:27737720-27738046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
6-335
               

               
Cow position:
               
chr27:30354134-30354464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 90
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr27:707158-706832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 73
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr27:27843781-27844123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr27:21408341-21408685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:8430228-8430568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 127
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:21139036-21138701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:26427917-26428262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 215
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:26440847-26441177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 9
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:30868529-30868870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 144
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr27:26508950-26509284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 26
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr27:23472469-23472122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr27:25998916-25998567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 146
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr27:435447-435101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr27:1123232-1122888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr27:20549481-20549855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 194
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr27:20553928-20553588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr27:24014530-24014883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
6-359
               

               
Cow position:
               
chr27:26785769-26786134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
6-365
               

               
Cow position:
               
chr27:28190006-28190350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 99
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr27:30890498-30890143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr27:26581235-26581592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
20, 80
               

               
Conread position:
               
6-370
               

               
Cow position:
               
chr27:27234232-27233862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:536668-536308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:7212511-7212870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:8062147-8062506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 120
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:18507843-18507493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:21452859-21453251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 377
               

               
Conread position:
               
6-371
               

               
Cow position:
               
chr27:21977926-21978295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
6-372
               

               
Cow position:
               
chr27:20636870-20637217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
6-375
               

               
Cow position:
               
chr27:12246871-12246493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
6-376
               

               
Cow position:
               
chr27:24445945-24446308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
6-377
               

               
Cow position:
               
chr27:21393293-21393670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr27:4673232-4672844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr27:22035162-22035548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr27:27038633-27039007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
6-385
               

               
Cow position:
               
chr27:30359606-30359235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr27:1290657-1291021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr27:2957619-2957241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 193
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr27:4385854-4386234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
6-386
               

               
Cow position:
               
chr27:24738590-24738970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr27:2592752-2592370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 75
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr27:14670171-14670555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 219
               

               
Conread position:
               
6-387
               

               
Cow position:
               
chr27:30406820-30407210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
6-388
               

               
Cow position:
               
chr27:23882163-23882542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
6-389
               

               
Cow position:
               
chr27:13006043-13005675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr27:1353794-1353408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr27:23930175-23929794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr27:25809312-25809692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr27:6550662-6550288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr27:23452691-23452288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 257
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr27:27064229-27064617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr27:27683906-27684293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 237
               

               
Conread position:
               
6-391
               

               
Cow position:
               
chr27:29831477-29831881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 33
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr27:12516410-12516013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr27:815576-815176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 86
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr27:19718131-19717732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
6-394
               

               
Cow position:
               
chr27:22723495-22723873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
6-395
               

               
Cow position:
               
chr27:27640781-27641190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 329
               

               
Conread position:
               
6-396
               

               
Cow position:
               
chr27:30582949-30582555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 97
               

               
Conread position:
               
6-397
               

               
Cow position:
               
chr27:18558575-18558179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 131
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr27:7934952-7935342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr27:10980075-10979676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 166
               

               
Conread position:
               
6-398
               

               
Cow position:
               
chr27:26413044-26413436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr27:299172-299561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr27:13638781-13639172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr27:23632811-23632415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr27:27388817-27389212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:1768424-1768808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:4390043-4390445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:6541836-6541449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:7412594-7412208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 186
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:8962058-8962429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:15454424-15454026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:17397238-17397637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:22171509-22171116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:22220765-22220364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:22418555-22418950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 130
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:24227582-24227982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:24331937-24331532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:26959409-26959800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:27019889-27020286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:28921685-28922081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr27:28931576-28931988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr27:22498763-22498546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
7-276
               

               
Cow position:
               
chr27:31147463-31147726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
21, 79
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr27:25791014-25790746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
7-281
               

               
Cow position:
               
chr27:6058712-6058441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
7-293
               

               
Cow position:
               
chr27:26142004-26141696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-297
               

               
Cow position:
               
chr27:31372769-31373061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr27:20369249-20368948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr27:20641136-20641457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr27:16284682-16284351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 191
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr27:19577884-19577551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
7-347
               

               
Cow position:
               
chr27:1058470-1058810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 168
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr27:20283841-20283468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr27:15315699-15315336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 12
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr27:19661153-19660742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr27:26919703-26920101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr27:28518495-28518107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
8-214
               

               
Cow position:
               
chr27:22179588-22179788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr27:11762530-11762735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr27:23454937-23455169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr27:15204022-15204339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr27:30362452-30362142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
8-330
               

               
Cow position:
               
chr27:25380200-25379873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr27:29977467-29977129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr27:4805697-4806031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr27:4812668-4813013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr27:6500274-6499917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 217
               

               
Conread position:
               
8-367
               

               
Cow position:
               
chr27:16478139-16478489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr27:1636735-1637092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
8-371
               

               
Cow position:
               
chr27:7958626-7958985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
8-386
               

               
Cow position:
               
chr27:23483432-23483055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr27:22454570-22454951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr27:17473022-17472632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr27:4835398-4835789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
8-398
               

               
Cow position:
               
chr27:19388228-19387835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 210
               

               
Conread position:
               
8-399
               

               
Cow position:
               
chr27:15871371-15870974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
22, 79
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr27:8629665-8630060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr27:13411149-13411552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 98
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr27:26239233-26238838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
9-279
               

               
Cow position:
               
chr27:16238104-16237849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
9-296
               

               
Cow position:
               
chr27:25471349-25471062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 165
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr27:8942475-8942848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
9-399
               

               
Cow position:
               
chr27:23128663-23128280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
9-400
               

               
Cow position:
               
chr27:12596964-12596596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr27:18593475-18593143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
10-386
               

               
Cow position:
               
chr27:25277342-25276971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
11-255
               

               
Cow position:
               
chr27:18215262-18215018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 182
               

               
Conread position:
               
11-371
               

               
Cow position:
               
chr27:19647738-19648099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 23
               

               
Conread position:
               
11-385
               

               
Cow position:
               
chr27:26807357-26807736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr27:4664675-4664324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
20, 89
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr27:20354785-20354414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 78
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr27:26424382-26424762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
13-275
               

               
Cow position:
               
chr27:29251084-29250824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 176
               

               
Conread position:
               
14-224
               

               
Cow position:
               
chr27:27055781-27055568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
14-383
               

               
Cow position:
               
chr27:19546301-19546680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
14-387
               

               
Cow position:
               
chr27:26999221-26999591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr27:27245149-27245540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
14-400
               

               
Cow position:
               
chr27:15866426-15866033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
14-400
               

               
Cow position:
               
chr27:19685511-19685898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr27:24027174-24026977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
15-371
               

               
Cow position:
               
chr27:27003079-27003415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
15-392
               

               
Cow position:
               
chr27:26433610-26433984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
18-290
               

               
Cow position:
               
chr27:21569644-21569911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
18-319
               

               
Cow position:
               
chr27:18030860-18031179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
19-295
               

               
Cow position:
               
chr27:8570840-8571117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
19-297
               

               
Cow position:
               
chr27:732768-732497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
19-393
               

               
Cow position:
               
chr27:13875930-13875556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
19-400
               

               
Cow position:
               
chr27:30915200-30914821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 82
               

               
Conread position:
               
20-400
               

               
Cow position:
               
chr27:427170-426784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 195
               

               
Conread position:
               
20-400
               

               
Cow position:
               
chr27:23554122-23554515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
21-398
               

               
Cow position:
               
chr27:15867587-15867209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr27:20592175-20591954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 75
               

               
Conread position:
               
25-244
               

               
Cow position:
               
chr27:18195558-18195336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 102
               

               
Conread position:
               
25-337
               

               
Cow position:
               
chr27:11296448-11296148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
228, 107
               

               
Conread position:
               
25-345
               

               
Cow position:
               
chr27:14937238-14937559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
145, 80
               

               
Conread position:
               
25-359
               

               
Cow position:
               
chr27:26151210-26150874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 74
               

               
Conread position:
               
25-370
               

               
Cow position:
               
chr27:20036938-20037270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
25-390
               

               
Cow position:
               
chr27:27554496-27554852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
25-400
               

               
Cow position:
               
chr27:16705437-16705067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 62
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr27:18739577-18739255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 70
               

               
Conread position:
               
27-231
               

               
Cow position:
               
chr27:31499256-31499050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 69
               

               
Conread position:
               
27-250
               

               
Cow position:
               
chr27:24357455-24357225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 222
               

               
Conread position:
               
29-189
               

               
Cow position:
               
chr27:30989657-30989816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 101
               

               
Conread position:
               
29-390
               

               
Cow position:
               
chr27:13252196-13251840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 180
               

               
Conread position:
               
29-394
               

               
Cow position:
               
chr27:30988984-30988617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 95
               

               
Conread position:
               
30-368
               

               
Cow position:
               
chr27:10992539-10992203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
30-375
               

               
Cow position:
               
chr27:8353662-8353319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 150
               

               
Conread position:
               
33-283
               

               
Cow position:
               
chr27:27550565-27550798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
37-327
               

               
Cow position:
               
chr27:4066-3785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 94
               

               
Conread position:
               
41-394
               

               
Cow position:
               
chr27:9169470-9169819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 65
               

               
Conread position:
               
42-350
               

               
Cow position:
               
chr27:6160155-6159847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 31
               

               
Conread position:
               
44-376
               

               
Cow position:
               
chr27:15408872-15409199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
44-399
               

               
Cow position:
               
chr27:22513503-22513866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
101, 86
               

               
Conread position:
               
47-279
               

               
Cow position:
               
chr27:22268673-22268441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 194
               

               
Conread position:
               
49-359
               

               
Cow position:
               
chr27:23891105-23890794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr27:27438338-27438694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 33
               

               
Conread position:
               
51-380
               

               
Cow position:
               
chr27:4944364-4944680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
175, 71
               

               
Conread position:
               
52-238
               

               
Cow position:
               
chr27:18434307-18434489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
31, 136
               

               
Conread position:
               
52-344
               

               
Cow position:
               
chr27:23662441-23662721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
52-379
               

               
Cow position:
               
chr27:24477580-24477251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 147
               

               
Conread position:
               
52-394
               

               
Cow position:
               
chr27:26426372-26426034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
80, 149
               

               
Conread position:
               
53-384
               

               
Cow position:
               
chr27:30871897-30872225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
54-334
               

               
Cow position:
               
chr27:7346822-7346555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
54-371
               

               
Cow position:
               
chr27:29431622-29431312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
54-394
               

               
Cow position:
               
chr27:15643337-15642992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 183
               

               
Conread position:
               
55-391
               

               
Cow position:
               
chr27:27270377-27270719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 74
               

               
Conread position:
               
56-398
               

               
Cow position:
               
chr27:16781024-16780683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 76
               

               
Conread position:
               
56-400
               

               
Cow position:
               
chr27:11480470-11480824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
57-231
               

               
Cow position:
               
chr27:20118559-20118392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
64-189
               

               
Cow position:
               
chr27:28008905-28009032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
64-377
               

               
Cow position:
               
chr27:14343316-14343613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
65-394
               

               
Cow position:
               
chr27:7731098-7731432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
68, 36
               

               
Conread position:
               
65-400
               

               
Cow position:
               
chr27:23545178-23545513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
66-344
               

               
Cow position:
               
chr27:28270997-28271279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
66-400
               

               
Cow position:
               
chr27:26489752-26490091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 317
               

               
Conread position:
               
67-359
               

               
Cow position:
               
chr27:715652-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
68-342
               

               
Cow position:
               
chr27:3306921-3306648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 59
               

               
Conread position:
               
68-394
               

               
Cow position:
               
chr27:28467291-28467631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr27:20247658-20247921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 30
               

               
Conread position:
               
71-296
               

               
Cow position:
               
chr27:29816477-29816697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
72-293
               

               
Cow position:
               
chr27:7537929-7538151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
72-400
               

               
Cow position:
               
chr27:26481074-26481382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
73-394
               

               
Cow position:
               
chr27:16589570-16589881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
74-383
               

               
Cow position:
               
chr27:17331644-17331335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 167
               

               
Conread position:
               
75-320
               

               
Cow position:
               
chr27:20789239-20789484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
86-332
               

               
Cow position:
               
chr27:19500099-19500350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
88-400
               

               
Cow position:
               
chr27:16103936-16103625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 41
               

               
Conread position:
               
89-376
               

               
Cow position:
               
chr27:29184709-29184997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 145
               

               
Conread position:
               
90-387
               

               
Cow position:
               
chr27:8168300-8168604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
91-276
               

               
Cow position:
               
chr27:4011807-4011622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 146
               

               
Conread position:
               
91-386
               

               
Cow position:
               
chr27:22569898-22569614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
92-280
               

               
Cow position:
               
chr27:10395134-10395320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
95-395
               

               
Cow position:
               
chr27:20748886-20749191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
99-371
               

               
Cow position:
               
chr27:30389176-30389454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
99-391
               

               
Cow position:
               
chr27:29236697-29236388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
100-335
               

               
Cow position:
               
chr27:7614969-7615200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
100-336
               

               
Cow position:
               
chr27:27442051-27442290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
103-341
               

               
Cow position:
               
chr27:20101484-20101244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
105-325
               

               
Cow position:
               
chr27:11151790-11151559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
106-298
               

               
Cow position:
               
chr27:6350716-6350918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
106-383
               

               
Cow position:
               
chr27:28245914-28245634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
106-389
               

               
Cow position:
               
chr27:30672450-30672730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
106-400
               

               
Cow position:
               
chr27:30260782-30261081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
107-339
               

               
Cow position:
               
chr27:12424808-12425040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
107-400
               

               
Cow position:
               
chr27:26226178-26226474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
108-381
               

               
Cow position:
               
chr27:31148871-31148596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
109-387
               

               
Cow position:
               
chr27:27694662-27694940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 118
               

               
Conread position:
               
110-334
               

               
Cow position:
               
chr27:16626006-16625781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
141, 110
               

               
Conread position:
               
110-379
               

               
Cow position:
               
chr27:29380967-29380689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
110-398
               

               
Cow position:
               
chr27:2643978-2644274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
111-294
               

               
Cow position:
               
chr27:13274046-13274230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr27:2847960-2847694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 69
               

               
Conread position:
               
113-285
               

               
Cow position:
               
chr27:20570228-20570053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr27:4858540-4858768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
113-360
               

               
Cow position:
               
chr27:12191383-12191623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
113-400
               

               
Cow position:
               
chr27:23594422-23594133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
115-359
               

               
Cow position:
               
chr27:20497318-20497062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
115-381
               

               
Cow position:
               
chr27:22386974-22386711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
13, 125
               

               
Conread position:
               
117-394
               

               
Cow position:
               
chr27:15378378-15378658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
112, 15
               

               
Conread position:
               
120-339
               

               
Cow position:
               
chr27:23736061-23735843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 103
               

               
Conread position:
               
127-372
               

               
Cow position:
               
chr27:673953-674188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr27:26087385-26087131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 104
               

               
Conread position:
               
130-272
               

               
Cow position:
               
chr27:4482769-4482909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr27:20078955-20078746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr27:8263246-8263467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr27:20092750-20092978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr27:26188910-26188673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
130-376
               

               
Cow position:
               
chr27:29504559-29504809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
130-386
               

               
Cow position:
               
chr27:22559733-22559996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
130-397
               

               
Cow position:
               
chr27:23511078-23510798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
98, 185
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr27:15865691-15865424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
139-290
               

               
Cow position:
               
chr27:18491927-18491769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
140-371
               

               
Cow position:
               
chr27:19083641-19083873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
140-387
               

               
Cow position:
               
chr27:590687-590935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
140-400
               

               
Cow position:
               
chr27:6925167-6924896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
97, 214
               

               
Conread position:
               
141-299
               

               
Cow position:
               
chr27:26979630-26979792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
143-385
               

               
Cow position:
               
chr27:24939979-24939718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
144-238
               

               
Cow position:
               
chr27:17103077-17102983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
144-387
               

               
Cow position:
               
chr27:15215307-15215053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 124
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr27:16088883-16088619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
85, 96
               

               
Conread position:
               
146-325
               

               
Cow position:
               
chr27:20055898-20056078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
146-400
               

               
Cow position:
               
chr27:16965645-16965389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 67
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr27:22225526-22225722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 71
               

               
Conread position:
               
150-326
               

               
Cow position:
               
chr27:20085632-20085451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr27:26111841-26112102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
150-400
               

               
Cow position:
               
chr27:20514889-20514634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
154-389
               

               
Cow position:
               
chr27:26407101-26407335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
144, 79
               

               
Conread position:
               
154-392
               

               
Cow position:
               
chr27:7974238-7973997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
157-339
               

               
Cow position:
               
chr27:21976110-21975929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
157-345
               

               
Cow position:
               
chr27:8405764-8405952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
157-384
               

               
Cow position:
               
chr27:17646112-17646337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
157-384
               

               
Cow position:
               
chr27:20812966-20812736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
157-390
               

               
Cow position:
               
chr27:1558597-1558823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 19
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr27:31017773-31018010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 43
               

               
Conread position:
               
160-391
               

               
Cow position:
               
chr27:4156060-4155820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
163-298
               

               
Cow position:
               
chr27:24113257-24113119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
163-308
               

               
Cow position:
               
chr27:68258-68113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
90, 64
               

               
Conread position:
               
166-290
               

               
Cow position:
               
chr27:4486572-4486696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
166-394
               

               
Cow position:
               
chr27:23860221-23859987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
17, 179
               

               
Conread position:
               
169-395
               

               
Cow position:
               
chr27:6302412-6302651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
169-400
               

               
Cow position:
               
chr27:5553514-5553281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
170-380
               

               
Cow position:
               
chr27:20803609-20803827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
171-364
               

               
Cow position:
               
chr27:11356491-11356686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 157
               

               
Conread position:
               
171-400
               

               
Cow position:
               
chr27:23107854-23108088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
173-400
               

               
Cow position:
               
chr27:23485258-23485028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
62, 206
               

               
Conread position:
               
174-399
               

               
Cow position:
               
chr27:1190431-1190661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr27:29593585-29593816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
176-344
               

               
Cow position:
               
chr27:10653728-10653556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 63
               

               
Conread position:
               
176-384
               

               
Cow position:
               
chr27:17918273-17918486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
178-398
               

               
Cow position:
               
chr27:22423548-22423330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
179-400
               

               
Cow position:
               
chr27:213003-212765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
179-400
               

               
Cow position:
               
chr27:13940520-13940742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
183-398
               

               
Cow position:
               
chr27:14303769-14303556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
183-398
               

               
Cow position:
               
chr27:23559995-23560213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
187-400
               

               
Cow position:
               
chr27:19933096-19932880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
111, 75
               

               
Conread position:
               
192-341
               

               
Cow position:
               
chr27:28472809-28472654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
196-398
               

               
Cow position:
               
chr27:20584435-20584638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
197-394
               

               
Cow position:
               
chr27:25152103-25151915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
200-347
               

               
Cow position:
               
chr27:15343262-15343407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
200-400
               

               
Cow position:
               
chr27:11561794-11561588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 34
               

               
Conread position:
               
203-400
               

               
Cow position:
               
chr27:12459300-12459102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
203-400
               

               
Cow position:
               
chr27:19509030-19508826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
205-400
               

               
Cow position:
               
chr27:26437105-26437306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 175
               

               
Conread position:
               
208-399
               

               
Cow position:
               
chr27:31210558-31210365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 50
               

               
Conread position:
               
226-391
               

               
Cow position:
               
chr27:27673022-27673191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 154
               

               
Conread position:
               
226-400
               

               
Cow position:
               
chr27:8790747-8790930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
229-400
               

               
Cow position:
               
chr27:6319910-6319737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
231-399
               

               
Cow position:
               
chr27:6241202-6241378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
232-394
               

               
Cow position:
               
chr27:30489422-30489591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
234-398
               

               
Cow position:
               
chr27:29319396-29319229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
234-400
               

               
Cow position:
               
chr27:31386644-31386816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
235-394
               

               
Cow position:
               
chr27:788812-788977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
243-400
               

               
Cow position:
               
chr27:18435156-18435316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
9, 150
               

               
Conread position:
               
254-400
               

               
Cow position:
               
chr27:6106665-6106518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
254-400
               

               
Cow position:
               
chr27:19452967-19452813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
266-389
               

               
Cow position:
               
chr27:22268178-22268053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
269-384
               

               
Cow position:
               
chr27:17918767-17918890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 0
               
Show alignments to all cow chromosomes.