Cow genome map

Conread name: rpigcb_10277.y1

Conread position: 1-383
Cow position:
Alignm length: 384
Alignm identity: 240
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 60

Conread position: 4-381
Cow position:
Alignm length: 380
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 67

Conread position: 5-380
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 5-381
Cow position:
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 12

Conread position: 5-383
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 5-383
Cow position:
Alignm length: 381
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 12

Conread position: 6-377
Cow position:
Alignm length: 386
Alignm identity: 250
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 75

Conread position: 6-377
Cow position:
Alignm length: 373
Alignm identity: 233
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 81

Conread position: 6-381
Cow position:
Alignm length: 377
Alignm identity: 239
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 96, 80

Conread position: 6-382
Cow position:
Alignm length: 378
Alignm identity: 239
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 177, 149

Conread position: 6-383
Cow position:
Alignm length: 378
Alignm identity: 235
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 8-323
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 8-383
Cow position:
Alignm length: 379
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 9

Conread position: 8-385
Cow position:
Alignm length: 379
Alignm identity: 236
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 84

Conread position: 11-234
Cow position:
Alignm length: 224
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 11-237
Cow position:
Alignm length: 229
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 109, 79

Conread position: 11-296
Cow position:
Alignm length: 288
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 67

Conread position: 11-370
Cow position:
Alignm length: 361
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 68

Conread position: 11-376
Cow position:
Alignm length: 368
Alignm identity: 230
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 177, 185

Conread position: 11-376
Cow position:
Alignm length: 367
Alignm identity: 240
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 321, 329

Conread position: 11-377
Cow position:
Alignm length: 367
Alignm identity: 229
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 11-378
Cow position:
Alignm length: 369
Alignm identity: 239
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 86, 72

Conread position: 11-381
Cow position:
Alignm length: 374
Alignm identity: 245
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 84, 74

Conread position: 11-381
Cow position:
Alignm length: 371
Alignm identity: 241
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 11-381
Cow position:
Alignm length: 375
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 79

Conread position: 11-381
Cow position:
Alignm length: 374
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 79, 28

Conread position: 11-381
Cow position:
Alignm length: 371
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-382
Cow position:
Alignm length: 373
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 84

Conread position: 11-385
Cow position:
Alignm length: 376
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 226

Conread position: 11-386
Cow position:
Alignm length: 378
Alignm identity: 242
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 69

Conread position: 12-234
Cow position:
Alignm length: 223
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 12-366
Cow position:
Alignm length: 357
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 25

Conread position: 12-383
Cow position:
Alignm length: 375
Alignm identity: 238
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 111, 97

Conread position: 13-330
Cow position:
Alignm length: 320
Alignm identity: 200
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 165, 172

Conread position: 13-376
Cow position:
Alignm length: 369
Alignm identity: 227
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 5, 11

Conread position: 13-381
Cow position:
Alignm length: 375
Alignm identity: 230
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 29

Conread position: 14-329
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 251

Conread position: 14-329
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 150, 170

Conread position: 14-377
Cow position:
Alignm length: 364
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 14-378
Cow position:
Alignm length: 365
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 14-381
Cow position:
Alignm length: 369
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 315, 326

Conread position: 14-381
Cow position:
Alignm length: 369
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 81

Conread position: 14-381
Cow position:
Alignm length: 370
Alignm identity: 239
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 89, 54

Conread position: 14-381
Cow position:
Alignm length: 371
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 66, 78

Conread position: 14-381
Cow position:
Alignm length: 370
Alignm identity: 245
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 149, 158

Conread position: 14-381
Cow position:
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 256

Conread position: 14-381
Cow position:
Alignm length: 369
Alignm identity: 238
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 231, 252

Conread position: 14-383
Cow position:
Alignm length: 374
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 93

Conread position: 14-383
Cow position:
Alignm length: 372
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 318

Conread position: 14-384
Cow position:
Alignm length: 373
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 73

Conread position: 14-385
Cow position:
Alignm length: 373
Alignm identity: 233
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 54

Conread position: 15-215
Cow position:
Alignm length: 201
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-381
Cow position:
Alignm length: 372
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 80

Conread position: 15-381
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 70

Conread position: 15-381
Cow position:
Alignm length: 368
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 78

Conread position: 15-385
Cow position:
Alignm length: 373
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 83, 69

Conread position: 15-385
Cow position:
Alignm length: 371
Alignm identity: 223
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 15-386
Cow position:
Alignm length: 372
Alignm identity: 239
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 16-291
Cow position:
Alignm length: 278
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 53

Conread position: 16-330
Cow position:
Alignm length: 317
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 77, 53

Conread position: 16-380
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 250

Conread position: 16-381
Cow position:
Alignm length: 367
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 85, 63

Conread position: 16-381
Cow position:
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 72

Conread position: 16-383
Cow position:
Alignm length: 370
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 156

Conread position: 16-386
Cow position:
Alignm length: 373
Alignm identity: 247
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 170, 153

Conread position: 16-386
Cow position:
Alignm length: 373
Alignm identity: 230
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 86, 14

Conread position: 17-248
Cow position:
Alignm length: 233
Alignm identity: 154
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 148, 167

Conread position: 17-316
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 112, 250

Conread position: 17-323
Cow position:
Alignm length: 310
Alignm identity: 203
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 169, 146

Conread position: 17-328
Cow position:
Alignm length: 315
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 61

Conread position: 17-375
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 146, 155

Conread position: 17-377
Cow position:
Alignm length: 362
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 244, 233

Conread position: 17-377
Cow position:
Alignm length: 362
Alignm identity: 235
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 351, 0

Conread position: 17-380
Cow position:
Alignm length: 365
Alignm identity: 241
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 238, 250

Conread position: 17-380
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 63, 71

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 75, 81

Conread position: 17-381
Cow position:
Alignm length: 368
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 61

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 249

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 219

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 242
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 159, 147

Conread position: 17-381
Cow position:
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 336, 330

Conread position: 17-381
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 91, 81

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 233
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 76, 68

Conread position: 17-381
Cow position:
Alignm length: 368
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 146, 155

Conread position: 17-381
Cow position:
Alignm length: 367
Alignm identity: 229
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 149

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 239
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 17-381
Cow position:
Alignm length: 365
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 17-383
Cow position:
Alignm length: 367
Alignm identity: 236
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 17-384
Cow position:
Alignm length: 369
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 157, 167

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 17-386
Cow position:
Alignm length: 375
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 55, 62

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 146, 155

Conread position: 17-386
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 68, 76

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 232
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 336, 322

Conread position: 17-386
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 54

Conread position: 17-386
Cow position:
Alignm length: 373
Alignm identity: 225
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 126

Conread position: 17-386
Cow position:
Alignm length: 373
Alignm identity: 240
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 32

Conread position: 17-386
Cow position:
Alignm length: 374
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 61

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 243
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 161, 169

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 235
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 253, 248

Conread position: 17-386
Cow position:
Alignm length: 371
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 336, 322

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 58

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 234
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 84, 75

Conread position: 17-386
Cow position:
Alignm length: 374
Alignm identity: 240
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 65, 71

Conread position: 17-386
Cow position:
Alignm length: 372
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 150

Conread position: 18-383
Cow position:
Alignm length: 368
Alignm identity: 235
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 72, 63

Conread position: 19-381
Cow position:
Alignm length: 363
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 21-379
Cow position:
Alignm length: 359
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 23-381
Cow position:
Alignm length: 360
Alignm identity: 226
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 330, 309

Conread position: 23-386
Cow position:
Alignm length: 367
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 57, 61

Conread position: 23-386
Cow position:
Alignm length: 368
Alignm identity: 239
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 157, 163

Conread position: 23-386
Cow position:
Alignm length: 369
Alignm identity: 240
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 133, 145

Conread position: 26-381
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 67, 53

Conread position: 26-386
Cow position:
Alignm length: 366
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 72, 52

Conread position: 27-378
Cow position:
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 27-381
Cow position:
Alignm length: 355
Alignm identity: 226
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 27-381
Cow position:
Alignm length: 357
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 122, 139

Conread position: 27-386
Cow position:
Alignm length: 361
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 305, 313

Conread position: 27-386
Cow position:
Alignm length: 362
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 304, 313

Conread position: 27-386
Cow position:
Alignm length: 360
Alignm identity: 219
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 27-386
Cow position:
Alignm length: 360
Alignm identity: 217
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 28-386
Cow position:
Alignm length: 361
Alignm identity: 235
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 152, 158

Conread position: 29-381
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 134, 143

Conread position: 29-381
Cow position:
Alignm length: 354
Alignm identity: 235
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 295, 321

Conread position: 35-376
Cow position:
Alignm length: 344
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 59-376
Cow position:
Alignm length: 320
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 193, 175

Conread position: 62-386
Cow position:
Alignm length: 327
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 34

Conread position: 107-328
Cow position:
Alignm length: 222
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 117-377
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 135, 120

Conread position: 127-377
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 136, 113

Conread position: 180-384
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 5

Conread position: 201-386
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 46, 65

Show alignments to all cow chromosomes.